Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0043113 PREDICTED: pentatricopeptide repeat-containing protein At1g18485 [Vitis vinifera] Contig855 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.BG.291.p chr11 + View
Acer truncatum Atru.chr9.642 chr9 - View
Actinidia chinensis Actinidia35058 Lachesis_group2 - View
Arabidopsis lyrata AL3G11620 scaffold_3 - View
Arabidopsis lyrata AL2G27960 scaffold_2 + View
Arabidopsis lyrata AL5G13690 scaffold_5 + View
Arabidopsis lyrata AL1G25170 scaffold_1 + View
Arabidopsis lyrata AL1G30920 scaffold_1 + View
Avicennia marina MSTRG.2963 ScioBoG_102835_HRSCAF_103059 + View
Avicennia marina MSTRG.7720 ScioBoG_102841_HRSCAF_103114 + View
Aquilegia oxysepala Aqoxy3G00580 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0J1699 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) arahy.Tifrunner.gnm1.Arahy.14 + View
Arabidopsis thaliana AT2G03880 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G24000.1)%3B Has 41924 Blast hits to 14587 proteins in 276 species: Archae - 3%3B Bacteria - 26%3B Metazoa - 84%3B Fungi - 128%3B Plants - 40967%3B Viruses - 0%3B Other Eukaryotes - 716 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT1G68930 pentatricopeptide (PPR) repeat-containing protein pentatricopeptide (PPR) repeat-containing protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1)%3B Has 47331 Blast hits to 14466 proteins in 272 species: Archae - 2%3B Bacteria - 18%3B Metazoa - 110%3B Fungi - 135%3B Plants - 46381%3B Viruses - 0%3B Other Eukaryotes - 685 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT3G02330 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B FUNCTIONS IN: binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G39530.1)%3B Has 56701 Blast hits to 14050 proteins in 283 species: Archae - 2%3B Bacteria - 22%3B Metazoa - 148%3B Fungi - 141%3B Plants - 55528%3B Viruses - 0%3B Other Eukaryotes - 860 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC05g25742 ChrC05 + View
Brassica carinata BcaC06g31140 ChrC06 - View
Brassica carinata BcaB07g31857 ChrB07 + View
Brassica carinata BcaB03g15865 ChrB03 + View
Brassica napus C07p34260 C07 + View
Brassica napus A07p35360 A07 + View
Brassica napus A06p14520 A06 + View
Brassica napus A06p42820 A06 - View
Brassica oleracea BolC7t43955H C7 + View
Brassica rapa BraA06t24578Z A06 + View
Beta vulgaris EL10Ac5g11202 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr5_EL10_PGA_scaffold2 - View
Cannabis sativa CANSAT64G2859 NC_044379.1 - View
Cicer arietinum L. Ca_11579_v3 Ca_LG4_v3 - View
Corylus avellana Haze_14355 Similar to PCMP-E90: Pentatricopeptide repeat-containing protein At3g02330, mitochondrial (Arabidopsis thaliana OX%3D3702) 5 + View
Coffea canephora Cc11_g11370 Putative pentatricopeptide repeat-containing protein At1g68930 chr11 + View
Coffea canephora Cc04_g08000 Pentatricopeptide repeat-containing protein At1g18485 chr4 + View
Coffea canephora Cc07_g04680 Pentatricopeptide repeat-containing protein At3g02330 chr7 - View
Citrus clementina Ciclev10018700m.g scaffold_3 - View
Citrus clementina Ciclev10033304m.g scaffold_4 + View
Ceratophyllum demersum CDE10G0072 8 + View
Carpinus fangiana Cfa019402 Cfa08 - View
Carpinus fangiana Cfa007719 Cfa03 - View
Cardamine hirsuta CARHR146270 Pentatricopeptide repeat-containing protein Chr5 + View
Cardamine hirsuta CARHR019090 Pentatricopeptide repeat-containing protein Chr1 + View
Cardamine hirsuta CARHR061800 Pentatricopeptide repeat-containing protein Chr2 + View
Carya illinoinensis CiPaw.03G080800 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr03 + View
Citrullus lanatus ClCG06G015350 Pentatricopeptide repeat protein CG_Chr06 + View
Cucumis melo MELO3C017260.2 pentatricopeptide repeat-containing protein At1g18485 chr02 + View
Cucumis melo MELO3C012176.2 Pentatricopeptide repeat-containing protein chr10 + View
Corchorus olitorius COL.COLO4_27773 hypothetical protein AWUE01019685.1 + View
Carica papaya Cpa.g.sc1.174 supercontig_1 - View
