Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0004881 60S acidic ribosomal family protein [Arabidopsis thaliana] Contig1146 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr12.2411 chr12 + View
Acer truncatum Atru.chr5.764 chr5 + View
Actinidia chinensis Actinidia08694 Lachesis_group6 - View
Actinidia chinensis Actinidia34264 Lachesis_group3 + View
Arabidopsis lyrata AL5G29236 scaffold_5 - View
Avicennia marina MSTRG.32 ScioBoG_102831_HRSCAF_103044 - View
Avicennia marina MSTRG.26974 ScioBoG_8578_HRSCAF_8617 + View
Aquilegia oxysepala Aqoxy5G04346 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SY87F3 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) arahy.Tifrunner.gnm1.Arahy.06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5V04YF K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.F1HK63 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) arahy.Tifrunner.gnm1.Arahy.10 - View
Arabidopsis thaliana AT5G24510 60S acidic ribosomal protein family 60S acidic ribosomal protein family%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translational elongation%3B LOCATED IN: cytosolic ribosome%2C ribosome%3B EXPRESSED IN: inflorescence meristem%2C flower%3B EXPRESSED DURING: petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813)%3B BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT1G01100.3)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Beta vulgaris EL10Ac1g00188 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Chr1_EL10_PGA_scaffold3 - View
Capsicum annuum CAN.G303.12 PGAv.1.6.scaffold303 + View
Cannabis sativa CANSAT21G1733 NC_044374.1 + View
Cicer arietinum L. Ca_16773_v3 Ca_LG5_v3 - View
Corylus avellana Haze_15731 Similar to RPP1A: 60S acidic ribosomal protein P1-1 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc02_g00860 60S acidic ribosomal protein P1-2 chr2 - View
Citrus clementina Ciclev10022792m.g scaffold_3 + View
Ceratophyllum demersum CDE04G0844 2 + View
Ceratophyllum demersum CDE12G0429 10 - View
Ceratophyllum demersum CDE11G0349 9 + View
Carpinus fangiana Cfa016165 Cfa06 - View
Cardamine hirsuta CARHR158420 60s acidic ribosomal protein P1 Chr5 - View
Carya illinoinensis CiPaw.06G041600 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Chr06 - View
Citrullus lanatus ClCG01G000090 60S acidic ribosomal family protein CG_Chr01 - View
Corchorus olitorius COL.COLO4_14364 Ribosomal protein 60S AWUE01015415.1 + View
Carica papaya Cpa.g.sc3.158 supercontig_3 - View
Chenopodium quinoa AUR62004559 RPP1A: 60S acidic ribosomal protein P1 C_Quinoa_Scaffold_4250 + View
Cucumis sativus L. CsaV3_5G000080 60S acidic ribosomal protein P1-like chr5 + View
Durio zibethinus Duzib138G0036 NW_019167893.1 + View
Durio zibethinus Duzib084G1446 NW_019167827.1 - View
Durio zibethinus Duzib068G1267 NW_019167838.1 - View
Durio zibethinus Duzib205G0688 NW_019168381.1 - View
Erigeron canadensis ECA232G3007 Conyza_canadensis_scaffold:2 + View
Eucalyptus grandis Eucgr.K00427 Chr11 + View
Eucalyptus grandis Eucgr.A01408 Chr01 + View
Erythranthe guttata Migut.F00148 scaffold_6 + View
Eutrema salsugineum Thhalv10010937m.g K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) scaffold_16 + View
Eutrema salsugineum Thhalv10005602m.g K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) scaffold_6 - View
Fragaria x ananassa FAN03G1785 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Fvb7-3 - View
Fragaria x ananassa FAN10G2299 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Fvb7-1 + View
Fragaria vesca FvH4_7g17620 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Fvb7 + View
Fragaria vesca FvH4_7g32851 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Fvb7 + View
Gossypium hirsutum Gohir.A09G186600 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) A09 + View
Gossypium hirsutum Gohir.D07G138600 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) D07 - View
Gossypium hirsutum Gohir.A11G100900 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) A11 + View
Gossypium hirsutum Gohir.D09G181500 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) D09 + View
Gossypium hirsutum Gohir.A07G133900 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) A07 - View
Glycine max Glyma.04G229000 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Gm04 + View
Glycine max Glyma.06G135800 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Gm06 - View
