Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G7540 LG-2 - View
Actinidia chinensis Actinidia31184 Lachesis_group12 - View
Arabidopsis lyrata AL6G25930 scaffold_6 + View
Avicennia marina MSTRG.4412 ScioBoG_102837_HRSCAF_103074 + View
Amaranthus hybridus Ah.02g131290 Probable pectate lyase 3 (EC 4.2.2.2) (Pectate lyase A2) AmaHy_arrow1_Scaffold_2 + View
Amaranthus hybridus Ah.11g048740 AmaHy_arrow1_Scaffold_11 + View
Aquilegia oxysepala Aqoxy3G03279 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.RB3340 4.2.2.2 - Pectate lyase / PPase-N arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SR4TTD PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YDM37B PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED arahy.Tifrunner.gnm1.Arahy.01 - View
Arabidopsis thaliana AT1G14420 Pectate lyase family protein AT59%3B FUNCTIONS IN: lyase activity%2C pectate lyase activity%3B INVOLVED IN: plant-type cell wall organization%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectate lyase%2C N-terminal (InterPro:IPR007524)%2C AmbAllergen (InterPro:IPR018082)%2C Pectate lyase/Amb allergen (InterPro:IPR002022)%2C Pectin lyase fold (InterPro:IPR012334)%3B BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT2G02720.1)%3B Has 1736 Blast hits to 1725 proteins in 285 species: Archae - 2%3B Bacteria - 722%3B Metazoa - 0%3B Fungi - 281%3B Plants - 703%3B Viruses - 0%3B Other Eukaryotes - 28 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT2G02720 Pectate lyase family protein Pectate lyase family protein%3B FUNCTIONS IN: lyase activity%2C pectate lyase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectate lyase%2C N-terminal (InterPro:IPR007524)%2C AmbAllergen (InterPro:IPR018082)%2C Pectate lyase/Amb allergen (InterPro:IPR002022)%2C Pectin lyase fold (InterPro:IPR012334)%3B BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT1G14420.1)%3B Has 1746 Blast hits to 1737 proteins in 278 species: Archae - 0%3B Bacteria - 753%3B Metazoa - 0%3B Fungi - 264%3B Plants - 699%3B Viruses - 0%3B Other Eukaryotes - 30 (source: NCBI BLink). Chr2 + View
Amborella trichopoda ATR1120G164 AmTr_v1.0_scaffold00078 + View
Brassica carinata BcaC05g25344 ChrC05 - View
Brassica carinata BcaB01g05083 ChrB01 - View
Brassica carinata BcaC06g34045 ChrC06 - View
Brassica carinata BcaB08g34394 ChrB08 - View
Brassica napus C09p62040 C09 - View
Brassica napus A03p06940 A03 + View
Brassica napus A06p10440 A06 - View
Brassica napus A06p43530 A06 - View
Brassica napus C03p07930 C03 + View
Brassica napus C07p33330 C07 + View
Brassica oleracea BolC3t13290H C3 + View
Brassica oleracea BolC2t06682H C2 + View
Brassica rapa BraA06t24224Z A06 - View
Brassica rapa BraA03t10015Z A03 + View
Brassica rapa BraA06t27238Z A06 - View
Capsicum annuum CAN.G279.14 PGAv.1.6.scaffold279 + View
Cannabis sativa CANSAT64G0768 NC_044379.1 + View
Cicer arietinum L. Ca_04745_v3 Ca_LG2_v3 + View
Corylus avellana Haze_12043 Similar to LAT59: Probable pectate lyase P59 (Solanum lycopersicum OX%3D4081) 9 - View
Coffea canephora Cc11_g13410 Pectate lyase chr11 - View
Coffea canephora Cc07_g03030 Probable pectate lyase P59 chr7 + View
Citrus clementina Ciclev10013775m.g scaffold_6 + View
Carpinus fangiana Cfa009026 Cfa03 - View
Cardamine hirsuta CARHR014860 Pectate lyase family protein Chr1 - View
Cardamine hirsuta CARHR198210 Pectate lyase family protein Chr6 - View
Cardamine hirsuta CARHR075760 Pectate lyase family protein Chr3 + View
Carya illinoinensis CiPaw.05G139300 PF00544//PF04431 - Pectate lyase (Pec_lyase_C) // Pectate lyase, N terminus (Pec_lyase_N) Chr05 - View
Carya illinoinensis CiPaw.06G081100 PF04431 - Pectate lyase, N terminus (Pec_lyase_N) Chr06 + View
Carya illinoinensis CiPaw.11G039000 PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED Chr11 + View
Citrullus lanatus ClCG05G024540 Pectate lyase family protein CG_Chr05 - View
Cucumis melo MELO3C012072.2 Pectate lyase chr10 - View