Chenopodium quinoa AUR62039688 PCMP-H8: Pentatricopeptide repeat-containing protein At1g18485 C_Quinoa_Scaffold_1452 - View
Chenopodium quinoa AUR62032154 PCMP-H41: Pentatricopeptide repeat-containing protein At2g22070 C_Quinoa_Scaffold_1177 - View
Chenopodium quinoa AUR62007847 PCMP-H22: Putative pentatricopeptide repeat-containing protein At1g68930 C_Quinoa_Scaffold_2646 + View
Capsella rubella Carub.0002s1557 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_2 + View
Capsella rubella Carub.0003s0144 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_3 - View
Capsella rubella Carub.0005s0303 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_5 + View
Cucumis sativus L. CsaV3_1G003230 pentatricopeptide repeat-containing protein At1g18485 chr1 + View
Daucus carota DCAR_014012 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_025464 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv33883 GWHABJS00000014 - View
Davidia involucrata Dinv36825 GWHABJS00000006 + View
Durio zibethinus Duzib251G0862 NW_019167971.1 + View
Erigeron canadensis ECA246G2963 Conyza_canadensis_scaffold:8 + View
Erigeron canadensis ECA246G2547 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.I02086 Chr09 - View
Eucalyptus grandis Eucgr.B00648 Chr02 - View
Eucalyptus grandis Eucgr.K02191 Chr11 - View
Erythranthe guttata Migut.H00572 scaffold_8 + View
Erythranthe guttata Migut.L01150 scaffold_12 + View
Eutrema salsugineum Thhalv10005541m.g PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_6 - View
Eutrema salsugineum Thhalv10009406m.g PTHR24015:SF469 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN scaffold_5 - View
Eutrema salsugineum Thhalv10019713m.g PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_9 - View
Fragaria x ananassa FAN18G1311 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb5-1 + View
Fragaria x ananassa FAN22G1806 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb4-1 + View
Fragaria x ananassa FAN13G2604 PF14432 - DYW family of nucleic acid deaminases (DYW_deaminase) Fvb5-2 + View
Fragaria vesca FvH4_4g28920 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb4 + View
Fragaria vesca FvH4_5g13240 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb5 + View
Gossypium hirsutum Gohir.A13G089100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A13 - View
Gossypium hirsutum Gohir.D13G086500 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D13 - View
Glycine max Glyma.08G252400 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm08 + View
Glycine max Glyma.06G206900 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm06 - View
Glycine max Glyma.04G158200 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Gm04 + View
Glycine max Glyma.18G275000 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm18 + View
Gossypium raimondii Gorai.013G098500 Chr13 - View
Hydrangea macrophylla Hma1.2p1_0744F.1_g211710 Hma1.2p1_0744F.1 + View
Lotus japonicus Lj1g0005612 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) chr1 + View
Lonicera japonica Lj3C1026T2 GWHAAZE00000003 + View
Lonicera japonica Lj9P436T22 GWHAAZE00000009 + View
Lonicera japonica Lj5C98T12 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_5_24421 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Lsat_1_v8_lg_5 - View
Malus domestica MD16G1053700 pentatricopeptide (PPR) repeat-containing protein Chr16 + View
Malus domestica MD17G1068000 Pentatricopeptide repeat (PPR) superfamily protein Chr17 - View
Malus domestica MD06G1207000 Pentatricopeptide repeat (PPR) superfamily protein Chr06 - View
Malus domestica MD13G1054800 pentatricopeptide (PPR) repeat-containing protein Chr13 + View
Manihot esculenta Manes.14G092100 Chromosome14 - View
Manihot esculenta Manes.01G024600 Chromosome01 + View
Manihot esculenta Manes.02G061600 Chromosome02 - View
Manihot esculenta Manes.01G009300 Chromosome01 - View
Medicago truncatula Medtr6g016020 PPR containing plant-like protein chr6 + View
