Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0012765 PREDICTED: uncharacterized protein LOC102580155 [Solanum tuberosum] Contig363 - View
CSS0030494 hypothetical protein POPTR_0012s14410g [Populus trichocarpa] Chr1 - View
CSS0045573 hypothetical protein POPTR_0003s11470g [Populus trichocarpa] Chr14 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G360 LG-2 + View
Acer truncatum Atru.chr1.647 chr1 + View
Acer truncatum Atru.chr9.1433 chr9 + View
Acer truncatum Atru.chr5.298 chr5 + View
Actinidia chinensis Actinidia12254 Lachesis_group25 - View
Actinidia chinensis Actinidia31403 Lachesis_group0 - View
Actinidia chinensis Actinidia02090 Lachesis_group23 - View
Actinidia chinensis Actinidia14464 Lachesis_group6 - View
Arabidopsis lyrata AL2G12920 scaffold_2 - View
Arabidopsis lyrata AL1G23650 scaffold_1 + View
Arabidopsis lyrata AL5G43080 scaffold_5 + View
Avicennia marina MSTRG.13786 ScioBoG_18778_HRSCAF_18863 + View
Avicennia marina MSTRG.12060 ScioBoG_17730_HRSCAF_17811 - View
Amaranthus hybridus Ah.12g058220 AmaHy_arrow1_Scaffold_12 - View
Aquilegia oxysepala Aqoxy7G00647 CHR07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.2KWP45 PF07279 - Protein of unknown function (DUF1442) (DUF1442) arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.X1N656 PTHR33593:SF2 - F5O11.5 arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q9XQ1F PTHR33593:SF2 - F5O11.5 arahy.Tifrunner.gnm1.Arahy.02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YD7H7P PTHR33593:SF2 - F5O11.5 arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.R64JTA PTHR33593:SF2 - F5O11.5 arahy.Tifrunner.gnm1.Arahy.12 + View
Arabidopsis thaliana AT1G12320 ankyrin repeat/KH domain protein (DUF1442) Protein of unknown function (DUF1442)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1442 (InterPro:IPR009902)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1442) (TAIR:AT1G62840.1)%3B Has 98 Blast hits to 98 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 98%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G62840 ankyrin repeat/KH domain protein (DUF1442) Protein of unknown function (DUF1442)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1442 (InterPro:IPR009902)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1442) (TAIR:AT1G12320.1)%3B Has 98 Blast hits to 97 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 98%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC07g41705 ChrC07 - View
Brassica carinata BcaB03g13195 ChrB03 - View
Brassica carinata BcaB08g34283 ChrB08 - View
Brassica napus C05p10830 C05 - View
Brassica napus A09p63900 A09 - View
Brassica napus A08p32890 A08 - View
Brassica napus A06p09260 A06 - View
Brassica oleracea BolC8t52284H C8 - View
Brassica oleracea BolC8t49165H C8 + View
Brassica oleracea BolC5t29827H C5 - View
Brassica oleracea BolC4t22255H C4 + View
Brassica rapa BraA06t24113Z A06 - View
Brassica rapa BraA09t41738Z A09 - View
Brassica rapa BraA08t35211Z A08 - View
Beta vulgaris EL10Ac3g05798 PF07279 - Protein of unknown function (DUF1442) (DUF1442) Chr3_EL10_PGA_scaffold7 + View
Capsicum annuum CAN.G630.81 PGAv.1.6.scaffold630 - View
