Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG6G13180 | LG-6 | - | View | |
Arabidopsis lyrata | AL7G14710 | scaffold_7 | + | View | |
Avicennia marina | MSTRG.23265 | ScioBoG_3895_HRSCAF_3912 | + | View | |
Aquilegia oxysepala | Aqoxy6G01209 | CHR06 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.7AH9CA | K12637 - 3-epi-6-deoxocathasterone 23-monooxygenase (CYP90C1, ROT3) | arahy.Tifrunner.gnm1.Arahy.15 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.B5QQYI | PTHR24286//PTHR24286:SF79 - FAMILY NOT NAMED // 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE | arahy.Tifrunner.gnm1.Arahy.05 | - | View |
Arabidopsis thaliana | AT4G36380 | Cytochrome P450 superfamily protein Encodes a cytochrome P-450 gene that is involved in leaf blade expansion by controlling polar cell expansion in the leaf length direction. Member of the CYP90C CYP450 family. ROT3 was shown to be involved in brassinosteroid biosynthesis%2C most likely in the conversion step of typhasterol (TY) to castasterone (CS). As 6-deoxo-CS was unable to restore the phenotype of rot3-1%2C it has been postulated that ROT3 might be specifically involved in the conversion of TY to CS in the C6-oxidation pathway of brassinolide. Recently%2C CYP90C1 was shown to catalyse the C-23 hydroxylation of several brassinosteroids (the enzyme has a broad specificity for 22-hydroxylated substrates). ROTUNDIFOLIA 3 (ROT3)%3B CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128)%2C Cytochrome P450%2C E-class%2C group IV (InterPro:IPR002403)%2C Cytochrome P450%2C conserved site (InterPro:IPR017972)%3B BEST Arabidopsis thaliana protein match is: cytochrome P450%2C family 90%2C subfamily D%2C polypeptide 1 (TAIR:AT3G13730.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). | Chr4 | - | View |
Brassica carinata | BcaNung00736 | Contig350 | + | View | |
Brassica napus | C01p02650 | C01 | + | View | |
Brassica napus | A01p02450 | A01 | + | View | |
Brassica napus | A03p64210 | A03 | - | View | |
Brassica rapa | BraA03t15491Z | A03 | - | View | |
Beta vulgaris | EL10As8g23877 | K12637 - 3-epi-6-deoxocathasterone 23-monooxygenase (CYP90C1, ROT3) | Scaffold_0008 | - | View |
Capsicum annuum | CAN.G358.23 | PGAv.1.6.scaffold358 | - | View | |
Cannabis sativa | CANSAT01G0247 | NC_044373.1 | + | View | |
Cicer arietinum L. | Ca_24887_v3 | Ca_LG8_v3 | - | View | |
Corylus avellana | Haze_03833 | Similar to CYP90C1: 3-epi-6-deoxocathasterone 23-monooxygenase CYP90C1 (Arabidopsis thaliana OX%3D3702) | 2 | - | View |
Citrus clementina | Ciclev10025479m.g | scaffold_7 | - | View | |
Cardamine hirsuta | CARHR244710 | Cytochrome P450 | Chr7 | - | View |
Carya illinoinensis | CiPaw.07G053600 | K12637 - 3-epi-6-deoxocathasterone 23-monooxygenase (CYP90C1, ROT3) | Chr07 | + | View |
Corchorus olitorius | COL.COLO4_21993 | Cytochrome P450 | AWUE01017842.1 | - | View |
Chenopodium quinoa | AUR62004115 | ROT3: 3-epi-6-deoxocathasterone 23-monooxygenase | C_Quinoa_Scaffold_2370 | + | View |
