Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG3G10130 | LG-3 | - | View | |
Acer truncatum | Atru.chr2.2667 | chr2 | - | View | |
Acer truncatum | Atru.chr6.3003 | chr6 | + | View | |
Actinidia chinensis | Actinidia09677 | Lachesis_group5 | - | View | |
Actinidia chinensis | Actinidia09857 | Lachesis_group5 | + | View | |
Actinidia chinensis | Actinidia12815 | Lachesis_group19 | + | View | |
Actinidia chinensis | Actinidia05628 | Lachesis_group20 | - | View | |
Actinidia chinensis | Actinidia39457 | Lachesis_group17 | - | View | |
Arabidopsis lyrata | AL8G28720 | scaffold_8 | + | View | |
Avicennia marina | MSTRG.14363 | ScioBoG_18782_HRSCAF_18867 | + | View | |
Avicennia marina | MSTRG.6838 | ScioBoG_102840_HRSCAF_103099 | + | View | |
Avicennia marina | MSTRG.12914 | ScioBoG_17730_HRSCAF_17811 | + | View | |
Amaranthus hybridus | Ah.04g164920 | AmaHy_arrow1_Scaffold_4 | - | View | |
Aquilegia oxysepala | Aqoxy1G02474 | CHR01 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.0ZYF06 | PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED | arahy.Tifrunner.gnm1.Arahy.20 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.I8ASYK | PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED | arahy.Tifrunner.gnm1.Arahy.10 | + | View |
Amborella trichopoda | ATR0680G199 | AmTr_v1.0_scaffold00009 | + | View | |
Beta vulgaris | EL10Ac8g20376 | PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED | Chr8_EL10_PGA_scaffold4 | - | View |
Beta vulgaris | EL10Ac4g08148 | PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 | Chr4_EL10_PGA_scaffold1 | - | View |
Cannabis sativa | CANSAT56G0930 | NC_044371.1 | - | View | |
Corylus avellana | Haze_13153 | Similar to RMA1H1: E3 ubiquitin-protein ligase RMA1H1 (Capsicum annuum OX%3D4072) | 5 | - | View |
Corylus avellana | Haze_09414 | Similar to RMA3: E3 ubiquitin-protein ligase RMA3 (Arabidopsis thaliana OX%3D3702) | 4 | - | View |
Corylus avellana | Haze_06478 | Similar to RMA1H1: E3 ubiquitin-protein ligase RMA1H1 (Capsicum annuum OX%3D4072) | 2 | + | View |
Coffea canephora | Cc05_g12150 | Putative E3 ubiquitin-protein ligase RMA1H1 | chr5 | + | View |
Coffea canephora | Cc05_g07090 | E3 ubiquitin-protein ligase RMA1H1 | chr5 | - | View |
Citrus clementina | Ciclev10016469m.g | scaffold_2 | - | View | |
Citrus clementina | Ciclev10009229m.g | scaffold_1 | + | View | |
Carpinus fangiana | Cfa014606 | Cfa06 | - | View | |
Carpinus fangiana | Cfa020600 | Cfa08 | + | View | |
Carpinus fangiana | Cfa000436 | Cfa01 | - | View | |
Carya illinoinensis | CiPaw.11G168200 | PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 | Chr11 | - | View |
Carya illinoinensis | CiPaw.12G117400 | PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 | Chr12 | - | View |
Carya illinoinensis | CiPaw.10G048000 | PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED | Chr10 | - | View |
Citrullus lanatus | ClCG11G018130 | RING finger protein 185 | CG_Chr11 | + | View |
Citrullus lanatus | ClCG03G006000 | Ubiquitin ligase protein | CG_Chr03 | - | View |
Cucumis melo | MELO3C002598.2 | E3 ubiquitin-protein ligase RMA1H1-like | chr12 | + | View |
Cucumis melo | MELO3C016706.2 | E3 ubiquitin-protein ligase RMA3 | chr07 | - | View |
Corchorus olitorius | COL.COLO4_09408 | Zinc finger%2C RING-type | AWUE01014232.1 | + | View |
Corchorus olitorius | COL.COLO4_31483 | Zinc finger%2C RING-type | AWUE01020855.1 | + | View |
Carica papaya | Cpa.g.sc80.52 | supercontig_80 | - | View | |
Chenopodium quinoa | AUR62017010 | RMA1H1: E3 ubiquitin-protein ligase RMA1H1 | C_Quinoa_Scaffold_3787 | - | View |