Capsicum annuum CAN.G1394.33 PGAv.1.6.scaffold1394 + View
Cannabis sativa CANSAT21G2112 NC_044374.1 - View
Cannabis sativa CANSAT56G2473 NC_044371.1 + View
Cicer arietinum L. Ca_12280_v3 Ca_LG4_v3 + View
Cicer arietinum L. Ca_06690_v3 Ca_LG3_v3 - View
Corylus avellana Haze_09053 Protein of unknown function 4 - View
Corylus avellana Haze_13832 Protein of unknown function 5 + View
Coffea canephora Cc08_g13240 Protein of unknown function (DUF1442) chr8 + View
Citrus clementina Ciclev10023564m.g scaffold_3 + View
Citrus clementina Ciclev10006795m.g scaffold_9 - View
Citrus clementina Ciclev10022173m.g scaffold_3 + View
Ceratophyllum demersum CDE04G2902 2 + View
Carpinus fangiana Cfa012016 Cfa05 + View
Cardamine hirsuta CARHR012620 Protein of unknown function (DUF1442) Chr1 + View
Cardamine hirsuta CARHR048900 Protein of unknown function (DUF1442) Chr2 - View
Carya illinoinensis CiPaw.12G104900 PTHR33593//PTHR33593:SF2 - FAMILY NOT NAMED // F5O11.5 Chr12 - View
Carya illinoinensis CiPaw.01G262700 PTHR33593//PTHR33593:SF2 - FAMILY NOT NAMED // F5O11.5 Chr01 - View
Carya illinoinensis CiPaw.04G062300 PF07279 - Protein of unknown function (DUF1442) (DUF1442) Chr04 - View
Carya illinoinensis CiPaw.11G147400 PTHR33593:SF2 - F5O11.5 Chr11 - View
Citrullus lanatus ClCG01G003640 NAD(P)H-quinone oxidoreductase subunit 6 CG_Chr01 - View
Citrullus lanatus ClCG05G002310 NAD(P)H-quinone oxidoreductase subunit 6 CG_Chr05 - View
Cucumis melo MELO3C006193.2 Ankyrin repeat/KH domain protein (DUF1442) chr06 - View
Cucumis melo MELO3C005581.2 Ankyrin repeat/KH domain protein (DUF1442) chr09 + View
Corchorus olitorius COL.COLO4_23878 hypothetical protein AWUE01018369.1 - View
Carica papaya Cpa.g.sc3.280 supercontig_3 + View
Carica papaya Cpa.g.sc29.90 supercontig_29 - View
Chenopodium quinoa AUR62004208 Protein of unknown function C_Quinoa_Scaffold_4250 - View
Chenopodium quinoa AUR62017390 Protein of unknown function C_Quinoa_Scaffold_3489 - View
Capsella rubella Carub.0002s0214 PTHR33593:SF2 - F5O11.5 scaffold_2 - View
Cucumis sativus L. CsaV3_5G003760 S-adenosyl-L-methionine-dependent methyltransferase chr5 - View
Daucus carota DCAR_006801 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_014614 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_008456 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv39077 GWHABJS00000003 - View
Davidia involucrata Dinv28539 GWHABJS00000004 + View
Davidia involucrata Dinv43703 GWHABJS00000016 + View
Davidia involucrata Dinv22975 GWHABJS00000009 + View
Davidia involucrata Dinv37762 GWHABJS00000017 - View
Durio zibethinus Duzib084G0845 NW_019167827.1 + View
Durio zibethinus Duzib205G0200 NW_019168381.1 + View
Durio zibethinus Duzib084G0938 NW_019167827.1 + View
Durio zibethinus Duzib133G0877 NW_019167938.1 + View
Erigeron canadensis ECA240G0770 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA232G1804 Conyza_canadensis_scaffold:2 + View
Eucalyptus grandis Eucgr.E00474 Chr05 + View
Eucalyptus grandis Eucgr.D01988 Chr04 - View
Erythranthe guttata Migut.F00437 scaffold_6 + View
Erythranthe guttata Migut.A00835 scaffold_1 + View