Chenopodium quinoa | AUR62007630 | ROT3: 3-epi-6-deoxocathasterone 23-monooxygenase | C_Quinoa_Scaffold_2646 | + | View |
Capsella rubella | Carub.0007s0393 | K12637 - 3-epi-6-deoxocathasterone 23-monooxygenase (CYP90C1, ROT3) | scaffold_7 | + | View |
Davidia involucrata | Dinv40036 | GWHABJS00000014 | - | View | |
Durio zibethinus | Duzib187G0291 | NW_019167860.1 | + | View | |
Erythranthe guttata | Migut.H02504 | scaffold_8 | - | View | |
Eutrema salsugineum | Thhalv10024901m.g | K12637 - 3-epi-6-deoxocathasterone 23-monooxygenase (CYP90C1, ROT3) | scaffold_1 | + | View |
Fragaria x ananassa | FAN19G3019 | K12637 - 3-epi-6-deoxocathasterone 23-monooxygenase (CYP90C1, ROT3) | Fvb1-4 | + | View |
Fragaria x ananassa | FAN23G2431 | PTHR24286:SF79 - 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE | Fvb1-3 | + | View |
Fragaria x ananassa | FAN26G3469 | PTHR24286//PTHR24286:SF79 - FAMILY NOT NAMED // 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE | Fvb1-2 | + | View |
Fragaria vesca | FvH4_1g12330 | K12637 - 3-epi-6-deoxocathasterone 23-monooxygenase (CYP90C1, ROT3) | Fvb1 | + | View |
Gossypium hirsutum | Gohir.A02G168200 | K12637 - 3-epi-6-deoxocathasterone 23-monooxygenase (CYP90C1, ROT3) | A02 | + | View |
Gossypium hirsutum | Gohir.D11G187200 | K12637 - 3-epi-6-deoxocathasterone 23-monooxygenase (CYP90C1, ROT3) | D11 | - | View |
Gossypium hirsutum | Gohir.D03G011800 | 1.14.13.112 - 3-epi-6-deoxocathasterone 23-monooxygenase / CYP90D1 | D03 | - | View |
Gossypium hirsutum | Gohir.A11G179500 | K12637 - 3-epi-6-deoxocathasterone 23-monooxygenase (CYP90C1, ROT3) | A11 | - | View |
Glycine max | Glyma.11G073300 | K12637 - 3-epi-6-deoxocathasterone 23-monooxygenase (CYP90C1, ROT3) | Gm11 | - | View |
Glycine max | Glyma.01G170000 | 1.14.13.112 - 3-epi-6-deoxocathasterone 23-monooxygenase / CYP90D1 | Gm01 | + | View |
Gossypium raimondii | Gorai.007G199100 | Chr07 | - | View | |
Lotus japonicus | Lj2g0001294 | K12637 - 3-epi-6-deoxocathasterone 23-monooxygenase (CYP90C1, ROT3) | chr2 | - | View |
Lotus japonicus | Lj4g0020011 | 1.14.13.112 - 3-epi-6-deoxocathasterone 23-monooxygenase / CYP90D1 | chr4 | + | View |
Lactuca sativa | Lsat_1_v5_gn_3_75140 | K12637 - 3-epi-6-deoxocathasterone 23-monooxygenase (CYP90C1, ROT3) | Lsat_1_v8_lg_3 | - | View |
Malus domestica | MD15G1251500 | Cytochrome P450 superfamily protein | Chr15 | - | View |
Malus domestica | MD02G1137700 | Cytochrome P450 superfamily protein | Chr02 | - | View |
Manihot esculenta | Manes.02G099000 | Chromosome02 | + | View | |
Medicago truncatula | Medtr5g021220 | cytochrome P450 family brassinosteroid oxidase | chr5 | - | View |
Nelumbo nucifera | Nn1g05785 | chr1 | - | View | |
Nelumbo nucifera | Nn5g29727 | chr5 | + | View | |
Nicotiana tabacum | Nitab4.5_0003460g0020 | Cytochrome P450, conserved site, Cytochrome P450, E-class, group I, Cytochrome P450 | Nitab4.5_0003460 | + | View |
