Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0013943 PREDICTED: F-box protein At1g67340 [Nicotiana sylvestris] Chr10 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G9840 LG-7 - View
Acer truncatum Atru.chr11.2324 chr11 - View
Actinidia chinensis Actinidia20710 Lachesis_group12 - View
Actinidia chinensis Actinidia30648 Lachesis_group10 + View
Actinidia chinensis Actinidia08071 Lachesis_group15 - View
Actinidia chinensis Actinidia08870 Lachesis_group2 + View
Actinidia chinensis Actinidia09651 Lachesis_group16 + View
Arabidopsis lyrata AL2G25890 scaffold_2 + View
Arabidopsis lyrata AL8G24700 scaffold_8 - View
Avicennia marina MSTRG.504 ScioBoG_102831_HRSCAF_103044 + View
Avicennia marina MSTRG.2460 ScioBoG_102834_HRSCAF_103055 - View
Avicennia marina MSTRG.8003 ScioBoG_102841_HRSCAF_103114 - View
Avicennia marina MSTRG.13310 ScioBoG_18778_HRSCAF_18863 + View
Amaranthus hybridus Ah.03g136150 AmaHy_arrow1_Scaffold_3 + View
Amaranthus hybridus Ah.02g130910 F-box protein At1g67340 AmaHy_arrow1_Scaffold_2 + View
Aquilegia oxysepala Aqoxy5G03381 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1797GX PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.20 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JX210Q PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XA5S0H PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XT23Y2 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.10 + View
Arabidopsis thaliana AT5G50450 HCP-like superfamily protein with MYND-type zinc finger HCP-like superfamily protein with MYND-type zinc finger%3B FUNCTIONS IN: binding%2C zinc ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C MYND-type (InterPro:IPR002893)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%2C Sel1-like (InterPro:IPR006597)%3B BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein with MYND-type zinc finger (TAIR:AT1G67340.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT1G67340 HCP-like superfamily protein with MYND-type zinc finger HCP-like superfamily protein with MYND-type zinc finger%3B FUNCTIONS IN: binding%2C zinc ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: nucleus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C MYND-type (InterPro:IPR002893)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%2C Sel1-like (InterPro:IPR006597)%3B BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein with MYND-type zinc finger (TAIR:AT5G50450.1)%3B Has 623 Blast hits to 604 proteins in 167 species: Archae - 0%3B Bacteria - 161%3B Metazoa - 77%3B Fungi - 145%3B Plants - 151%3B Viruses - 2%3B Other Eukaryotes - 87 (source: NCBI BLink). Chr1 + View
Amborella trichopoda ATR0561G255 AmTr_v1.0_scaffold00013 - View
Brassica carinata BcaB03g15348 ChrB03 + View
Brassica carinata BcaB05g24270 ChrB05 + View
Brassica carinata BcaC03g14835 ChrC03 + View
Brassica napus C06p42920 C06 - View
Brassica napus A07p33940 A07 + View
Brassica napus C02p22950 C02 + View
Brassica oleracea BolC6t39146H C6 + View
Brassica oleracea BolC2t08439H C2 + View
Brassica rapa BraA07t31021Z A07 + View
Beta vulgaris EL10Ac6g13502 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Chr6_EL10_PGA_scaffold0 - View
Cannabis sativa CANSAT01G0790 NC_044373.1 + View
Cicer arietinum L. Ca_18028_v3 Ca_LG6_v3 + View
Cicer arietinum L. Ca_16459_v3 Ca_LG5_v3 + View
Corylus avellana Haze_07137 Similar to At1g67340: F-box protein At1g67340 (Arabidopsis thaliana OX%3D3702) 4 - View
Corylus avellana Haze_12419 Similar to At1g67340: F-box protein At1g67340 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc11_g16900 F-box protein At1g67340 chr11 - View