Medicago truncatula Medtr2g058990 pentatricopeptide (PPR) repeat protein chr2 + View
Nelumbo nucifera Nn4g23581 chr4 - View
Nicotiana tabacum Nitab4.5_0002805g0180 Unknown Nitab4.5_0002805 - View
Nicotiana tabacum Nitab4.5_0000646g0250 Pentatricopeptide repeat, Tetratricopeptide-like helical Nitab4.5_0000646 + View
Olea europaea Oeu062193.1 chr10 - View
Olea europaea Oeu048112.5 chr12 - View
Petunia axillaris Peaxi162Scf00017g00319 Pentatricopeptide repeat-containing protein Peaxi162Scf00017 + View
Petunia axillaris Peaxi162Scf00188g00083 Pentatricopeptide repeat-containing protein Peaxi162Scf00188 + View
Punica granatum PGR083G0726 NC_045133.1 - View
Punica granatum PGR102G3199 NC_045129.1 - View
Punica granatum PGR004G1382 NC_045131.1 + View
Prunus persica Prupe.1G297100 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp01 - View
Prunus persica Prupe.5G211400 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp05 - View
Papaver somniferum PSO478G2081 NC_039361.1 + View
Papaver somniferum PSO017G5766 NC_039362.1 - View
Populus trichocarpa Potri.015G047600 PF01535//PF12854//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr15 + View
Populus trichocarpa Potri.008G113101 PF01535 - PPR repeat (PPR) Chr08 - View
Phaseolus vulgaris Phvul.004G044000 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr04 + View
Phaseolus vulgaris Phvul.009G204200 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr09 + View
Quercus lobata QL03p019094 3 - View
Quercus lobata QL10p021422 10 - View
Rosa chinensis RcHm_v2.0_Chr4g0437061 RcHm_v2.0_Chr4 + View
Rosa chinensis RcHm_v2.0_Chr7g0183921 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim09G0119200 chr09 + View
Rhododendron simsii Rhsim10G0061100 chr10 - View
Rhododendron simsii Rhsim12G0146900 chr12 + View
Striga asiatica SGA_v2.0_scaffold16G07838 scaffold16 - View
Striga asiatica SGA_v2.0_scaffold4G02350 scaffold4 + View
Salix brachista Sabra10G0104700 GWHAAZH00000010 + View
Salix brachista Sabra15G0079400 GWHAAZH00000015 - View
Salix brachista Sabra04G0073200 GWHAAZH00000004 - View
Sechium edule Sed0005923 LG06 - View
Sechium edule Sed0018442 LG01 - View
Sechium edule Sed0015333 LG08 - View
Sechium edule Sed0022984 LG07 + View
Solanum lycopersicum Solyc03g114660.1 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3A1V3_CAPAN) SL4.0ch03 + View
Schrenkiella parvula Sp1g12560 3.1.27.1 - Ribonuclease T(2) / Ribonuclease T2 ch1-1 - View
Schrenkiella parvula Sp1g16430 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) ch1-1 + View
Schrenkiella parvula Sp7g31850 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch7-5 + View
Schrenkiella parvula Sp2g14680 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch2-4 + View
Schrenkiella parvula Sp5g24070 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch5-6 + View
Solanum pennellii Sopen05g006430 pentatricopeptide (PPR) repeat-containing protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein Spenn-ch05 + View
Solanum pennellii Sopen03g033730 Pentatricopeptide repeat (PPR) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400019658 Pentatricopeptide repeat-containing protein ST4.03ch05 - View
Solanum tuberosum PGSC0003DMG402024517 Pentatricopeptide repeat-containing protein ST4.03ch03 + View
Trochodendron aralioides TAR371G1263 group13 - View
Trochodendron aralioides TAR622G0399 group8 + View
Trochodendron aralioides TAR374G1557 group12 - View
Tarenaya hassleriana THA.LOC104821986 putative pentatricopeptide repeat-containing protein At1g68930 NW_010966617.1 + View
Tarenaya hassleriana THA.LOC104820420 pentatricopeptide repeat-containing protein At3g47530 isoform X2 NW_010966178.1 - View
Trifolium pratense TPR.G15320 Tp57577_TGAC_v2_scaf_587 - View
Tripterygium wilfordii TWI34G0230 NC_052235.1 + View
Tripterygium wilfordii TWI31G1054 NC_052233.1 + View
Tripterygium wilfordii TWI39G1188 NC_052250.1 + View
Tripterygium wilfordii TWI15G0326 NC_052247.1 + View
Vitis vinifera GSVIVG01008173001 chr17 + View
Vitis vinifera GSVIVG01036511001 chr14 + View