Cucumis sativus L. | CsaV3_1G012230 | E3 ubiquitin-protein ligase RMA1H1-like | chr1 | - | View |
Cucumis sativus L. | CsaV3_4G033770 | E3 ubiquitin-protein ligase rma1h1-like protein | chr4 | + | View |
Daucus carota | DCAR_017146 | hypothetical protein | DCARv2_Chr5 | + | View |
Davidia involucrata | Dinv07555 | GWHABJS00000020 | + | View | |
Davidia involucrata | Dinv08303 | GWHABJS00000013 | - | View | |
Durio zibethinus | Duzib192G0678 | NW_019168037.1 | - | View | |
Durio zibethinus | Duzib248G0528 | NW_019168048.1 | + | View | |
Durio zibethinus | Duzib170G0669 | NW_019167871.1 | - | View | |
Durio zibethinus | Duzib213G0152 | NW_019167993.1 | - | View | |
Durio zibethinus | Duzib235G1451 | NW_019167982.1 | + | View | |
Eucalyptus grandis | Eucgr.D00626 | Chr04 | + | View | |
Eucalyptus grandis | Eucgr.E03315 | Chr05 | + | View | |
Erythranthe guttata | Migut.M00816 | scaffold_13 | + | View | |
Erythranthe guttata | Migut.H01931 | scaffold_8 | - | View | |
Eutrema salsugineum | Thhalv10014518m.g | PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 | scaffold_2 | - | View |
Fragaria x ananassa | FAN25G3867 | PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 | Fvb3-1 | + | View |
Fragaria x ananassa | FAN21G3819 | PF03330//PF13923 - Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_2) | Fvb3-2 | + | View |
Fragaria vesca | FvH4_3g09330 | PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED | Fvb3 | + | View |
Fragaria vesca | FvH4_3g20120 | PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 | Fvb3 | - | View |
Gossypium hirsutum | Gohir.D05G164800 | PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED | D05 | + | View |
Gossypium hirsutum | Gohir.D01G051600 | PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 | D01 | + | View |
Gossypium hirsutum | Gohir.A01G064500 | PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 | A01 | + | View |
Gossypium hirsutum | Gohir.A04G029100 | PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 | A04 | - | View |
Gossypium hirsutum | Gohir.D05G358100 | PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 | D05 | + | View |
Gossypium hirsutum | Gohir.A05G162000 | PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED | A05 | + | View |
Glycine max | Glyma.13G239500 | PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED | Gm13 | + | View |
Glycine max | Glyma.13G179900 | PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED | Gm13 | + | View |
Glycine max | Glyma.15G073700 | PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED | Gm15 | - | View |
Glycine max | Glyma.12G151200 | PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 | Gm12 | - | View |
Glycine max | Glyma.07G196000 | PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED | Gm07 | - | View |
Gossypium raimondii | Gorai.009G390700 | Chr09 | + | View | |
Gossypium raimondii | Gorai.002G071500 | Chr02 | + | View | |
Gossypium raimondii | Gorai.009G170000 | Chr09 | + | View | |
Lupinus albus | Lalb_Chr19g0134231 | PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 | Lalb_Chr19 | + | View |
Lupinus albus | Lalb_Chr25g0286461 | PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 | Lalb_Chr25 | + | View |
Lupinus albus | Lalb_Chr22g0356531 | PTHR12313//PTHR12313:SF5 - RNF5 // SUBFAMILY NOT NAMED | Lalb_Chr22 | - | View |
Lotus japonicus | Lj3g0017280 | PTHR12313//PTHR12313:SF5 - RNF5 // SUBFAMILY NOT NAMED | chr3 | + | View |
Lotus japonicus | Lj3g0009712 | PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 | chr3 | - | View |