Citrus clementina Ciclev10031699m.g scaffold_4 + View
Citrus clementina Ciclev10020922m.g scaffold_3 - View
Ceratophyllum demersum CDE05G0615 3 - View
Ceratophyllum demersum CDE05G2068 3 + View
Carpinus fangiana Cfa018796 Cfa08 + View
Carpinus fangiana Cfa009370 Cfa03 - View
Cardamine hirsuta CARHR059880 F-box protein Chr2 + View
Carya illinoinensis CiPaw.06G102600 PF01753//PF08238 - MYND finger (zf-MYND) // Sel1 repeat (Sel1) Chr06 - View
Carya illinoinensis CiPaw.05G109800 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Chr05 + View
Carya illinoinensis CiPaw.11G007200 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Chr11 + View
Citrullus lanatus ClCG11G013670 Zinc finger family protein CG_Chr11 + View
Citrullus lanatus ClCG08G017150 Zinc finger family protein CG_Chr08 - View
Cucumis melo MELO3C010742.2 F-box protein At1g67340 chr03 - View
Cucumis melo MELO3C011866.2 F-box protein At1g67340 chr10 - View
Carica papaya Cpa.g.sc13.117 supercontig_13 + View
Chenopodium quinoa AUR62024110 At1g67340: F-box protein At1g67340 C_Quinoa_Scaffold_4119 + View
Chenopodium quinoa AUR62005620 At1g67340: F-box protein At1g67340 C_Quinoa_Scaffold_1214 - View
Capsella rubella Carub.0002s1363 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED scaffold_2 + View
Cucumis sativus L. CsaV3_2G025440 F-box protein chr2 + View
Cucumis sativus L. CsaV3_5G030280 F-box protein chr5 + View
Cucumis sativus L. CsaV3_1G000570 F-box protein At1g67340-like chr1 + View
Daucus carota DCAR_026465 hypothetical protein DCARv2_Chr8 - View
Davidia involucrata Dinv11171 GWHABJS00000006 - View
Davidia involucrata Dinv10956 GWHABJS00000008 - View
Davidia involucrata Dinv17563 GWHABJS00000018 + View
Durio zibethinus Duzib268G1458 NW_019168270.1 - View
Durio zibethinus Duzib205G1472 NW_019168381.1 - View
Durio zibethinus Duzib248G0049 NW_019168048.1 + View
Durio zibethinus Duzib251G0614 NW_019167971.1 - View
Erigeron canadensis ECA234G1125 Conyza_canadensis_scaffold:4 + View
Erigeron canadensis ECA233G4862 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA246G4145 Conyza_canadensis_scaffold:8 + View
Erigeron canadensis ECA232G1638 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.H04638 Chr08 + View
Eucalyptus grandis Eucgr.B03492 Chr02 - View
Erythranthe guttata Migut.K00733 scaffold_11 - View
Erythranthe guttata Migut.E00017 scaffold_5 + View
Eutrema salsugineum Thhalv10018922m.g PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED scaffold_9 - View
Eutrema salsugineum Thhalv10013738m.g PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED scaffold_2 + View
Fragaria x ananassa FAN17G1837 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Fvb4-2 - View
Fragaria x ananassa FAN22G0872 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Fvb4-1 + View
Fragaria x ananassa FAN07G0970 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Fvb4-4 - View
Fragaria x ananassa FAN04G1262 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Fvb5-4 + View
Fragaria vesca FvH4_4g23760 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Fvb4 + View
Gossypium hirsutum Gohir.A07G051300 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED A07 + View
Gossypium hirsutum Gohir.D01G147600 PF01753//PF08238//PF12937 - MYND finger (zf-MYND) // Sel1 repeat (Sel1) // F-box-like (F-box-like) D01 + View
Gossypium hirsutum Gohir.A12G148700 PF01753//PF12937 - MYND finger (zf-MYND) // F-box-like (F-box-like) A12 - View
Gossypium hirsutum Gohir.D12G152600 PF01753//PF12937 - MYND finger (zf-MYND) // F-box-like (F-box-like) D12 - View
Gossypium hirsutum Gohir.D02G149100 PF01753//PF08238 - MYND finger (zf-MYND) // Sel1 repeat (Sel1) D02 + View
