Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G11670 LG-3 - View
Actinidia chinensis Actinidia07869 Lachesis_group19 + View
Amaranthus hybridus Ah.01g002630 Putative pentatricopeptide repeat-containing protein At5g09950 AmaHy_arrow1_Scaffold_1 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SB6WGL PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) arahy.Tifrunner.gnm1.Arahy.17 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.DRNV1B arahy.Tifrunner.gnm1.Arahy.01 - View
Arabidopsis thaliana AT5G55740 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a member of the E+ subgroup of the PPR protein family%2C containing the E and E+ motifs following a tandem array of PPR motifs. It also contains an unknown motif consisting of 15 aa%2C which is highly conserved in some PPR proteins%2C including CRR4. CRR21 is involved in RNA editing of the site 2 of ndhD (ndhD-2)%2Cwhich encodes a subunit of the NDH complex. The RNA editing changes aa 128 from Ser to Leu. Mutants have impaired NDH complex activity. chlororespiratory reduction 21 (CRR21)%3B INVOLVED IN: mRNA modification%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21300.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT2G04390 Ribosomal S17 family protein Ribosomal S17 family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic small ribosomal subunit%2C ribosome%2C nucleolus%2C plasma membrane%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein S17e (InterPro:IPR001210)%2C Ribosomal protein S17e%2C conserved site (InterPro:IPR018273)%3B BEST Arabidopsis thaliana protein match is: Ribosomal S17 family protein (TAIR:AT5G04800.4)%3B Has 1004 Blast hits to 1004 proteins in 349 species: Archae - 194%3B Bacteria - 0%3B Metazoa - 361%3B Fungi - 144%3B Plants - 127%3B Viruses - 0%3B Other Eukaryotes - 178 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB08g35932 ChrB08 - View
Brassica napus A07p06590 A07 - View
Brassica oleracea BolC9t57522H C9 - View
Beta vulgaris EL10Ac9g22706 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr9_EL10_PGA_scaffold8 + View
Cicer arietinum L. Ca_06391_v3 Ca_LG2_v3 - View
Corylus avellana Haze_12632 Similar to PCMP-H35: Putative pentatricopeptide repeat-containing protein At5g09950 (Arabidopsis thaliana OX%3D3702) 5 + View
Corylus avellana Haze_09849 Similar to PCMP-H38: Pentatricopeptide repeat-containing protein At5g48910 (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc05_g01410 Pentatricopeptide repeat-containing protein At4g21065 chr5 - View
Citrus clementina Ciclev10014482m.g scaffold_2 + View
Citrus clementina Ciclev10017893m.g scaffold_2 - View
Ceratophyllum demersum CDE04G3483 2 + View
Cardamine hirsuta CARHR184080 Pentatricopeptide repeat-containing protein Chr6 + View
Carya illinoinensis CiPaw.03G281400 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr03 - View
Cucumis melo MELO3C024197.2 Pentatricopeptide repeat-containing protein chr01 - View
Chenopodium quinoa AUR62017486 PCMP-E58: Pentatricopeptide repeat-containing protein At1g43980, mitochondrial C_Quinoa_Scaffold_3458 + View
Chenopodium quinoa AUR62015010 PCMP-H35: Putative pentatricopeptide repeat-containing protein At5g09950 C_Quinoa_Scaffold_2888 + View
Chenopodium quinoa AUR62029103 PCMP-H35: Putative pentatricopeptide repeat-containing protein At5g09950 C_Quinoa_Scaffold_1846 - View
Capsella rubella Carub.0008s1612 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_8 - View
Cucumis sativus L. CsaV3_7G002540 Pentatricopeptide repeat-containing protein, putative chr7 + View
Davidia involucrata Dinv26610 GWHABJS00000013 - View
Durio zibethinus Duzib138G1717 NW_019167893.1 + View
Erigeron canadensis ECA236G5063 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.H00881 Chr08 + View
Eutrema salsugineum Thhalv10012692m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_2 + View
Fragaria x ananassa FAN14G0288 PF01535//PF12854//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-1 + View
Fragaria x ananassa FAN05G5753 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-3 - View
Fragaria x ananassa FAN14G2631 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-1 - View
Fragaria vesca FvH4_6g40670 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6 + View
Fragaria vesca FvH4_3g42650 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb3 + View
Gossypium hirsutum Gohir.A11G149200 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A11 + View
Gossypium hirsutum Gohir.D11G156225 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D11 + View
Gossypium hirsutum Gohir.D07G171600 PF01535//PF12854//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D07 + View
Gossypium hirsutum Gohir.A07G164856 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A07 + View
Gossypium raimondii Gorai.007G166400 Chr07 + View
Gossypium raimondii Gorai.001G191900 Chr01 + View
Helianthus annuus HanXRQChr04g0126591 Probable tetratricopeptide repeat (TPR)-like superfamily protein HanXRQChr04 - View
Lonicera japonica Lj8P135T46 GWHAAZE00000008 - View
Lonicera japonica Lj1P892T36 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_7_97041 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lsat_1_v8_lg_7 + View
Malus domestica MD11G1035200 Tetratricopeptide repeat (TPR)-like superfamily protein Chr11 - View
Malus domestica MD09G1126300 Tetratricopeptide repeat (TPR)-like superfamily protein Chr09 - View
Malus domestica MD03G1030100 Pentatricopeptide repeat (PPR) superfamily protein Chr03 - View
Manihot esculenta Manes.12G065700 Chromosome12 - View
Nelumbo nucifera Nn1g07555 chr1 - View
Petunia axillaris Peaxi162Scf00802g00024 Pentatricopeptide repeat-containing protein Peaxi162Scf00802 + View
Punica granatum PGR083G1833 NC_045133.1 + View
Prunus persica Prupe.3G198300 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp03 + View
Papaver somniferum PSO675G2218 NC_039358.1 + View
Populus trichocarpa Potri.002G220600 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr02 - View
Quercus lobata QL08p003378 8 + View
Rosa chinensis RcHm_v2.0_Chr2g0156061 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim06G0176300 chr06 - View
Salvia bowleyana SalBow7G0437 GWHASIU00000005 - View
Salix brachista Sabra02G0167100 GWHAAZH00000002 - View
Sechium edule Sed0005756 LG05 + View
Solanum lycopersicum Solyc07g045500.1 Unknown protein SL4.0ch07 - View
Schrenkiella parvula Sp6g17650 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch6-6 - View
Solanum pennellii Sopen07g024040 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch07 - View
Theobroma cacao Thecc.01G195500 Tetratricopeptide repeat-like superfamily protein Chromosome_1 - View
Theobroma cacao Thecc.07G009500 Tetratricopeptide repeat-like superfamily protein Chromosome_7 + View
Tripterygium wilfordii TWI75G0089 NC_052253.1 + View
Vaccinium macrocarpon vmacro12085 Similar to PCMP-H35: Putative pentatricopeptide repeat-containing protein At5g09950 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View