Nicotiana tabacum | Nitab4.5_0000723g0080 | Cytochrome P450, Cytochrome P450, conserved site, Cytochrome P450, E-class, group I | Nitab4.5_0000723 | - | View |
Petunia axillaris | Peaxi162Scf00084g01113 | Cytochrome P450 superfamily protein | Peaxi162Scf00084 | + | View |
Prunus persica | Prupe.7G162900 | K12637 - 3-epi-6-deoxocathasterone 23-monooxygenase (CYP90C1, ROT3) | Pp07 | + | View |
Pisum sativum | Psat2g156640 | Cytochrome P450 | chr2LG1 | + | View |
Papaver somniferum | PSO675G6410 | NC_039358.1 | + | View | |
Papaver somniferum | PSO541G0909 | NC_039363.1 | + | View | |
Populus trichocarpa | Potri.007G018400 | K12637 - 3-epi-6-deoxocathasterone 23-monooxygenase (CYP90C1, ROT3) | Chr07 | - | View |
Phaseolus vulgaris | Phvul.002G167400 | K12637 - 3-epi-6-deoxocathasterone 23-monooxygenase (CYP90C1, ROT3) | Chr02 | - | View |
Quercus lobata | QL10p007397 | 10 | - | View | |
Quercus lobata | QL06p034805 | 6 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr2g0100151 | RcHm_v2.0_Chr2 | + | View | |
Striga asiatica | SGA_v2.0_scaffold280G46860 | scaffold280 | - | View | |
Salvia bowleyana | SalBow8G5461 | GWHASIU00000004 | + | View | |
Salix brachista | Sabra07G0015500 | GWHAAZH00000007 | - | View | |
Solanum lycopersicum | Solyc02g084740.4 | Cytochrome P450 (AHRD V3.3 *** A0A200QE89_9MAGN) | SL4.0ch02 | - | View |
Schrenkiella parvula | Sp7g34040 | K12637 - 3-epi-6-deoxocathasterone 23-monooxygenase (CYP90C1, ROT3) | ch7-6 | - | View |
Solanum pennellii | Sopen02g029410 | Encodes a cytochrome P-450 gene that is involved in leaf blade expansion by controlling polar cell expansion in the leaf length direction. Member of the CYP90C CYP450 family. ROT3 was shown to be involved in brassinosteroid biosynthesis, most likely in the conversion step of typhasterol (TY) to castasterone (CS). As 6-deoxo-CS was unable to restore the phenotype of rot3-1, it has been postulated that ROT3 might be specifically involved in the conversion of TY to CS in the C6-oxidation pathway of brassinolide. Recently, CYP90C1 was shown to catalyse the C-23 hydroxylation of several brassinosteroids (the enzyme has a broad specificity for 22-hydroxylated substrates). | ROTUNDIFOLIA 3 (ROT3) | CONTAINS InterPro DOMAIN/s: Cytochrome P450 , Cytochrome P450, E-class, group IV , Cytochrome P450, conserved site | BEST Arabidopsis thaliana protein match is: cytochrome P450, family 90, subfamily D, polypeptide 1 | Spenn-ch02 | - | View |
Solanum tuberosum | PGSC0003DMG400003536 | 3-epi-6-deoxocathasterone 23-monooxygenase | ST4.03ch02 | - | View |
Selenicereus undatus | Hund14014 | Scaffold_33679 | + | View | |
Trochodendron aralioides | TAR381G1300 | group11 | - | View | |
Theobroma cacao | Thecc.01G026400 | Cytochrome P450 superfamily protein | Chromosome_1 | - | View |
Tarenaya hassleriana | THA.LOC104807476 | 3-epi-6-deoxocathasterone 23-monooxygenase | NW_010963495.1 | + | View |
Trifolium pratense | TPR.G2364 | Tp57577_TGAC_v2_LG2 | + | View | |
Vigna mungo | VMungo1215G0275 | CM024074.1 | - | View |