Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0038711 PREDICTED: COP9 signalosome complex subunit 1 [Vitis vinifera] Chr3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G15210 LG-10 + View
Acer truncatum Atru.chr5.417 chr5 + View
Actinidia chinensis Actinidia38296 Lachesis_group15 - View
Actinidia chinensis Actinidia32928 Lachesis_group0 - View
Arabidopsis lyrata AL5G43380 scaffold_5 + View
Avicennia marina MSTRG.20801 ScioBoG_26180_HRSCAF_26306 + View
Avicennia marina MSTRG.4874 ScioBoG_102838_HRSCAF_103081 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.I68A9W KOG0686 - COP9 signalosome, subunit CSN1 arahy.Tifrunner.gnm1.Arahy.14 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AB99XC K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) arahy.Tifrunner.gnm1.Arahy.12 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WVA4TF KOG0686 - COP9 signalosome, subunit CSN1 arahy.Tifrunner.gnm1.Arahy.04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6U8ZH2 K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) arahy.Tifrunner.gnm1.Arahy.02 + View
Arabidopsis thaliana AT3G61140 COP9 signalosome complex subunit 1 Represses photomorphogenesis and induces skotomorphogenesis in the dark. Component of the nuclear-localized COP9 complex. Mutants display striking purple coloration due to anthocyanin accumulation in their cotyledons%2C first become defective during embryogenesis and exhibit limited seedling development. FUSCA 6 (FUS6)%3B CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717)%2C 26S proteasome%2C regulatory subunit Rpn7 (InterPro:IPR019585)%3B BEST Arabidopsis thaliana protein match is: COP9 signalosome complex-related / CSN complex-related (TAIR:AT3G12850.1)%3B Has 1199 Blast hits to 1198 proteins in 240 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 515%3B Fungi - 231%3B Plants - 316%3B Viruses - 0%3B Other Eukaryotes - 137 (source: NCBI BLink). Chr3 + View
Amborella trichopoda ATR0757G035 AmTr_v1.0_scaffold00069 - View
Brassica carinata BcaC07g40617 ChrC07 + View
Brassica carinata BcaB02g07388 ChrB02 - View
Brassica napus A09p53200 A09 + View
Brassica napus C06p27130 C06 + View
Brassica napus C08p35990 C08 + View
Brassica oleracea BolC6t37886H C6 + View
Brassica oleracea BolC8t51181H C8 + View
Brassica rapa BraA09t40745Z A09 + View
Beta vulgaris EL10Ac1g00989 K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Chr1_EL10_PGA_scaffold3 + View
Capsicum annuum CAN.G170.26 PGAv.1.6.scaffold170 - View
Cannabis sativa CANSAT56G3752 NC_044371.1 - View
Cicer arietinum L. Ca_07858_v3 Ca_LG3_v3 - View
Corylus avellana Haze_15212 Similar to CSN1: COP9 signalosome complex subunit 1 (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc02_g37360 COP9 signalosome complex subunit 1 chr2 + View
Citrus clementina Ciclev10020177m.g scaffold_3 - View
Cardamine hirsuta CARHR171420 Cop9 signalosome complex subunit, putative Chr5 + View
Carya illinoinensis CiPaw.02G026000 K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Chr02 + View
Citrullus lanatus ClCG05G001830 Cop9 signalosome complex subunit, putative CG_Chr05 - View
Cucumis melo MELO3C006142.2 COP9 signalosome complex subunit 1 chr06 - View
Corchorus olitorius COL.COLO4_12614 hypothetical protein AWUE01014934.1 - View
Carica papaya Cpa.g.sc18.218 supercontig_18 - View
Chenopodium quinoa AUR62004300 CSN1: COP9 signalosome complex subunit 1 C_Quinoa_Scaffold_4250 + View
Capsella rubella Carub.0005s2779 scaffold_5 + View
Cucumis sativus L. CsaV3_3G009220 COP9 signalosome complex subunit 1 chr3 - View
Davidia involucrata Dinv43765 GWHABJS00000016 + View
Durio zibethinus Duzib138G1891 NW_019167893.1 + View
Durio zibethinus Duzib133G0086 NW_019167938.1 + View
Eucalyptus grandis Eucgr.E00211 Chr05 - View
Erythranthe guttata Migut.B01700 scaffold_2 + View
Eutrema salsugineum Thhalv10005978m.g K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) scaffold_19 - View
Fragaria x ananassa FAN06G3893 K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Fvb7-2 + View
Fragaria x ananassa FAN06G4052 K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Fvb7-2 + View
Fragaria x ananassa FAN03G3137 K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Fvb7-3 - View
Fragaria x ananassa FAN10G4186 K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Fvb7-1 + View
Fragaria x ananassa FAN10G0206 K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Fvb7-1 + View
