Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arabidopsis thaliana AT5G39910 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Parallel beta-helix repeat (InterPro:IPR006626)%2C Pectin lyase fold (InterPro:IPR012334)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G15720.1)%3B Has 3880 Blast hits to 3866 proteins in 466 species: Archae - 6%3B Bacteria - 1031%3B Metazoa - 13%3B Fungi - 1258%3B Plants - 1455%3B Viruses - 0%3B Other Eukaryotes - 117 (source: NCBI BLink). Chr5 - View
Brassica napus A04p12680 A04 - View
Brassica oleracea BolC4t26227H C4 - View
Brassica rapa BraA04t16925Z A04 - View
Coffea canephora Cc04_g15540 Putative Probable polygalacturonase At1g80170 chr4 - View
Cardamine hirsuta CARHR262260 Polygalacturonase-like protein Chr8 + View
Capsella rubella Carub.0007s3581 PTHR31375//PTHR31375:SF41 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN scaffold_7 + View
Cucumis sativus L. CsaV3_5G037890 Pectin lyase-like superfamily protein chr5 - View
Durio zibethinus Duzib147G0926 NW_019168470.1 + View
Eucalyptus grandis Eucgr.I01918 Chr09 + View
Erythranthe guttata Migut.I00126 scaffold_9 + View
Eutrema salsugineum Thhalv10028331m.g PTHR31375:SF41 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN scaffold_14 + View
Gossypium hirsutum Gohir.D09G020300 PTHR31375//PTHR31375:SF41 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN D09 - View
Gossypium hirsutum Gohir.A09G020800 PTHR31375//PTHR31375:SF41 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN A09 - View
Gossypium raimondii Gorai.006G023900 Chr06 + View
Lupinus albus Lalb_Chr07g0182291 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) Lalb_Chr07 - View
Lonicera japonica Lj5A115T73 GWHAAZE00000005 - View
Nicotiana tabacum Nitab4.5_0000785g0270 Parallel beta-helix repeat, Pectin lyase fold, Pectin lyase fold/virulence factor, Glycoside hydrolase, family 28 Nitab4.5_0000785 - View
Petunia axillaris Peaxi162Scf00009g00347 Pectin lyase-like superfamily protein Peaxi162Scf00009 - View
Punica granatum PGR142G1821 NC_045128.1 + View
Papaver somniferum PSO478G3363 NC_039361.1 - View
Papaver somniferum PSO832G1492 NC_039367.1 - View
Papaver somniferum PSO017G5901 NC_039362.1 + View
Quercus lobata QL02p080567 CM012294 + View
Simmondsia chinensis Sc04g0002430 GWHAASQ00000004 + View
Solanum lycopersicum Solyc03g113230.3 Pectin lyase-like superfamily protein (AHRD V3.3 *** F4I672_ARATH) SL4.0ch03 - View
Schrenkiella parvula Sp7g01790 PTHR31375//PTHR31375:SF41 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN ch7-1 - View
Solanum pennellii Sopen03g032290 Pectin lyase-like superfamily protein | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: plant-type cell wall | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Pectin lyase fold , Glycoside hydrolase, family 28 , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein Spenn-ch03 - View
Theobroma cacao Thecc.04G074500 Polygalacturonase-like protein Chromosome_4 + View
Vaccinium macrocarpon vmacro05735 Similar to At2g43860: Probable polygalacturonase At2g43860 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01008062001 chr17 + View