Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0009970 PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X2 [Nicotiana tomentosiformis] Chr11 + View
CSS0031674 PREDICTED: putative E3 ubiquitin-protein ligase RF298 [Vitis vinifera] Chr5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr5.1325 chr5 - View
Acer truncatum Atru.chr4.2703 chr4 + View
Actinidia chinensis Actinidia23452 Lachesis_group3 - View
Actinidia chinensis Actinidia00072 Lachesis_group10 - View
Actinidia chinensis Actinidia40210 Lachesis_group22 - View
Arabidopsis lyrata AL1G12890 scaffold_1 + View
Avicennia marina MSTRG.10029 ScioBoG_12795_HRSCAF_12848 + View
Avicennia marina MSTRG.3972 ScioBoG_102837_HRSCAF_103074 - View
Aquilegia oxysepala Aqoxy2G03184 CHR02 - View
Aquilegia oxysepala Aqoxy5G00567 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.099TXP PTHR10044:SF98 - DETERIN arahy.Tifrunner.gnm1.Arahy.14 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SWT1V1 PTHR10044:SF98 - DETERIN arahy.Tifrunner.gnm1.Arahy.04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.D4XMTJ KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.R5XDVK KOG1853//KOG4172 - LIS1-interacting protein NUDE // Predicted E3 ubiquitin ligase arahy.Tifrunner.gnm1.Arahy.11 + View
Arabidopsis thaliana AT1G03365 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G03000.2). Chr1 + View
Amborella trichopoda ATR0626G193 AmTr_v1.0_scaffold00025 + View
Brassica napus A10p01920 A10 + View
Brassica oleracea BolC5t28967H C5 + View
Cicer arietinum L. Ca_10393_v3 Ca_LG4_v3 - View
Cicer arietinum L. Ca_00588_v3 Ca_LG1_v3 - View
Corylus avellana Haze_01010 Similar to RF298: Putative E3 ubiquitin-protein ligase RF298 (Arabidopsis thaliana OX%3D3702) 1 + View
Corylus avellana Haze_04774 Similar to RF298: Putative E3 ubiquitin-protein ligase RF298 (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc03_g02740 Putative E3 ubiquitin-protein ligase RF298 chr3 - View
Citrus clementina Ciclev10004269m.g scaffold_9 - View
Citrus clementina Ciclev10018843m.g scaffold_3 + View
Cardamine hirsuta CARHR002740 Baculoviral IAP repeat-containing protein Chr1 + View
Carya illinoinensis CiPaw.01G156700 KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase Chr01 - View
Carya illinoinensis CiPaw.07G096400 PTHR10044//PTHR10044:SF98 - INHIBITOR OF APOPTOSIS // DETERIN Chr07 + View
Carya illinoinensis CiPaw.02G089400 PTHR10044:SF98 - DETERIN Chr02 - View
Citrullus lanatus ClCG05G005580 Baculoviral IAP repeat-containing protein CG_Chr05 + View
Cucumis melo MELO3C006584.2 RING/U-box superfamily protein, putative isoform 1 chr06 + View
Carica papaya Cpa.g.sc16.73 supercontig_16 + View
Capsella rubella Carub.0001s0249 PTHR10044:SF98 - DETERIN scaffold_1 + View
Cucumis sativus L. CsaV3_3G013920 E3 ubiquitin-protein like chr3 + View
Daucus carota DCAR_027130 hypothetical protein DCARv2_Chr8 + View
Daucus carota DCAR_002763 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv38350 GWHABJS00000016 + View
Davidia involucrata Dinv32972 GWHABJS00000010 + View
Durio zibethinus Duzib052G1169 NW_019167849.1 + View
Durio zibethinus Duzib151G0634 NW_019167904.1 + View
Eucalyptus grandis Eucgr.H03641 Chr08 + View
Erythranthe guttata Migut.G00238 scaffold_7 - View
Eutrema salsugineum Thhalv10006805m.g PTHR10044:SF98 - DETERIN scaffold_5 - View
Fragaria x ananassa FAN12G1926 PTHR10044:SF98 - DETERIN Fvb4-3 + View
Fragaria x ananassa FAN20G0897 KOG1100//KOG4172 - Predicted E3 ubiquitin ligase // Predicted E3 ubiquitin ligase Fvb2-3 - View
