Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0016055 PREDICTED: pentatricopeptide repeat-containing protein At3g29230 [Vitis vinifera] Chr2 + View
CSS0039582 PREDICTED: putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial [Vitis vinifera] Chr12 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.BG.209.p chr8 + View
Actinidia chinensis Actinidia28632 Lachesis_group12 - View
Arabidopsis lyrata AL5G13690 scaffold_5 + View
Arabidopsis lyrata AL2G27960 scaffold_2 + View
Aquilegia oxysepala Aqoxy3G03765 CHR03 + View
Arabidopsis thaliana AT2G03880 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G24000.1)%3B Has 41924 Blast hits to 14587 proteins in 276 species: Archae - 3%3B Bacteria - 26%3B Metazoa - 84%3B Fungi - 128%3B Plants - 40967%3B Viruses - 0%3B Other Eukaryotes - 716 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT1G68930 pentatricopeptide (PPR) repeat-containing protein pentatricopeptide (PPR) repeat-containing protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1)%3B Has 47331 Blast hits to 14466 proteins in 272 species: Archae - 2%3B Bacteria - 18%3B Metazoa - 110%3B Fungi - 135%3B Plants - 46381%3B Viruses - 0%3B Other Eukaryotes - 685 (source: NCBI BLink). Chr1 + View
Amborella trichopoda ATR0064G117 AmTr_v1.0_scaffold00110 + View
Brassica carinata BcaC08g46358 ChrC08 - View
Brassica carinata BcaB03g15452 ChrB03 + View
Brassica carinata BcaC06g31140 ChrC06 - View
Brassica carinata BcaC01g02431 ChrC01 - View
Brassica napus C06p40890 C06 - View
Brassica napus C07p34260 C07 + View
Brassica napus A06p42820 A06 - View
Brassica oleracea BolC2t08628H C2 + View
Brassica oleracea BolC7t43955H C7 + View
Brassica oleracea BolC6t39344H C6 + View
Brassica rapa BraA06t27194Z A06 - View
Brassica rapa BraA07t31128Z A07 + View
Cicer arietinum L. Ca_04854_v3 Ca_LG2_v3 - View
Coffea canephora Cc11_g11370 Putative pentatricopeptide repeat-containing protein At1g68930 chr11 + View
Cardamine hirsuta CARHR146270 Pentatricopeptide repeat-containing protein Chr5 + View
Carya illinoinensis CiPaw.05G128100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr05 - View
Citrullus lanatus ClCG05G023420 Pentatricopeptide repeat-containing family protein CG_Chr05 + View
Citrullus lanatus ClCG01G007280 Pentatricopeptide repeat-containing protein CG_Chr01 + View
Cucumis melo MELO3C012176.2 Pentatricopeptide repeat-containing protein chr10 + View
Chenopodium quinoa AUR62007847 PCMP-H22: Putative pentatricopeptide repeat-containing protein At1g68930 C_Quinoa_Scaffold_2646 + View
Capsella rubella Carub.0002s1557 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_2 + View
Capsella rubella Carub.0005s0303 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_5 + View
Capsella rubella Carub.0002s1595 PF13041 - PPR repeat family (PPR_2) scaffold_2 + View
Cucumis sativus L. CsaV3_5G018730 pentatricopeptide repeat-containing protein At3g14730-like chr5 + View
Cucumis sativus L. CsaV3_5G033590 Pentatricopeptide repeat-containing protein chr5 - View
Davidia involucrata Dinv20152 GWHABJS00000018 + View
Davidia involucrata Dinv15570 GWHABJS00000018 + View
Davidia involucrata Dinv38764 GWHABJS00000019 - View
Durio zibethinus Duzib251G0862 NW_019167971.1 + View
Erigeron canadensis ECA246G4991 Conyza_canadensis_scaffold:8 - View
Eutrema salsugineum Thhalv10019580m.g PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) scaffold_9 - View
Eutrema salsugineum Thhalv10019713m.g PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_9 - View
Eutrema salsugineum Thhalv10005541m.g PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_6 - View
Gossypium hirsutum Gohir.A13G089100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A13 - View
Glycine max Glyma.09G232200 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm09 - View
Glycine max Glyma.20G023100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm20 + View
Glycine max Glyma.07G226200 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Gm07 + View
Gossypium raimondii Gorai.009G329600 Chr09 - View
Lotus japonicus Lj2g0018360 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) chr2 - View
Lonicera japonica Lj3P1032T41 GWHAAZE00000003 - View
Lonicera japonica Lj3C1026T2 GWHAAZE00000003 + View
Lonicera japonica Lj6P782T38 GWHAAZE00000006 + View
Malus domestica MD09G1077700 Pentatricopeptide repeat (PPR) superfamily protein Chr09 - View
Malus domestica MD13G1054800 pentatricopeptide (PPR) repeat-containing protein Chr13 + View
Malus domestica MD16G1053700 pentatricopeptide (PPR) repeat-containing protein Chr16 + View
Manihot esculenta Manes.05G112800 Chromosome05 + View
Nelumbo nucifera Nn4g23581 chr4 - View
Olea europaea Oeu048112.5 chr12 - View
Olea europaea Oeu054869.1 chr6 - View
Oryza sativa ssp. japonica Os04g0463800 Pentatricopeptide repeat domain containing protein. chr04 - View
Petunia axillaris Peaxi162Scf00188g00083 Pentatricopeptide repeat-containing protein Peaxi162Scf00188 + View
Punica granatum PGR119G1655 NC_045132.1 - View
Punica granatum PGR119G0008 NC_045132.1 - View
Punica granatum PGR102G3199 NC_045129.1 - View
Papaver somniferum PSO782G1263 NC_039365.1 - View
Populus trichocarpa Potri.010G161800 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr10 - View
Populus trichocarpa Potri.015G047600 PF01535//PF12854//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr15 + View
Populus trichocarpa Potri.008G092900 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr08 + View
Salix brachista Sabra10G0123000 GWHAAZH00000010 - View
Salix brachista Sabra08G0069700 GWHAAZH00000008 + View
Simmondsia chinensis Sc11g0002180 GWHAASQ00000011 + View
Simmondsia chinensis Sc04g0008070 GWHAASQ00000004 - View
Sechium edule Sed0022870 LG11 + View
Schrenkiella parvula Sp5g24070 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch5-6 + View
Schrenkiella parvula Sp2g14680 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch2-4 + View
Tarenaya hassleriana THA.LOC104821986 putative pentatricopeptide repeat-containing protein At1g68930 NW_010966617.1 + View
Utricularia gibba unitig_748.g7901 unitig_748 - View
Vaccinium macrocarpon vmacro10469 Similar to PCMP-H24: Pentatricopeptide repeat-containing protein At4g02750 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro01293 Similar to PCMP-H14: Putative pentatricopeptide repeat-containing protein At5g40405 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G0450 CM024069.1 + View