Gossypium hirsutum Gohir.A03G126100 PF01753//PF08238 - MYND finger (zf-MYND) // Sel1 repeat (Sel1) A03 + View
Glycine max Glyma.05G147400 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Gm05 - View
Glycine max Glyma.11G250600 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Gm11 - View
Glycine max Glyma.08G104400 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Gm08 - View
Glycine max Glyma.06G170100 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Gm06 + View
Glycine max Glyma.18G006600 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Gm18 + View
Glycine max Glyma.04G195700 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Gm04 - View
Gossypium raimondii Gorai.005G167000 Chr05 + View
Gossypium raimondii Gorai.002G183600 Chr02 + View
Gossypium raimondii Gorai.008G165100 Chr08 - View
Helianthus annuus HanXRQChr08g0207811 Putative F-box domain; Zinc finger, MYND-type; Tetratricopeptide-like helical domain HanXRQChr08 - View
Helianthus annuus HanXRQChr17g0569031 Putative zinc finger, MYND-type; Tetratricopeptide-like helical domain HanXRQChr17 + View
Hydrangea macrophylla Hma1.2p1_0065F.1_g035490 Hma1.2p1_0065F.1 + View
Hydrangea macrophylla Hma1.2p1_0275F.1_g110760 Hma1.2p1_0275F.1 + View
Lupinus albus Lalb_Chr07g0187131 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Lalb_Chr07 + View
Lupinus albus Lalb_Chr12g0206181 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Lalb_Chr12 + View
Lupinus albus Lalb_Chr23g0278051 PTHR12298//PTHR12298:SF24 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Lalb_Chr23 - View
Lotus japonicus Lj1g0026421 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED chr1 - View
Lotus japonicus Lj4g0018673 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED chr4 + View
Lonicera japonica Lj6A826T55 GWHAAZE00000006 - View
Lonicera japonica Lj3A1068T45 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_4_3441 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Lsat_1_v8_lg_4 + View
Lactuca sativa Lsat_1_v5_gn_3_31140 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Lsat_1_v8_lg_3 - View
Lactuca sativa Lsat_1_v5_gn_1_28940 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Lsat_1_v8_lg_1 - View
Magnolia biondii MBI07_g31019_MAGBIO AED:0.07 Chr07 - View
Malus domestica MD13G1119000 HCP-like superfamily protein with MYND-type zinc finger Chr13 - View
Malus domestica MD16G1119400 HCP-like superfamily protein with MYND-type zinc finger Chr16 - View
Manihot esculenta Manes.12G011300 Chromosome12 + View
Manihot esculenta Manes.06G119500 Chromosome06 - View
Manihot esculenta Manes.14G051300 Chromosome14 + View
Manihot esculenta Manes.13G012200 Chromosome13 + View
Medicago truncatula Medtr3g099300 HCP family protein with MYND-type zinc finger protein chr3 + View
Medicago truncatula Medtr8g080640 HCP family protein with MYND-type zinc finger protein chr8 - View
Medicago truncatula Medtr3g085330 HCP family protein with MYND-type zinc finger protein chr3 + View
Nelumbo nucifera Nn4g22319 chr4 - View
Nelumbo nucifera Nn3g16464 chr3 + View
Olea europaea Oeu006528.1 chr12 + View
Olea europaea Oeu041664.1 chr1 + View
Olea europaea Oeu036870.1 chr1 - View
Petunia axillaris Peaxi162Scf00128g01229 HCP-like superfamily protein with MYND-type zinc finger Peaxi162Scf00128 - View
Punica granatum PGR119G1917 NC_045132.1 - View
Punica granatum PGR102G0821 NC_045129.1 + View
Prunus persica Prupe.1G225800 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Pp01 + View
Prunus persica Prupe.5G151000 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Pp05 - View
Pisum sativum Psat5g095600 MYND finger chr5LG3 - View