Glycine max Glyma.19G259800 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Gm19 + View
Gossypium raimondii Gorai.007G112800 Chr07 + View
Gossypium raimondii Gorai.006G203500 Chr06 + View
Gossypium raimondii Gorai.001G150600 Chr01 - View
Lupinus albus Lalb_Chr11g0067371 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Lalb_Chr11 - View
Lupinus albus Lalb_Chr23g0271911 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Lalb_Chr23 - View
Lupinus albus Lalb_Chr08g0239701 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Lalb_Chr08 + View
Lotus japonicus Lj1g0005209 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) chr1 + View
Lotus japonicus Lj1g0000094 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) chr1 - View
Lotus japonicus Lj3g0003609 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) chr3 - View
Lactuca sativa Lsat_1_v5_gn_9_50080 Lsat_1_v8_lg_9 + View
Magnolia biondii MBI04_g22060_MAGBIO AED:0.02 Chr04 - View
Malus domestica MD07G1159200 60S acidic ribosomal protein family Chr07 + View
Malus domestica MD01G1228000 60S acidic ribosomal protein family Chr01 + View
Malus domestica MD07G1298500 60S acidic ribosomal protein family Chr07 + View
Manihot esculenta Manes.05G016600 Chromosome05 - View
Manihot esculenta Manes.01G240101 Chromosome01 - View
Medicago truncatula Medtr3g092600 60S acidic ribosomal protein chr3 - View
Nicotiana tabacum Nitab4.5_0000319g0170 Ribosomal protein L12 family, Ribosomal protein L10/L12 Nitab4.5_0000319 - View
Olea europaea Oeu055386.1 chr12 + View
Olea europaea Oeu061024.1 chr18 + View
Punica granatum PGR042G0196 NC_045130.1 - View
Punica granatum PGR142G1485 NC_045128.1 - View
Prunus persica Prupe.2G318300 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Pp02 + View
Pisum sativum Psat5g072320 60s Acidic ribosomal protein chr5LG3 + View
Papaver somniferum PSO063G4222 NC_039364.1 + View
Populus trichocarpa Potri.015G004700 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Chr15 + View
Populus trichocarpa Potri.014G105400 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Chr14 + View
Populus trichocarpa Potri.012G021700 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Chr12 - View
Phaseolus vulgaris Phvul.009G045800 K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Chr09 + View
Quercus lobata QL08p047176 8 + View
Quercus lobata QL09p007234 9 - View
Rosa chinensis RcHm_v2.0_Chr1g0361051 RcHm_v2.0_Chr1 + View
Rosa chinensis RcHm_v2.0_Chr1g0382801 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim03G0214800 chr03 + View
Rhododendron simsii Rhsim02G0253500 chr02 + View
Striga asiatica SGA_v2.0_scaffold44G16848 scaffold44 - View
Striga asiatica SGA_v2.0_scaffold18G08469 scaffold18 - View
Salvia bowleyana SalBow2G2430 GWHASIU00000007 - View
Sechium edule Sed0013707 LG13 - View
Sechium edule Sed0019700 LG05 - View
Solanum lycopersicum Solyc03g082375.1 60S acidic ribosomal protein P1 (AHRD V3.3 *** A0A2G3A027_CAPAN) SL4.0ch03 - View
Solanum pennellii Sopen03g022100 60S acidic ribosomal protein P1 (L12) - Zea mays (Maize), 60S acidic ribosomal protein family | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translational elongation | LOCATED IN: cytosolic ribosome, ribosome | EXPRESSED IN: inflorescence meristem, flower | EXPRESSED DURING: petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S | BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family Spenn-ch03 - View
Trochodendron aralioides TAR374G0970 group12 + View
Trochodendron aralioides TAR629G0812 group0 + View
Theobroma cacao Thecc.01G333600 60S acidic ribosomal protein family Chromosome_1 - View
Theobroma cacao Thecc.03G207900 Chromosome_3 + View
Tarenaya hassleriana THA.LOC104815135 60S acidic ribosomal protein P1-like NW_010965541.1 - View
Trifolium pratense TPR.G4680 Tp57577_TGAC_v2_LG6 - View
Tripterygium wilfordii TWI59G0147 NC_052248.1 - View
Tripterygium wilfordii TWI14G1364 NC_052249.1 + View
Vaccinium macrocarpon vmacro10156 Similar to RPP1B: 60S acidic ribosomal protein P1-2 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro06434 Similar to RPP1A: 60S acidic ribosomal protein P1 (Zea mays OX%3D4577) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1309G0360 CM024072.1 + View
Vitis vinifera GSVIVG01019679001 chr2 + View
Vitis vinifera GSVIVG01027436001 chr15 - View
Vitis vinifera GSVIVG01038637001 chr16 - View