Fragaria x ananassa FAN01G1876 K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Fvb7-4 - View
Fragaria vesca FvH4_7g13330 K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Fvb7 + View
Gossypium hirsutum Gohir.A11G085600 K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) A11 + View
Gossypium hirsutum Gohir.D11G089800 K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) D11 + View
Gossypium hirsutum Gohir.A12G104100 K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) A12 + View
Glycine max Glyma.03G016800 K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Gm03 - View
Glycine max Glyma.07G077100 K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Gm07 - View
Gossypium raimondii Gorai.008G117100 Chr08 + View
Gossypium raimondii Gorai.007G095800 Chr07 + View
Hydrangea macrophylla Hma1.2p1_0033F.1_g020520 Hma1.2p1_0033F.1 - View
Lupinus albus Lalb_Chr17g0339991 PTHR14145//PTHR14145:SF2 - 26S PROTESOME SUBUNIT 6 // COP9 SIGNALOSOME COMPLEX SUBUNIT 1 Lalb_Chr17 - View
Lupinus albus Lalb_Chr10g0097451 PTHR14145//PTHR14145:SF2 - 26S PROTESOME SUBUNIT 6 // COP9 SIGNALOSOME COMPLEX SUBUNIT 1 Lalb_Chr10 - View
Lotus japonicus Lj3g0009639 PTHR14145:SF2 - COP9 SIGNALOSOME COMPLEX SUBUNIT 1 chr3 - View
Lonicera japonica Lj7C518G12 GWHAAZE00000007 - View
Magnolia biondii MBI12_g36508_MAGBIO AED:0.40 Chr12 + View
Malus domestica MD01G1050400 26S proteasome Chr01 - View
Manihot esculenta Manes.05G039500 Chromosome05 - View
Medicago truncatula Medtr7g076160 COP9 signalosome complex subunit 1 chr7 - View
Medicago truncatula Medtr8g432630 COP9 signalosome complex subunit 1 chr8 - View
Petunia axillaris Peaxi162Scf00021g00920 COP9 signalosome complex subunit 1 Peaxi162Scf00021 + View
Punica granatum PGR042G2189 NC_045130.1 - View
Prunus persica Prupe.2G156700 K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Pp02 + View
Populus trichocarpa Potri.002G154500 K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Chr02 + View
Populus trichocarpa Potri.014G075500 K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Chr14 - View
Phaseolus vulgaris Phvul.010G090500 K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) Chr10 - View
Quercus lobata QL08p050260 8 - View
Rosa chinensis RcHm_v2.0_Chr1g0352641 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim01G0153400 chr01 - View
Rhododendron simsii Rhsim07G0020500 chr07 - View
Striga asiatica SGA_v2.0_scaffold153G37076 scaffold153 + View
Striga asiatica SGA_v2.0_scaffold95G28865 scaffold95 - View
Salvia bowleyana SalBow3G3192 GWHASIU00000006 + View
Salix brachista Sabra14G0056300 GWHAAZH00000014 + View
Salix brachista Sabra02G0122500 GWHAAZH00000002 + View
Simmondsia chinensis Sc23g0003210 GWHAASQ00000023 - View
Sechium edule Sed0001471 LG02 - View
Sechium edule Sed0018711 LG12 - View
Solanum lycopersicum Solyc01g091650.3 COP9 signalosome complex subunit 1 (AHRD V3.3 *** A0A2G3AGT2_CAPAN) SL4.0ch01 - View
Schrenkiella parvula Sp5g02240 K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) ch5-1 - View
Solanum pennellii Sopen01g037420 Represses photomorphogenesis and induces skotomorphogenesis in the dark. Component of the nuclear-localized COP9 complex. Mutants display striking purple coloration due to anthocyanin accumulation in their cotyledons, first become defective during embryogenesis and exhibit limited seedling development. | FUSCA 6 (FUS6) | CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain , 26S proteasome, regulatory subunit Rpn7 | BEST Arabidopsis thaliana protein match is: COP9 signalosome complex-related / CSN complex-related Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400027768 Cop11 protein ST4.03ch01 - View
Selenicereus undatus Hund27317 Scaffold_2055 - View
Selenicereus undatus Hund16957 Scaffold_33675 - View
Trochodendron aralioides TAR374G1595 group12 + View
Trochodendron aralioides TAR375G0585 group15 + View
Theobroma cacao Thecc.01G366900 Chromosome_1 - View
Trifolium pratense TPR.G37846 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI23G1177 NC_052239.1 + View
Tripterygium wilfordii TWI14G1012 NC_052249.1 + View
Vaccinium macrocarpon vmacro13332 Similar to CSN1: COP9 signalosome complex subunit 1 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro20965 Similar to CSN1: COP9 signalosome complex subunit 1 (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0331G1218 CM024078.1 - View
Vitis vinifera GSVIVG01027510001 chr15 + View