Fragaria x ananassa FAN07G0666 PTHR10044//PTHR10044:SF98 - INHIBITOR OF APOPTOSIS // DETERIN Fvb4-4 - View
Fragaria x ananassa FAN17G2250 PTHR10044//PTHR10044:SF98 - INHIBITOR OF APOPTOSIS // DETERIN Fvb4-2 - View
Fragaria x ananassa FAN15G1197 KOG4172//KOG4687 - Predicted E3 ubiquitin ligase // Uncharacterized coiled-coil protein Fvb2-4 + View
Fragaria x ananassa FAN22G0914 PTHR10044//PTHR10044:SF98 - INHIBITOR OF APOPTOSIS // DETERIN Fvb4-1 + View
Fragaria x ananassa FAN27G1621 KOG1100//KOG4172 - Predicted E3 ubiquitin ligase // Predicted E3 ubiquitin ligase Fvb2-1 + View
Fragaria x ananassa FAN24G2124 KOG1100//KOG4172 - Predicted E3 ubiquitin ligase // Predicted E3 ubiquitin ligase Fvb2-2 - View
Fragaria vesca FvH4_2g24221 KOG1100//KOG4172 - Predicted E3 ubiquitin ligase // Predicted E3 ubiquitin ligase Fvb2 + View
Fragaria vesca FvH4_4g16660 KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase Fvb4 + View
Gossypium hirsutum Gohir.A09G232200 KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase A09 + View
Gossypium hirsutum Gohir.A02G044704 PTHR10044:SF98 - DETERIN A02 + View
Gossypium hirsutum Gohir.D09G233300 KOG1003//KOG1100//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase // Predicted E3 ubiquitin ligase D09 + View
Gossypium hirsutum Gohir.D02G050800 PTHR10044:SF98 - DETERIN D02 + View
Gossypium hirsutum Gohir.D12G006200 PTHR10044:SF98 - DETERIN D12 + View
Gossypium hirsutum Gohir.A12G006800 PTHR10044:SF98 - DETERIN A12 + View
Glycine max Glyma.07G253800 KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase Gm07 - View
Glycine max Glyma.17G020500 KOG2991//KOG4172 - Splicing regulator // Predicted E3 ubiquitin ligase Gm17 + View
Glycine max Glyma.15G100500 KOG1003//KOG2991//KOG4172 - Actin filament-coating protein tropomyosin // Splicing regulator // Predicted E3 ubiquitin ligase Gm15 - View
Glycine max Glyma.02G150400 PTHR10044:SF98 - DETERIN Gm02 + View
Glycine max Glyma.13G212200 KOG1003//KOG2991//KOG4172 - Actin filament-coating protein tropomyosin // Splicing regulator // Predicted E3 ubiquitin ligase Gm13 + View
Gossypium raimondii Gorai.006G256200 Chr06 + View
Gossypium raimondii Gorai.005G056100 Chr05 + View
Gossypium raimondii Gorai.008G006200 Chr08 + View
Hydrangea macrophylla Hma1.2p1_0643F.1_g194490 Hma1.2p1_0643F.1 + View
Lupinus albus Lalb_Chr15g0087171 PTHR10044:SF98 - DETERIN Lalb_Chr15 - View
Lupinus albus Lalb_Chr12g0196361 PTHR10044:SF98 - DETERIN Lalb_Chr12 + View
Lupinus albus Lalb_Chr07g0177491 PTHR10044:SF98 - DETERIN Lalb_Chr07 + View
Lotus japonicus Lj6g0024018 KOG1003//KOG3032//KOG4172 - Actin filament-coating protein tropomyosin // Uncharacterized conserved protein // Predicted E3 ubiquitin ligase chr6 - View
Lotus japonicus Lj5g0028215 KOG1100//KOG4172 - Predicted E3 ubiquitin ligase // Predicted E3 ubiquitin ligase chr5 + View
Lotus japonicus Lj4g0005654 KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase chr4 + View
Lonicera japonica Lj1A42T61 GWHAAZE00000001 - View
Lonicera japonica Lj3A806T49 GWHAAZE00000003 + View
Magnolia biondii MBI17_g12080_MAGBIO AED:0.00 Chr17 + View
Magnolia biondii MBI19_g34709_MAGBIO AED:0.04 Chr19 + View
Malus domestica MD03G1272000 RING/U-box superfamily protein Chr03 + View
Malus domestica MD16G1179600 RING/U-box superfamily protein Chr16 - View
Malus domestica MD13G1177600 RING/U-box superfamily protein Chr13 - View
Malus domestica MD11G1292600 RING/U-box superfamily protein Chr11 + View