Papaver somniferum PSO478G0822 NC_039361.1 - View
Papaver somniferum PSO017G6438 NC_039362.1 - View
Populus trichocarpa Potri.012G097600 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Chr12 - View
Populus trichocarpa Potri.001G056800 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Chr01 + View
Populus trichocarpa Potri.015G096200 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Chr15 - View
Populus trichocarpa Potri.003G171400 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Chr03 - View
Phaseolus vulgaris Phvul.001G261900 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED Chr01 - View
Quercus lobata QL03p052748 3 + View
Rosa chinensis RcHm_v2.0_Chr7g0190191 RcHm_v2.0_Chr7 - View
Rosa chinensis RcHm_v2.0_Chr4g0430251 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim12G0025800 chr12 + View
Rhododendron simsii Rhsim12G0174500 chr12 - View
Rhododendron simsii Rhsim12G0099700 chr12 - View
Striga asiatica SGA_v2.0_scaffold391G50632 scaffold391 + View
Striga asiatica SGA_v2.0_scaffold87G27157 scaffold87 - View
Salvia bowleyana SalBow2G1525 GWHASIU00000007 - View
Salvia bowleyana SalBow8G4764 GWHASIU00000004 + View
Salix brachista Sabra15G0117000 GWHAAZH00000015 - View
Salix brachista Sabra12G0071500 GWHAAZH00000012 - View
Simmondsia chinensis Sc04g0010130 GWHAASQ00000004 - View
Simmondsia chinensis Sc11g0000460 GWHAASQ00000011 + View
Simmondsia chinensis Sc14g0009060 GWHAASQ00000014 - View
Sechium edule Sed0009544 LG04 + View
Sechium edule Sed0009301 LG12 - View
Sechium edule Sed0017688 LG06 - View
Solanum lycopersicum Solyc05g015420.4 F-box protein (AHRD V3.3 *** A0A2G2YF26_CAPAN) SL4.0ch05 - View
Schrenkiella parvula Sp6g12630 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED ch6-6 - View
Schrenkiella parvula Sp5g22290 PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED ch5-6 + View
Solanum pennellii Sopen05g010760 HCP-like superfamily protein with MYND-type zinc finger | FUNCTIONS IN: binding, zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type , Tetratricopeptide-like helical , Sel1-like | BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein with MYND-type zinc finger Spenn-ch05 - View
Solanum tuberosum PGSC0003DMG400029105 Zinc finger family protein ST4.03ch05 - View
Selenicereus undatus Hund06090 Scaffold_19641 - View
Selenicereus undatus Hund25465 Scaffold_3410 - View
Trochodendron aralioides TAR371G0192 group13 + View
Trochodendron aralioides TAR629G3412 group0 - View
Theobroma cacao Thecc.03G129100 HCP-like superfamily protein with MYND-type zinc finger Chromosome_3 - View
Theobroma cacao Thecc.02G208700 HCP-like superfamily protein with MYND-type zinc finger Chromosome_2 + View
Tarenaya hassleriana THA.LOC104825507 F-box protein At1g67340 NW_010967396.1 + View
Trifolium pratense TPR.G17097 Tp57577_TGAC_v2_LG3 + View
Trifolium pratense TPR.G17788 Tp57577_TGAC_v2_LG5 + View
Tripterygium wilfordii TWI18G0288 NC_052241.1 + View
Tripterygium wilfordii TWI14G1359 NC_052249.1 - View
Tripterygium wilfordii TWI75G1443 NC_052253.1 - View
Tripterygium wilfordii TWI23G0191 NC_052239.1 + View
Tripterygium wilfordii TWI36G0603 NC_052237.1 - View
Utricularia gibba unitig_26.g10398 unitig_26 - View
Utricularia gibba unitig_699.g19953 unitig_699 - View
Vaccinium macrocarpon vmacro16106 Similar to At1g67340: F-box protein At1g67340 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro01060 Similar to At1g67340: F-box protein At1g67340 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G2022 CM024069.1 + View
Vigna mungo VMungo1383G1076 CM024070.1 - View
Vitis vinifera GSVIVG01010486001 chr1 + View