Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0016881 PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Vitis vinifera] Chr10 + View
CSS0034438 PREDICTED: 40S ribosomal protein S17-like isoform X1 [Solanum tuberosum] Contig40 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr12.1054_Atru.chr12.1055 chr12 + View
Actinidia chinensis Actinidia05418 Lachesis_group5 + View
Actinidia chinensis Actinidia34714 Lachesis_group6 + View
Actinidia chinensis Actinidia06170 Lachesis_group20 + View
Avicennia marina MSTRG.19377 ScioBoG_25048_HRSCAF_25167 - View
Aquilegia oxysepala Aqoxy1G00644 CHR01 - View
Amborella trichopoda ATR0820G002 AmTr_v1.0_scaffold00040 - View
Brassica carinata BcaB02g08494 ChrB02 + View
Brassica napus C09p72090 C09 - View
Capsicum annuum CAN.G143.11 PGAv.1.6.scaffold143 + View
Cicer arietinum L. Ca_02213_v3 Ca_LG1_v3 + View
Corylus avellana Haze_03480 Similar to PCMP-H35: Putative pentatricopeptide repeat-containing protein At5g09950 (Arabidopsis thaliana OX%3D3702) 1 - View
Coffea canephora Cc02_g09520 40S ribosomal protein S17 chr2 + View
Carpinus fangiana Cfa010540 Cfa04 - View
Carya illinoinensis CiPaw.10G011000 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr10 + View
Carya illinoinensis CiPaw.14G034200 PF01535//PF12854//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr14 + View
Citrullus lanatus ClCG08G008360 Pentatricopeptide repeat protein 79 CG_Chr08 + View
Citrullus lanatus ClCG10G018590 40S ribosomal protein S17, putative CG_Chr10 - View
Cucumis melo MELO3C009509.2 40S ribosomal protein S17-like chr04 - View
Cucumis melo MELO3C024569.2 Pentatricopeptide repeat-containing family protein chr08 - View
Cucumis melo MELO3C019907.2 40S ribosomal protein S17 chr03 - View
Carica papaya Cpa.g.sc5.4 supercontig_5 - View
Carica papaya Cpa.g.sc33.158 supercontig_33 - View
Chenopodium quinoa AUR62034184 RPS17D: 40S ribosomal protein S17-4 C_Quinoa_Scaffold_2123 - View
Chenopodium quinoa AUR62034114 PCMP-H49: Pentatricopeptide repeat-containing protein At5g46460, mitochondrial C_Quinoa_Scaffold_2123 + View
Cucumis sativus L. CsaV3_6G004340 pentatricopeptide repeat-containing protein At5g04780 chr6 + View
Cucumis sativus L. CsaV3_3G037430 Pentatricopeptide repeat-containing protein chr3 + View
Daucus carota DCAR_020728 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv07590 GWHABJS00000009 + View
Davidia involucrata Dinv21193 GWHABJS00000021 - View
Davidia involucrata Dinv31464 GWHABJS00000004 - View
Durio zibethinus Duzib093G2072 NW_019167937.1 - View
Erigeron canadensis ECA238G0791 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA234G2770 Conyza_canadensis_scaffold:4 - View
Erigeron canadensis ECA240G2557 Conyza_canadensis_scaffold:5 - View
Eucalyptus grandis Eucgr.G02685 Chr07 - View
Gossypium hirsutum Gohir.D01G193600 PF01535//PF12854//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) D01 - View
Gossypium hirsutum Gohir.D10G204950 PF00076//PF01535//PF13041//PF14432 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D10 - View
Gossypium hirsutum Gohir.A01G204100 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) A01 - View
Gossypium raimondii Gorai.011G229900 Chr11 - View
Helianthus annuus HanXRQChr11g0341951 Probable ribosomal S17 family protein HanXRQChr11 - View
Lupinus albus Lalb_Chr25g0288131 K02962 - small subunit ribosomal protein S17e (RP-S17e, RPS17) Lalb_Chr25 - View
Lonicera japonica Lj3P925T51 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_2_105620 K02962 - small subunit ribosomal protein S17e (RP-S17e, RPS17) Lsat_1_v8_lg_2 + View
Lactuca sativa Lsat_1_v5_gn_8_24360 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_2_101380 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lsat_1_v8_lg_2 + View
Malus domestica MD14G1026500 Tetratricopeptide repeat (TPR)-like superfamily protein Chr14 + View