Eutrema salsugineum Thhalv10023680m.g PTHR33593:SF2 - F5O11.5 scaffold_8 - View
Eutrema salsugineum Thhalv10008740m.g PTHR33593:SF2 - F5O11.5 scaffold_5 - View
Fragaria x ananassa FAN06G1534 PF07279 - Protein of unknown function (DUF1442) (DUF1442) Fvb7-2 + View
Fragaria x ananassa FAN10G1623 PTHR33593//PTHR33593:SF2 - FAMILY NOT NAMED // F5O11.5 Fvb7-1 + View
Fragaria x ananassa FAN06G1922 PTHR33593:SF2 - F5O11.5 Fvb7-2 + View
Fragaria x ananassa FAN06G0314 PTHR33593:SF2 - F5O11.5 Fvb7-2 + View
Fragaria x ananassa FAN10G1873 PTHR33593//PTHR33593:SF2 - FAMILY NOT NAMED // F5O11.5 Fvb7-1 + View
Fragaria x ananassa FAN06G0254 PF07279 - Protein of unknown function (DUF1442) (DUF1442) Fvb7-2 - View
Fragaria x ananassa FAN18G0187 PTHR33593:SF2 - F5O11.5 Fvb5-1 + View
Fragaria x ananassa FAN08G0269 PTHR33593//PTHR33593:SF2 - FAMILY NOT NAMED // F5O11.5 Fvb5-3 - View
Fragaria x ananassa FAN04G2759 PTHR33593:SF2 - F5O11.5 Fvb5-4 + View
Fragaria x ananassa FAN03G3446 PF07279 - Protein of unknown function (DUF1442) (DUF1442) Fvb7-3 + View
Fragaria x ananassa FAN01G0303 PTHR33593//PTHR33593:SF2 - FAMILY NOT NAMED // F5O11.5 Fvb7-4 - View
Fragaria x ananassa FAN13G0129 PTHR33593:SF2 - F5O11.5 Fvb5-2 + View
Fragaria x ananassa FAN03G2561 PTHR33593:SF2 - F5O11.5 Fvb7-3 - View
Fragaria vesca FvH4_5g00680 PTHR33593:SF2 - F5O11.5 Fvb5 + View
Fragaria vesca FvH4_7g28130 PF07279 - Protein of unknown function (DUF1442) (DUF1442) Fvb7 - View
Fragaria vesca FvH4_7g11620 PTHR33593//PTHR33593:SF2 - FAMILY NOT NAMED // F5O11.5 Fvb7 + View
Gossypium hirsutum Gohir.A12G221100 PTHR33593:SF2 - F5O11.5 A12 + View
Gossypium hirsutum Gohir.D03G158000 PTHR33593:SF2 - F5O11.5 D03 + View
Gossypium hirsutum Gohir.A08G134800 PF07279 - Protein of unknown function (DUF1442) (DUF1442) A08 + View
Gossypium hirsutum Gohir.A08G173800 PTHR33593:SF2 - F5O11.5 A08 + View
Gossypium hirsutum Gohir.A03G011850 PTHR33593:SF2 - F5O11.5 A03 - View
Gossypium hirsutum Gohir.D12G223400 PTHR33593:SF2 - F5O11.5 D12 + View
Gossypium hirsutum Gohir.D08G192500 PTHR33593:SF2 - F5O11.5 D08 + View
Glycine max Glyma.01G141100 PTHR33593:SF2 - F5O11.5 Gm01 + View
Glycine max Glyma.17G135100 PTHR33593:SF2 - F5O11.5 Gm17 + View
Glycine max Glyma.11G029700 PTHR33593:SF2 - F5O11.5 Gm11 - View
Glycine max Glyma.05G052800 PTHR33593:SF2 - F5O11.5 Gm05 + View
Glycine max Glyma.03G026000 PF07279 - Protein of unknown function (DUF1442) (DUF1442) Gm03 + View
Glycine max Glyma.16G205000 PF07279 - Protein of unknown function (DUF1442) (DUF1442) Gm16 + View
Glycine max Glyma.01G212100 PTHR33593:SF2 - F5O11.5 Gm01 + View
Gossypium raimondii Gorai.008G239700 Chr08 + View
Gossypium raimondii Gorai.003G166500 Chr03 + View
Gossypium raimondii Gorai.004G202500 Chr04 + View
Helianthus annuus HanXRQChr17g0549081 Protein of unknown function (DUF1442) HanXRQChr17 + View
Helianthus annuus HanXRQChr06g0164091 Protein of unknown function (DUF1442) HanXRQChr06 - View
Hydrangea macrophylla Hma1.2p1_0138F.1_g063180 Hma1.2p1_0138F.1 - View
Lupinus albus Lalb_Chr03g0033171 PF07279 - Protein of unknown function (DUF1442) (DUF1442) Lalb_Chr03 + View