Corchorus olitorius COL.COLO4_23045 Pectate lyase/Amb allergen AWUE01018145.1 - View
Carica papaya Cpa.g.sc17.208 supercontig_17 - View
Carica papaya Cpa.g.sc5.270 supercontig_5 - View
Chenopodium quinoa AUR62028829 Pectate lyase C_Quinoa_Scaffold_2837 - View
Chenopodium quinoa AUR62005732 At3g01270: Probable pectate lyase 7 C_Quinoa_Scaffold_1214 + View
Capsella rubella Carub.0001s1413 PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED scaffold_1 - View
Capsella rubella Carub.0005s0163 PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED scaffold_5 + View
Cucumis sativus L. CsaV3_5G032410 Pectate lyase chr5 + View
Daucus carota DCAR_007134 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_027390 hypothetical protein DCARv2_Chr8 - View
Davidia involucrata Dinv34206 GWHABJS00000008 + View
Davidia involucrata Dinv19920 GWHABJS00000006 - View
Durio zibethinus Duzib205G0523 NW_019168381.1 + View
Durio zibethinus Duzib264G0102 NW_019167960.1 - View
Durio zibethinus Duzib248G1631 NW_019168048.1 + View
Durio zibethinus Duzib251G0120 NW_019167971.1 - View
Erigeron canadensis ECA246G2524 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.G02541 Chr07 - View
Erythranthe guttata Migut.E00111 scaffold_5 - View
Erythranthe guttata Migut.L01335 scaffold_12 - View
Erythranthe guttata Migut.D01853 scaffold_4 - View
Fragaria x ananassa FAN02G2680 PF00544//PF04431 - Pectate lyase (Pec_lyase_C) // Pectate lyase, N terminus (Pec_lyase_N) Fvb6-4 - View
Fragaria x ananassa FAN22G0892 PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED Fvb4-1 - View
Fragaria x ananassa FAN09G2043 PF00544//PF04431 - Pectate lyase (Pec_lyase_C) // Pectate lyase, N terminus (Pec_lyase_N) Fvb6-2 + View
Fragaria x ananassa FAN13G1311 PTHR31683:SF7 - PECTATE LYASE 19-RELATED Fvb5-2 - View
Fragaria x ananassa FAN08G2663 PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED Fvb5-3 + View
Fragaria x ananassa FAN05G3066 PF00544//PF04431 - Pectate lyase (Pec_lyase_C) // Pectate lyase, N terminus (Pec_lyase_N) Fvb6-3 + View
Fragaria x ananassa FAN07G1310 PTHR31683:SF7 - PECTATE LYASE 19-RELATED Fvb4-4 - View
Fragaria vesca FvH4_4g31900 PTHR31683:SF7 - PECTATE LYASE 19-RELATED Fvb4 - View
Gossypium hirsutum Gohir.A13G071400 PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED A13 + View
Gossypium hirsutum Gohir.A09G021600 K01728 - pectate lyase (pel) A09 + View
Glycine max Glyma.08G296900 PF04431 - Pectate lyase, N terminus (Pec_lyase_N) Gm08 + View
Glycine max Glyma.02G020600 PF04431 - Pectate lyase, N terminus (Pec_lyase_N) Gm02 + View
Glycine max Glyma.01G042700 PF04431 - Pectate lyase, N terminus (Pec_lyase_N) Gm01 + View
Lupinus albus Lalb_Chr06g0175471 PF00544//PF04431 - Pectate lyase (Pec_lyase_C) // Pectate lyase, N terminus (Pec_lyase_N) Lalb_Chr06 + View
Lupinus albus Lalb_Chr10g0098001 PF00544//PF04431 - Pectate lyase (Pec_lyase_C) // Pectate lyase, N terminus (Pec_lyase_N) Lalb_Chr10 + View
Lotus japonicus Lj2g0024183 PF00544//PF04431 - Pectate lyase (Pec_lyase_C) // Pectate lyase, N terminus (Pec_lyase_N) chr2 + View
Lotus japonicus Lj1g0000486 PTHR31683:SF7 - PECTATE LYASE 19-RELATED chr1 + View
Lotus japonicus Lj2g0004378 PF04431 - Pectate lyase, N terminus (Pec_lyase_N) chr2 + View
Lonicera japonica Lj6P793T70 GWHAAZE00000006 - View
Lactuca sativa Lsat_1_v5_gn_8_54161 Lsat_1_v8_lg_8 - View
Lactuca sativa Lsat_1_v5_gn_3_51401 Lsat_1_v8_lg_3 + View
Lactuca sativa Lsat_1_v5_gn_2_88600 PTHR31683:SF7 - PECTATE LYASE 19-RELATED Lsat_1_v8_lg_2 - View
Malus domestica MD13G1078400 Pectate lyase family protein Chr13 - View
Malus domestica MD06G1188600 Pectate lyase family protein Chr06 + View
Malus domestica MD16G1078000 Pectate lyase family protein Chr16 - View
Manihot esculenta Manes.01G189700 Chromosome01 - View
Manihot esculenta Manes.05G097300 Chromosome05 + View
Manihot esculenta Manes.15G176052 Chromosome15 + View
Medicago truncatula Medtr8g468980 pectate lyase-like protein chr8 - View
Medicago truncatula Medtr5g038490 pectate lyase P59-like protein chr5 + View