Manihot esculenta Manes.03G188200 Chromosome03 + View
Manihot esculenta Manes.15G020100 Chromosome15 - View
Medicago truncatula Medtr2g020870 E3 ubiquitin-protein ligase RF298-like protein, putative chr2 - View
Nelumbo nucifera Nn3g21182 chr3 + View
Nicotiana tabacum Nitab4.5_0000059g0170 Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0000059 + View
Olea europaea Oeu029293.3 scaffold244 - View
Olea europaea Oeu044812.1 chr22 - View
Petunia axillaris Peaxi162Scf00095g00415 RING/U-box superfamily protein Peaxi162Scf00095 - View
Punica granatum PGR031G0600 NC_045127.1 - View
Prunus persica Prupe.8G248200 Pp08 + View
Pisum sativum Psat1g185680 Zinc finger + C3HC4 type (RING finger) chr1LG6 + View
Populus trichocarpa Potri.010G027900 PTHR10044:SF98 - DETERIN Chr10 - View
Populus trichocarpa Potri.008G198300 PTHR10044:SF98 - DETERIN Chr08 - View
Phaseolus vulgaris Phvul.003G098100 KOG1003//KOG1853//KOG4172 - Actin filament-coating protein tropomyosin // LIS1-interacting protein NUDE // Predicted E3 ubiquitin ligase Chr03 + View
Phaseolus vulgaris Phvul.007G168300 Chr07 - View
Phaseolus vulgaris Phvul.006G158500 Chr06 + View
Quercus lobata QL06p006206 6 + View
Quercus lobata QL12p023040 12 + View
Rosa chinensis RcHm_v2.0_Chr4g0420121 RcHm_v2.0_Chr4 + View
Rosa chinensis RcHm_v2.0_Chr6g0292011 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim13G0020900 chr13 - View
Rhododendron simsii Rhsim02G0016800 chr02 - View
Striga asiatica SGA_v2.0_scaffold57G20297 scaffold57 - View
Striga asiatica SGA_v2.0_scaffold142G35642 scaffold142 + View
Salvia bowleyana SalBow6G0084 GWHASIU00000002 - View
Salix brachista Sabra08G0162100 GWHAAZH00000008 + View
Salix brachista Sabra10G0012800 GWHAAZH00000010 + View
Simmondsia chinensis Sc25g0004540 GWHAASQ00000025 + View
Simmondsia chinensis Sc19g0004750 GWHAASQ00000019 - View
Sechium edule Sed0008192 LG02 + View
Solanum lycopersicum Solyc01g080430.4 RING/U-box superfamily protein (AHRD V3.3 *** A0A1P8B7R8_ARATH) SL4.0ch01 + View
Schrenkiella parvula Sp1g02370 PTHR10044:SF98 - DETERIN ch1-1 + View
Solanum pennellii Sopen01g032240 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch01 + View
Solanum pennellii Sopen09g028940 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein . Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400032108 Conserved gene of unknown function ST4.03ch01 - View
Solanum tuberosum PGSC0003DMG400003810 Nutrient reservoir ST4.03ch09 + View
Trochodendron aralioides TAR362G1042 group17 - View
Trochodendron aralioides TAR636G2290 group1 + View
Theobroma cacao Thecc.04G272500 RING/U-box superfamily protein Chromosome_4 + View
Theobroma cacao Thecc.01G286200 Chromosome_1 + View
Tarenaya hassleriana THA.LOC104801211 putative E3 ubiquitin-protein ligase RF298 NW_010969548.1 - View
Trifolium pratense TPR.G18019 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI73G0410 NC_052232.1 - View
Tripterygium wilfordii TWI09G1350 NC_052245.1 + View
Utricularia gibba unitig_748.g8359 unitig_748 + View
Vaccinium macrocarpon vmacro02535 Similar to RF298: Putative E3 ubiquitin-protein ligase RF298 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro08240 Similar to RF298: Putative E3 ubiquitin-protein ligase RF298 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro15288 Similar to RF298: Putative E3 ubiquitin-protein ligase RF298 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G1600 CM024074.1 - View
Vigna mungo VMungo0540G1937 CM024075.1 + View
Vigna mungo VMungo0720G1788 CM024071.1 + View