Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0004229 ubiquitin-protein ligase, putative [Ricinus communis] Chr8 + View
CSS0028963 ubiquitin-protein ligase, putative [Ricinus communis] Contig1177 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G6200 LG-6 - View
Acer truncatum Atru.chr10.1549 chr10 - View
Actinidia chinensis Actinidia35608 Lachesis_group2 + View
Actinidia chinensis Actinidia24405 Lachesis_group19 - View
Actinidia chinensis Actinidia16767 Lachesis_group12 + View
Arabidopsis lyrata AL4G30190 scaffold_4 + View
Arabidopsis lyrata AL1G43150 scaffold_1 + View
Avicennia marina MSTRG.7436 ScioBoG_102840_HRSCAF_103099 + View
Avicennia marina MSTRG.13237 ScioBoG_17730_HRSCAF_17811 + View
Avicennia marina MSTRG.16172 ScioBoG_19538_HRSCAF_19626 + View
Amaranthus hybridus Ah.09g233210 AmaHy_arrow1_Scaffold_9 - View
Aquilegia oxysepala Aqoxy4G00236 CHR04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LM2DEJ PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.579CME PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 arahy.Tifrunner.gnm1.Arahy.10 - View
Arabidopsis thaliana AT1G29340 plant U-box 17 Encodes a protein containing a UND%2C a U-box%2C and an ARM domain. This protein has E3 ubiquitin ligase activity. It is required for cell death and full resistance specified by Arabidopsis RPM1 and RPS4 resistance proteins against Pseudomonas syringae pv tomato. plant U-box 17 (PUB17)%3B FUNCTIONS IN: ubiquitin-protein ligase activity%3B INVOLVED IN: defense response to fungus%2C incompatible interaction%2C defense response%2C incompatible interaction%2C apoptosis%2C protein ubiquitination%3B LOCATED IN: ubiquitin ligase complex%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo (InterPro:IPR000225)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G01830.1)%3B Has 4178 Blast hits to 3456 proteins in 244 species: Archae - 2%3B Bacteria - 18%3B Metazoa - 476%3B Fungi - 388%3B Plants - 2844%3B Viruses - 3%3B Other Eukaryotes - 447 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB07g32528 ChrB07 + View
Brassica carinata BcaB03g13891 ChrB03 - View
Brassica carinata BcaC05g26960 ChrC05 + View
Brassica carinata BcaC06g35425 ChrC06 + View
Brassica carinata BcaB03g12156 ChrB03 + View
Brassica carinata BcaC01g00101 ChrC01 + View
Brassica napus C07p16330 C07 - View
Brassica napus C03p75790 C03 + View
Brassica oleracea BolC3t19837H C3 + View
Brassica oleracea BolC7t42126H C7 - View
Brassica oleracea BolC5t31540H C5 + View
Brassica rapa BraA08t34467Z A08 - View
Capsicum annuum CAN.G411.41 PGAv.1.6.scaffold411 - View
Cicer arietinum L. Ca_00476_v3 Ca_LG1_v3 + View
Corylus avellana Haze_05389 Similar to PUB17: U-box domain-containing protein 17 (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc02_g15710 U-box domain-containing protein 17 chr2 + View
Citrus clementina Ciclev10014430m.g scaffold_2 + View
Ceratophyllum demersum CDE04G1811 2 - View
Ceratophyllum demersum CDE10G1179 8 - View
Ceratophyllum demersum CDE10G0830 8 - View
Carpinus fangiana Cfa001105 Cfa01 + View
Cardamine hirsuta CARHR028670 U-box domain-containing protein Chr1 + View
Cardamine hirsuta CARHR128350 U-box domain-containing protein Chr4 + View
Carya illinoinensis CiPaw.10G103600 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 Chr10 - View
Citrullus lanatus ClCG03G007420 U-box domain-containing protein CG_Chr03 - View
Cucumis melo MELO3C002678.2 RING-type E3 ubiquitin transferase chr12 - View
Corchorus olitorius COL.COLO4_31220 Armadillo AWUE01020829.1 - View
Chenopodium quinoa AUR62039488 PUB17: U-box domain-containing protein 17 C_Quinoa_Scaffold_1037 + View
Chenopodium quinoa AUR62041812 PUB17: U-box domain-containing protein 17 C_Quinoa_Scaffold_4338 - View
Chenopodium quinoa AUR62006365 PUB16: U-box domain-containing protein 16 C_Quinoa_Scaffold_1001 + View
Capsella rubella Carub.0001s2756 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 scaffold_1 + View
Capsella rubella Carub.0004s1592 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 scaffold_4 + View
Cucumis sativus L. CsaV3_1G033060 RING-type E3 ubiquitin transferase chr1 - View
Daucus carota DCAR_007929 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_005164 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_027971 hypothetical protein DCARv2_Chr8 + View
Davidia involucrata Dinv32330 GWHABJS00000016 - View
Davidia involucrata Dinv12742 GWHABJS00000020 - View
Durio zibethinus Duzib192G0956 NW_019168037.1 + View
Durio zibethinus Duzib160G0259 NW_019168015.1 - View
Durio zibethinus Duzib235G1200 NW_019167982.1 - View
Erigeron canadensis ECA236G2405 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.D00434 Chr04 - View
Erythranthe guttata Migut.H01405 scaffold_8 - View
Erythranthe guttata Migut.M01002 scaffold_13 + View
Eutrema salsugineum Thhalv10006853m.g PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 scaffold_5 - View
Fragaria x ananassa FAN25G0428 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 Fvb3-1 + View
Fragaria x ananassa FAN21G0489 PTHR23315//PTHR23315:SF76 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 17 Fvb3-2 - View