Lotus japonicus | Lj6g0011812 | PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED | chr6 | + | View |
Lonicera japonica | Lj1P845T24 | GWHAAZE00000001 | + | View | |
Lonicera japonica | Lj8P156T32 | GWHAAZE00000008 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_9_96860 | Lsat_1_v8_lg_9 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_7_21121 | PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED | Lsat_1_v8_lg_7 | - | View |
Malus domestica | MD03G1226000 | RING membrane-anchor 1 | Chr03 | - | View |
Malus domestica | MD11G1245000 | RING membrane-anchor 1 | Chr11 | + | View |
Manihot esculenta | Manes.16G026800 | Chromosome16 | - | View | |
Manihot esculenta | Manes.15G086400 | Chromosome15 | - | View | |
Manihot esculenta | Manes.03G111400 | Chromosome03 | + | View | |
Manihot esculenta | Manes.17G045000 | Chromosome17 | - | View | |
Medicago truncatula | Medtr2g013550 | E3 ubiquitin-protein ligase RMA1H1-like protein | chr2 | - | View |
Medicago truncatula | Medtr2g090295 | E3 ubiquitin-protein ligase RMA1H1-like protein | chr2 | - | View |
Nelumbo nucifera | Nn1g04069 | chr1 | - | View | |
Nicotiana tabacum | Nitab4.5_0002383g0090 | Zinc finger, RING-type, Zinc finger, RING-type, conserved site, Zinc finger, RING/FYVE/PHD-type | Nitab4.5_0002383 | + | View |
Nicotiana tabacum | Nitab4.5_0003688g0070 | Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type | Nitab4.5_0003688 | - | View |
Nicotiana tabacum | Nitab4.5_0000207g0130 | Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-type, conserved site | Nitab4.5_0000207 | + | View |
Nicotiana tabacum | Nitab4.5_0000662g0220 | Zinc finger, RING-type, Zinc finger, RING-type, conserved site, Zinc finger, RING/FYVE/PHD-type | Nitab4.5_0000662 | - | View |
Olea europaea | Oeu019332.1 | chr5 | + | View | |
Petunia axillaris | Peaxi162Scf00027g00271 | RING membrane-anchor 3 | Peaxi162Scf00027 | + | View |
Petunia axillaris | Peaxi162Scf00069g01319 | expansin 12 | Peaxi162Scf00069 | - | View |
Petunia axillaris | Peaxi162Scf00000g04012 | RING/U-box superfamily protein | Peaxi162Scf00000 | + | View |
Punica granatum | PGR004G0207 | NC_045131.1 | + | View | |
Prunus persica | Prupe.4G046100 | Pp04 | - | View | |
Prunus persica | Prupe.4G183300 | PTHR12313:SF2 - E3 UBIQUITIN-PROTEIN LIGASE RMA3 | Pp04 | + | View |
Papaver somniferum | PSO210G2277 | NC_039359.1 | + | View | |
Papaver somniferum | PSO675G0566 | NC_039358.1 | - | View | |
Papaver somniferum | PSO541G3008 | NC_039363.1 | + | View | |
Papaver somniferum | PSO832G4164 | NC_039367.1 | + | View | |
Populus trichocarpa | Potri.011G051800 | PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED | Chr11 | - | View |
Populus trichocarpa | Potri.001G401600 | PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 | Chr01 | + | View |
Populus trichocarpa | Potri.004G042700 | PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED | Chr04 | - | View |
Populus trichocarpa | Potri.011G120800 | PTHR12313//PTHR12313:SF2 - RNF5 // E3 UBIQUITIN-PROTEIN LIGASE RMA3 | Chr11 | + | View |
Phaseolus vulgaris | Phvul.005G104200 | PTHR12313//PTHR12313:SF5 - RNF5 // SUBFAMILY NOT NAMED | Chr05 | + | View |
Phaseolus vulgaris | Phvul.006G185900 | PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED | Chr06 | + | View |
Phaseolus vulgaris | Phvul.002G228600 | PTHR12313//PTHR12313:SF6 - RNF5 // SUBFAMILY NOT NAMED | Chr02 | - | View |
Quercus lobata | QL08p020973 | 8 | - | View | |