Medicago truncatula Medtr7g009900 pectate lyase, putative chr7 - View
Nelumbo nucifera Nn3g17138 chr3 + View
Nelumbo nucifera Nn4g23058 chr4 + View
Petunia axillaris Peaxi162Scf00209g00330 Pectin lyase-like superfamily protein Peaxi162Scf00209 - View
Punica granatum PGR083G1983 NC_045133.1 + View
Prunus persica Prupe.1G268500 PTHR31683:SF7 - PECTATE LYASE 19-RELATED Pp01 + View
Pisum sativum Psat2g123040 Pollen allergen Amb family signature chr2LG1 + View
Papaver somniferum PSO017G2562 NC_039362.1 + View
Phaseolus vulgaris Phvul.009G189800 PTHR31683:SF7 - PECTATE LYASE 19-RELATED Chr09 - View
Phaseolus vulgaris Phvul.003G069100 4.2.2.2 - Pectate lyase / PPase-N Chr03 - View
Quercus lobata QL10p015668 10 + View
Quercus lobata QL03p065544 3 - View
Rosa chinensis RcHm_v2.0_Chr7g0180651 RcHm_v2.0_Chr7 + View
Rosa chinensis RcHm_v2.0_Chr4g0440551 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim08G0159400 chr08 - View
Salvia bowleyana SalBow2G2225 GWHASIU00000007 + View
Simmondsia chinensis Sc11g0001720 GWHAASQ00000011 + View
Simmondsia chinensis Sc04g0008430 GWHAASQ00000004 - View
Simmondsia chinensis Sc14g0008340 GWHAASQ00000014 - View
Sechium edule Sed0011821 LG06 - View
Solanum lycopersicum Solyc03g113150.3 Pectate lyase (AHRD V3.3 *** A0A2G3CYI8_CAPCH) SL4.0ch03 + View
Solanum lycopersicum Solyc02g067450.4 Pectate lyase (AHRD V3.3 *** A0A1U8FTH1_CAPAN) SL4.0ch02 - View
Schrenkiella parvula Sp6g28960 PTHR31683:SF7 - PECTATE LYASE 19-RELATED ch6-6 - View
Schrenkiella parvula Sp1g12790 PTHR31683//PTHR31683:SF7 - FAMILY NOT NAMED // PECTATE LYASE 19-RELATED ch1-1 - View
Solanum pennellii Sopen05g003050 AT59 | FUNCTIONS IN: lyase activity, pectate lyase activity | INVOLVED IN: plant-type cell wall organization | LOCATED IN: endomembrane system | EXPRESSED IN: 9 plant structures | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Pectate lyase, N-terminal , AmbAllergen , Pectate lyase/Amb allergen , Pectin lyase fold | BEST Arabidopsis thaliana protein match is: Pectate lyase family protein Spenn-ch05 + View
Solanum pennellii Sopen03g032210 Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily), AT59 | FUNCTIONS IN: lyase activity, pectate lyase activity | INVOLVED IN: plant-type cell wall organization | LOCATED IN: endomembrane system | EXPRESSED IN: 9 plant structures | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Pectate lyase, N-terminal , AmbAllergen , Pectate lyase/Amb allergen , Pectin lyase fold | BEST Arabidopsis thaliana protein match is: Pectate lyase family protein Spenn-ch03 + View
Solanum pennellii Sopen06g027320 Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily), Pectate lyase family protein | FUNCTIONS IN: lyase activity, pectate lyase activity | INVOLVED IN: biological_process unknown | LOCATED IN: endomembrane system | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Pectate lyase, N-terminal , AmbAllergen , Pectate lyase/Amb allergen , Pectin lyase fold | BEST Arabidopsis thaliana protein match is: Pectate lyase family protein Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG402017626 Pectate lyase ST4.03ch05 - View
Solanum tuberosum PGSC0003DMG400001311 Pectate lyase P59 ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400018142 Pectate lyase ST4.03ch03 + View
Trochodendron aralioides TAR622G0931 group8 - View
Theobroma cacao Thecc.02G354500 Pectate lyase family protein Chromosome_2 - View
Tarenaya hassleriana THA.LOC104822370 probable pectate lyase 19 NW_010966665.1 - View
Tripterygium wilfordii TWI75G0157 NC_052253.1 + View
Tripterygium wilfordii TWI18G0076 NC_052241.1 - View
Vaccinium macrocarpon vmacro16330 Similar to LAT59: Probable pectate lyase P59 (Solanum lycopersicum OX%3D4081) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G3109 CM024069.1 - View
Vitis vinifera GSVIVG01011348001 chr14 + View
Vitis vinifera GSVIVG01008053001 chr17 + View
Vitis vinifera GSVIVG01020068001 chr1 + View