Lupinus albus Lalb_Chr05g0225401 PTHR33593//PTHR33593:SF2 - FAMILY NOT NAMED // F5O11.5 Lalb_Chr05 - View
Lupinus albus Lalb_Chr07g0189861 PF07279 - Protein of unknown function (DUF1442) (DUF1442) Lalb_Chr07 + View
Lotus japonicus Lj2g0025913 PTHR33593//PTHR33593:SF2 - FAMILY NOT NAMED // F5O11.5 chr2 - View
Lotus japonicus Lj4g0015001 PTHR33593:SF2 - F5O11.5 chr4 + View
Lonicera japonica Lj2P208T18 GWHAAZE00000002 - View
Lonicera japonica Lj7P529T39 GWHAAZE00000007 - View
Lactuca sativa Lsat_1_v5_gn_3_3901 Lsat_1_v8_lg_3 + View
Magnolia biondii MBI12_g34007_MAGBIO AED:0.10 Chr12 + View
Magnolia biondii MBI04_g30220_MAGBIO AED:0.08 Chr04 + View
Malus domestica MD07G1257300 Protein of unknown function (DUF1442) Chr07 - View
Malus domestica MD01G1185000 Protein of unknown function (DUF1442) Chr01 - View
Manihot esculenta Manes.02G033500 Chromosome02 - View
Manihot esculenta Manes.01G073600 Chromosome01 - View
Manihot esculenta Manes.14G033400 Chromosome14 + View
Manihot esculenta Manes.05G046300 Chromosome05 + View
Manihot esculenta Manes.06G137300 Chromosome06 - View
Medicago truncatula Medtr4g102220 DUF1442 family protein chr4 - View
Medicago truncatula Medtr5g011800 DUF1442 family protein chr5 - View
Nelumbo nucifera Nn1g01254 chr1 + View
Nelumbo nucifera Nn4g26376 chr4 + View
Nicotiana tabacum Nitab4.5_0000457g0200 Protein of unknown function DUF1442 Nitab4.5_0000457 + View
Nicotiana tabacum Nitab4.5_0001816g0190 Protein of unknown function DUF1442 Nitab4.5_0001816 - View
Nicotiana tabacum Nitab4.5_0001265g0010 Protein of unknown function DUF1442 Nitab4.5_0001265 + View
Nicotiana tabacum Nitab4.5_0003534g0040 Protein of unknown function DUF1442 Nitab4.5_0003534 + View
Olea europaea Oeu025562.1 chr4 - View
Olea europaea Oeu040236.2 chr19 - View
Petunia axillaris Peaxi162Scf00271g00117 Protein of unknown function (DUF1442) Peaxi162Scf00271 + View
Petunia axillaris Peaxi162Scf00102g00124 Protein of unknown function (DUF1442) Peaxi162Scf00102 + View
Petunia axillaris Peaxi162Scf00013g00335 conserved hypothetical protein Peaxi162Scf00013 - View
Punica granatum PGR031G3043 NC_045127.1 + View
Punica granatum PGR042G0021 NC_045130.1 + View
Prunus persica Prupe.2G281500 PF07279 - Protein of unknown function (DUF1442) (DUF1442) Pp02 - View
Prunus persica Prupe.2G144100 PTHR33593:SF2 - F5O11.5 Pp02 + View
Prunus persica Prupe.5G079600 PTHR33593:SF2 - F5O11.5 Pp05 + View
Pisum sativum Psat2g179520 Protein of unknown function (DUF1442) chr2LG1 + View
Pisum sativum Psat4g068720 Protein of unknown function (DUF1442) chr4LG4 - View
Papaver somniferum PSO478G3115 NC_039361.1 + View
Populus trichocarpa Potri.002G147100 PTHR33593:SF2 - F5O11.5 Chr02 + View
Populus trichocarpa Potri.003G115200 PTHR33593:SF2 - F5O11.5 Chr03 + View
Populus trichocarpa Potri.001G117600 PTHR33593:SF2 - F5O11.5 Chr01 - View
Populus trichocarpa Potri.014G068900 PTHR33593:SF2 - F5O11.5 Chr14 + View
Phaseolus vulgaris Phvul.002G060000 PTHR33593:SF2 - F5O11.5 Chr02 - View
Phaseolus vulgaris Phvul.003G214900 PTHR33593:SF2 - F5O11.5 Chr03 + View
Quercus lobata QL08p052623 8 + View
Quercus lobata QL12p015015 12 + View