Quercus lobata | QL08p038559 | 8 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr5g0033921 | RcHm_v2.0_Chr5 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr5g0008261 | RcHm_v2.0_Chr5 | - | View | |
Rhododendron simsii | Rhsim04G0020400 | chr04 | - | View | |
Striga asiatica | SGA_v2.0_scaffold73G24272 | scaffold73 | + | View | |
Striga asiatica | SGA_v2.0_scaffold34G13827 | scaffold34 | + | View | |
Salix brachista | Sabra16G0263600 | GWHAAZH00000016 | + | View | |
Salix brachista | Sabra11G0104800 | GWHAAZH00000011 | + | View | |
Salix brachista | Sabra11G0035600 | GWHAAZH00000011 | - | View | |
Salix brachista | Sabra13G0111700 | GWHAAZH00000013 | + | View | |
Salix brachista | Sabra04G0026500 | GWHAAZH00000004 | - | View | |
Simmondsia chinensis | Sc03g0009910 | GWHAASQ00000003 | - | View | |
Sechium edule | Sed0026724 | LG04 | + | View | |
Sechium edule | Sed0019527 | LG01 | - | View | |
Solanum lycopersicum | Solyc10g006960.3 | E3 ubiquitin-protein ligase rma1h1-like protein (AHRD V3.3 *** A0A2K3P2S4_TRIPR) | SL4.0ch10 | - | View |
Solanum lycopersicum | Solyc12g013800.3 | E3 ubiquitin-protein ligase rma1h1-like protein (AHRD V3.3 *** A0A2K3P2S4_TRIPR) | SL4.0ch12 | - | View |
Solanum lycopersicum | Solyc07g063200.3 | E3 ubiquitin-protein ligase rma1h1-like protein (AHRD V3.3 *** A0A2K3P2S4_TRIPR) | SL4.0ch07 | + | View |
Solanum pennellii | Sopen12g007110 | Encodes a RING finger E3 ubiquitin ligase. | RING membrane-anchor 3 (RMA3) | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING membrane-anchor 1 | Spenn-ch12 | - | View |
Solanum pennellii | Sopen07g031390 | Encodes a RING finger E3 ubiquitin ligase. | RING membrane-anchor 3 (RMA3) | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING membrane-anchor 1 | Spenn-ch07 | + | View |
Solanum pennellii | Sopen10g002870 | Encodes a RING finger E3 ubiquitin ligase. | RING membrane-anchor 3 (RMA3) | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING membrane-anchor 1 | Spenn-ch10 | - | View |
Solanum pennellii | Sopen02g023160 | Encodes a RING finger E3 ubiquitin ligase. | RING membrane-anchor 3 (RMA3) | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING membrane-anchor 1 | Spenn-ch02 | + | View |
Solanum tuberosum | PGSC0003DMG400025033 | Rnf5 | ST4.03ch10 | - | View |
Solanum tuberosum | PGSC0003DMG400015359 | Rnf5 | ST4.03ch12 | + | View |
Solanum tuberosum | PGSC0003DMG400029719 | Rnf5 | ST4.03ch02 | + | View |
Trochodendron aralioides | TAR629G1163 | group0 | - | View | |
Trochodendron aralioides | TAR626G1882 | group3 | - | View | |
Trochodendron aralioides | TAR627G1098 | group6 | + | View | |
Theobroma cacao | Thecc.06G188700 | RING membrane-anchor 1 | Chromosome_6 | + | View |
Theobroma cacao | Thecc.02G178700 | RING membrane-anchor 1 | Chromosome_2 | - | View |
Theobroma cacao | Thecc.07G082600 | RING membrane-anchor 3 | Chromosome_7 | - | View |
Tarenaya hassleriana | THA.LOC104799924 | E3 ubiquitin-protein ligase RMA3 | NW_010968712.1 | + | View |
Trifolium pratense | TPR.G31513 | Tp57577_TGAC_v2_scaf_724 | + | View | |
Trifolium pratense | TPR.G6439 | Tp57577_TGAC_v2_LG7 | + | View | |
Tripterygium wilfordii | TWI38G1286 | NC_052252.1 | + | View | |
Tripterygium wilfordii | TWI39G0858 | NC_052250.1 | - | View | |
Tripterygium wilfordii | TWI38G2339 | NC_052252.1 | - | View | |
Vaccinium macrocarpon | vmacro11850 | Similar to RMA1H1: E3 ubiquitin-protein ligase RMA1H1 (Capsicum annuum OX%3D4072) | chr11_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vigna mungo | VMungo0540G1060 | CM024075.1 | - | View | |
Vitis vinifera | GSVIVG01014361001 | chr19 | + | View |