Malus domestica MD12G1028100 Tetratricopeptide repeat (TPR)-like superfamily protein Chr12 + View
Manihot esculenta Manes.08G026500 Chromosome08 + View
Medicago truncatula Medtr1g111670 pentatricopeptide (PPR) repeat protein chr1 - View
Medicago truncatula Medtr1g059720 organelle transcript processing protein, putative chr1 - View
Olea europaea Oeu033281.1 scaffold279 + View
Oryza sativa ssp. japonica Os05g0439300 Pentatricopeptide repeat domain containing protein. chr05 - View
Petunia axillaris Peaxi162Scf00519g00054 40S ribosomal protein S17 Peaxi162Scf00519 - View
Punica granatum PGR044G1880 NC_045134.1 - View
Punica granatum PGR142G0603 NC_045128.1 - View
Prunus persica Prupe.2G071000 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp02 - View
Papaver somniferum PSO384G0976 NC_039368.1 + View
Papaver somniferum PSO339G4131 NC_039366.1 - View
Populus trichocarpa Potri.008G017300 K02962 - small subunit ribosomal protein S17e (RP-S17e, RPS17) Chr08 + View
Populus trichocarpa Potri.010G241100 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr10 + View
Quercus lobata QL04p046945 4 + View
Rhododendron simsii Rhsim13G0113500 chr13 + View
Rhododendron simsii Rhsim03G0097000 chr03 - View
Rhododendron simsii Rhsim03G0072600 chr03 + View
Salvia bowleyana SalBow6G0550 GWHASIU00000002 - View
Salix brachista Sabra03G0003500 GWHAAZH00000003 - View
Salix brachista Sabra08G0010800 GWHAAZH00000008 + View
Salix brachista Sabra10G0188700 GWHAAZH00000010 + View
Simmondsia chinensis Sc09g0005190 GWHAASQ00000009 - View
Sechium edule Sed0002853 LG03 - View
Sequoiadendron giganteum SEGI_32457 chr6 + View
Solanum lycopersicum Solyc11g006690.1 40S ribosomal protein S17 (AHRD V3.3 *** A0A2G2VEQ4_CAPBA) SL4.0ch11 - View
Solanum pennellii Sopen11g002620 Ribosomal S17 family protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: ribosome, intracellular | EXPRESSED IN: male gametophyte, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Ribosomal protein S17e , Ribosomal protein S17e, conserved site | BEST Arabidopsis thaliana protein match is: Ribosomal S17 family protein Spenn-ch11 - View
Solanum pennellii Sopen05g033670 Ribosomal S17 family protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: ribosome, intracellular | EXPRESSED IN: male gametophyte, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Ribosomal protein S17e , Ribosomal protein S17e, conserved site | BEST Arabidopsis thaliana protein match is: Ribosomal S17 family protein Spenn-ch05 - View
Solanum tuberosum PGSC0003DMG400028243 40S ribosomal protein S17 ST4.03ch10 + View
Solanum tuberosum PGSC0003DMG400023394 40S ribosomal protein S17 ST4.03ch05 - View
Solanum tuberosum PGSC0003DMG400007598 Pentatricopeptide repeat-containing protein ST4.03ch11 + View
Selenicereus undatus Hund06793 Scaffold_33676 + View
Trochodendron aralioides TAR633G0434 group2 - View
Trochodendron aralioides TAR636G2966 group1 + View
Theobroma cacao Thecc.10G115300 Pentatricopeptide repeat (PPR) superfamily protein Chromosome_10 + View
Theobroma cacao Thecc.05G283500 Mitochondrial editing factor 20 Chromosome_5 + View
Theobroma cacao Thecc.10G102100 Pentatricopeptide repeat-containing protein Chromosome_10 + View
Tripterygium wilfordii TWI53G0411 NC_052244.1 - View
Tripterygium wilfordii TWI38G0516 NC_052252.1 - View
Tripterygium wilfordii TWI73G0656 NC_052232.1 + View
Vaccinium macrocarpon vmacro07265 Similar to PCMP-H32: Putative pentatricopeptide repeat-containing protein At3g23330 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro10286 Similar to PCMP-H13: Pentatricopeptide repeat-containing protein At4g14050, mitochondrial (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro10319 Similar to PCMP-H38: Pentatricopeptide repeat-containing protein At5g48910 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G0108 CM024071.1 - View
Vitis vinifera GSVIVG01034655001 chr13 + View