Rosa chinensis RcHm_v2.0_Chr1g0375051 RcHm_v2.0_Chr1 - View
Rosa chinensis RcHm_v2.0_Chr1g0350051 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim07G0028100 chr07 - View
Striga asiatica SGA_v2.0_scaffold120G32814 scaffold120 - View
Striga asiatica SGA_v2.0_scaffold146G36183 scaffold146 + View
Salvia bowleyana SalBow4G0114 GWHASIU00000008 + View
Salix brachista Sabra03G0079800 GWHAAZH00000003 + View
Salix brachista Sabra15G0143800 GWHAAZH00000015 - View
Salix brachista Sabra14G0048600 GWHAAZH00000014 + View
Salix brachista Sabra01G0090300 GWHAAZH00000001 - View
Salix brachista Sabra02G0114600 GWHAAZH00000002 + View
Simmondsia chinensis Sc01g0009220 GWHAASQ00000001 - View
Simmondsia chinensis Sc02g0002630 GWHAASQ00000002 + View
Sechium edule Sed0012711 LG01 - View
Sechium edule Sed0001167 LG05 - View
Sechium edule Sed0016867 LG12 - View
Solanum lycopersicum Solyc01g091250.3 DUF1442 domain-containing protein (AHRD V3.3 *** A0A1Q3BAQ3_CEPFO) SL4.0ch01 - View
Solanum lycopersicum Solyc08g007480.2 Ankyrin repeat/KH domain protein (DUF1442) (AHRD V3.3 *** O22136_ARATH) SL4.0ch08 + View
Solanum lycopersicum Solyc03g083490.3 DUF1442 domain-containing protein (AHRD V3.3 *** A0A1Q3BAQ3_CEPFO) SL4.0ch03 + View
Solanum lycopersicum Solyc08g079480.3 Ankyrin repeat/KH domain protein (DUF1442) (AHRD V3.3 *** O22136_ARATH) SL4.0ch08 + View
Schrenkiella parvula Sp2g01770 PTHR33593:SF2 - F5O11.5 ch2-1 - View
Schrenkiella parvula Sp1g10940 PTHR33593//PTHR33593:SF2 - FAMILY NOT NAMED // F5O11.5 ch1-1 + View
Solanum pennellii Sopen01g037000 Protein of unknown function (DUF1442) | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1442 | BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1442) Spenn-ch01 - View
Solanum pennellii Sopen08g027850 Protein of unknown function (DUF1442) | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1442 | BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1442) Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG402025958 Conserved gene of unknown function ST4.03ch01 - View
Solanum tuberosum PGSC0003DMG400003957 Conserved gene of unknown function ST4.03ch08 + View
Selenicereus undatus Hund11564 Scaffold_10417 - View
Selenicereus undatus Hund14652 Scaffold_33677 + View
Trochodendron aralioides TAR629G2900 group0 + View
Theobroma cacao Thecc.01G377600 Uncharacterized protein Chromosome_1 + View
Theobroma cacao Thecc.03G261900 Ankyrin repeat and KH domain-containing protein 1 Chromosome_3 + View
Theobroma cacao Thecc.03G160700 Chromosome_3 - View
Tarenaya hassleriana THA.LOC104809445 uncharacterized protein LOC104809445 NW_010965019.1 - View
Trifolium pratense TPR.G19568 Tp57577_TGAC_v2_LG2 + View
Trifolium pratense TPR.G37668 Tp57577_TGAC_v2_LG5 + View
Tripterygium wilfordii TWI59G1418 NC_052248.1 + View
Tripterygium wilfordii TWI81G0356 NC_052251.1 - View
Tripterygium wilfordii TWI14G1094 NC_052249.1 - View
Vigna mungo VMungo1215G1481 CM024074.1 - View
Vigna mungo VMungo1215G3383 CM024074.1 - View
Vitis vinifera GSVIVG01004910001 chr2 - View
Vitis vinifera GSVIVG01018534001 chr16 - View
Vitis vinifera GSVIVG01027632001 chr15 + View