Fragaria x ananassa FAN16G1388 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 Fvb3-3 - View
Fragaria x ananassa FAN11G1399 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 Fvb3-4 + View
Fragaria vesca FvH4_3g07211 Fvb3 - View
Gossypium hirsutum Gohir.D10G034700 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 D10 - View
Gossypium hirsutum Gohir.A06G134000 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 A06 + View
Gossypium hirsutum Gohir.A10G034000 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 A10 - View
Gossypium hirsutum Gohir.D06G139000 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 D06 + View
Glycine max Glyma.15G086200 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 Gm15 + View
Glycine max Glyma.08G119700 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 Gm08 + View
Glycine max Glyma.05G162100 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 Gm05 + View
Glycine max Glyma.13G225900 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 Gm13 - View
Gossypium raimondii Gorai.011G036500 Chr11 - View
Hydrangea macrophylla Hma1.2p1_0508F.1_g168700 Hma1.2p1_0508F.1 - View
Lupinus albus Lalb_Chr07g0186221 PTHR23315//PTHR23315:SF76 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 17 Lalb_Chr07 - View
Lupinus albus Lalb_Chr18g0054801 PTHR23315//PTHR23315:SF76 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 17 Lalb_Chr18 + View
Lupinus albus Lalb_Chr15g0086361 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 Lalb_Chr15 + View
Lotus japonicus Lj6g0009569 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 chr6 - View
Lonicera japonica Lj2P316T58 GWHAAZE00000002 - View
Lonicera japonica Lj1P1176T31 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_4_48300 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 Lsat_1_v8_lg_4 - View
Lactuca sativa Lsat_1_v5_gn_7_25401 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 Lsat_1_v8_lg_7 + View
Magnolia biondii MBI06_g18694_MAGBIO AED:0.25 Chr06 - View
Magnolia biondii MBI07_g00449_MAGBIO AED:0.35 Chr07 - View
Malus domestica MD00G1008100 plant U-box 17 Chr00 - View
Malus domestica MD10G1274600 plant U-box 17 Chr10 - View
Manihot esculenta Manes.16G042400 Chromosome16 + View
Manihot esculenta Manes.17G060000 Chromosome17 + View
Medicago truncatula Medtr2g018010 plant U-box protein chr2 + View
Nelumbo nucifera Nn6g34482 chr6 + View
Nelumbo nucifera Nn3g21091 chr3 + View
Olea europaea Oeu060184.1 chr21 + View
Olea europaea Oeu040927.1 chr13 + View
Olea europaea Oeu039872.1 chr16 - View
Olea europaea Oeu043122.1 chr19 + View
Petunia axillaris Peaxi162Scf00112g00072 U-box domain-containing protein 17 Peaxi162Scf00112 + View
Punica granatum PGR042G3463 NC_045130.1 + View
Prunus persica Prupe.4G067800 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 Pp04 + View
Pisum sativum Psat1g194360 U-box domain chr1LG6 - View
Populus trichocarpa Potri.011G071400 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 Chr11 + View
Populus trichocarpa Potri.004G061800 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 Chr04 + View
Phaseolus vulgaris Phvul.002G241800 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 Chr02 + View
Phaseolus vulgaris Phvul.006G171900 PTHR23315:SF76 - U-BOX DOMAIN-CONTAINING PROTEIN 17 Chr06 - View
Quercus lobata QL05p050063 5 + View
Rosa chinensis RcHm_v2.0_Chr5g0011931 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim02G0148300 chr02 - View
Striga asiatica SGA_v2.0_scaffold1G00094 scaffold1 + View
Salvia bowleyana SalBow8G3340 GWHASIU00000004 + View
Salix brachista Sabra04G0041000 GWHAAZH00000004 + View
Salix brachista Sabra11G0056000 GWHAAZH00000011 + View
Simmondsia chinensis Sc17g0005590 GWHAASQ00000017 - View
Simmondsia chinensis Sc05g0006820 GWHAASQ00000005 - View
Sechium edule Sed0003900 LG08 - View
Sechium edule Sed0005132 LG01 + View
Solanum lycopersicum Solyc02g072080.1 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A1E0Y2_SOLTU) SL4.0ch02 - View
Schrenkiella parvula Sp1g25290 PTHR23315//PTHR23315:SF76 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 17 ch1-1 + View
Solanum pennellii Sopen02g021040 Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity. It is required for cell death and full resistance specified by Arabidopsis RPM1 and RPS4 resistance proteins against Pseudomonas syringae pv tomato. | plant U-box 17 (PUB17) | FUNCTIONS IN: ubiquitin-protein ligase activity | INVOLVED IN: defense response to fungus, incompatible interaction, defense response, incompatible interaction, apoptosis, protein ubiquitination | LOCATED IN: ubiquitin ligase complex | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: U box domain , Armadillo-like helical , Armadillo , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400028462 ACRE 276 ST4.03ch02 - View
Trochodendron aralioides TAR626G1211 group3 + View
Theobroma cacao Thecc.06G164500 Plant U-box 17 Chromosome_6 - View
Tarenaya hassleriana THA.LOC104820613 U-box domain-containing protein 17 NW_010966274.1 + View
Tripterygium wilfordii TWI09G0329 NC_052245.1 + View
Utricularia gibba unitig_578.g16464 unitig_578 + View
Vigna mungo VMungo0540G1989 CM024075.1 + View
Vitis vinifera GSVIVG01021265001 chr10 + View