Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0017456 unnamed protein product [Vitis vinifera] Chr1 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.BG.74.p chr5 + View
Actinidia chinensis Actinidia20225 Lachesis_group6 - View
Arabidopsis lyrata AL6G52360 scaffold_6 + View
Avicennia marina MSTRG.20897 ScioBoG_26180_HRSCAF_26306 + View
Avicennia marina MSTRG.27036 ScioBoG_8578_HRSCAF_8617 + View
Amaranthus hybridus Ah.13g070030 Pentatricopeptide repeat-containing protein At4g02750 AmaHy_arrow1_Scaffold_13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.DKHY73 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) arahy.Tifrunner.gnm1.Arahy.12 - View
Arabidopsis thaliana AT4G01030 pentatricopeptide (PPR) repeat-containing protein pentatricopeptide (PPR) repeat-containing protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G20230.1)%3B Has 44944 Blast hits to 14972 proteins in 296 species: Archae - 1%3B Bacteria - 32%3B Metazoa - 191%3B Fungi - 174%3B Plants - 43677%3B Viruses - 0%3B Other Eukaryotes - 869 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaC04g24117 ChrC04 + View
Brassica napus C09p00890 C09 + View
Brassica napus A09p00260 A09 + View
Brassica oleracea BolC9t53023H C9 + View
Brassica rapa BraA09t35753Z A09 + View
Beta vulgaris EL10Ac1g00283 PF14432 - DYW family of nucleic acid deaminases (DYW_deaminase) Chr1_EL10_PGA_scaffold3 - View
Beta vulgaris EL10Ac3g05322 Chr3_EL10_PGA_scaffold7 + View
Capsicum annuum CAN.G986.26 PGAv.1.6.scaffold986 - View
Cannabis sativa CANSAT21G1020 NC_044374.1 - View
Cicer arietinum L. Ca_23554_v3 Ca_LG7_v3 + View
Corylus avellana Haze_15637 Similar to PCMP-H65: Pentatricopeptide repeat-containing protein At4g01030, mitochondrial (Arabidopsis thaliana OX%3D3702) 11 + View
Corylus avellana Haze_00161 Similar to EMB2261: Pentatricopeptide repeat-containing protein At3g49170, chloroplastic (Arabidopsis thaliana OX%3D3702) 1 - View
Citrus clementina Ciclev10006927m.g scaffold_9 - View
Ceratophyllum demersum CDE03G0132 12 + View
Carpinus fangiana Cfa003817 Cfa01 - View
Cardamine hirsuta CARHR249300 Pentatricopeptide repeat-containing protein, putative Chr8 + View
Carya illinoinensis CiPaw.05G195300 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr05 - View
Corchorus olitorius COL.COLO4_06304 hypothetical protein AWUE01012662.1 - View
Carica papaya Cpa.g.sc273.7 supercontig_273 - View
Chenopodium quinoa AUR62004470 PCMP-H65: Pentatricopeptide repeat-containing protein At4g01030, mitochondrial C_Quinoa_Scaffold_4250 + View
Capsella rubella Carub.0006s3608 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_6 - View
Daucus carota DCAR_008658 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv32570 GWHABJS00000020 + View
Durio zibethinus Duzib138G0032 NW_019167893.1 + View
Eucalyptus grandis Eucgr.D02363 Chr04 + View
Erythranthe guttata Migut.B01851 scaffold_2 + View
Erythranthe guttata Migut.F01048 scaffold_6 + View
Erythranthe guttata Migut.F00229 scaffold_6 + View
Fragaria x ananassa FAN03G0723 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb7-3 - View
Fragaria x ananassa FAN10G1067 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb7-1 - View
Fragaria x ananassa FAN10G2078 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb7-1 - View
Fragaria vesca FvH4_7g16210 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb7 + View
Gossypium hirsutum Gohir.D09G177800 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) D09 - View
Gossypium hirsutum Gohir.A07G138400 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A07 - View
Gossypium hirsutum Gohir.A09G183100 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) A09 - View
Gossypium hirsutum Gohir.D07G143433 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D07 - View
Glycine max Glyma.16G026000 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm16 - View
Glycine max Glyma.07G057000 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm07 - View
Gossypium raimondii Gorai.006G199900 Chr06 - View
Helianthus annuus HanXRQChr14g0462951 Probable tetratricopeptide repeat (TPR)-like superfamily protein HanXRQChr14 - View
Lupinus albus Lalb_Chr17g0342491 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lalb_Chr17 + View
Lupinus albus Lalb_Chr23g0271241 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lalb_Chr23 + View
Lotus japonicus Lj3g0009949 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) chr3 - View
Magnolia biondii MBI06_g04295_MAGBIO AED:0.07 Chr06 - View
Malus domestica MD01G1215800 Pentatricopeptide repeat (PPR) superfamily protein Chr01 - View
Malus domestica MD01G1078800 pentatricopeptide (PPR) repeat-containing protein Chr01 + View
Manihot esculenta Manes.05G024400 Chromosome05 - View
Medicago truncatula Medtr8g027810 pentatricopeptide (PPR) repeat protein chr8 - View
Nelumbo nucifera Nn1g01841 chr1 + View
Nicotiana tabacum Nitab4.5_0000838g0030 Pentatricopeptide repeat, Tetratricopeptide-like helical Nitab4.5_0000838 + View
Nicotiana tabacum Nitab4.5_0000258g0060 Pentatricopeptide repeat, Tetratricopeptide-like helical Nitab4.5_0000258 - View
Petunia axillaris Peaxi162Scf00786g00455 Pentatricopeptide repeat-containing protein Peaxi162Scf00786 - View
Punica granatum PGR042G2851 NC_045130.1 + View
Punica granatum PGR031G0706 NC_045127.1 - View
Prunus persica Prupe.2G185700 PF13041//PF14432 - PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp02 + View
Pisum sativum Psat4g160520 DYW family of nucleic acid deaminases chr4LG4 + View
Populus trichocarpa Potri.006G181800 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr06 + View
Populus trichocarpa Potri.014G097000 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr14 + View
Phaseolus vulgaris Phvul.006G112700 3.1.27.1 - Ribonuclease T(2) / Ribonuclease T2 Chr06 + View
Phaseolus vulgaris Phvul.006G027400 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr06 + View
Quercus lobata QL09p009738 9 + View
Rosa chinensis RcHm_v2.0_Chr1g0359241 RcHm_v2.0_Chr1 + View
Rosa chinensis RcHm_v2.0_Chr1g0380161 RcHm_v2.0_Chr1 - View
Rhododendron simsii Rhsim07G0005400 chr07 - View
Salvia bowleyana SalBow4G1264 GWHASIU00000008 + View
Salvia bowleyana SalBow3G4036 GWHASIU00000006 + View
Salix brachista Sabra02G0141700 GWHAAZH00000002 - View
Salix brachista Sabra14G0071100 GWHAAZH00000014 + View
Salix brachista Sabra15G0014200 GWHAAZH00000015 + View
Simmondsia chinensis Sc23g0002190 GWHAASQ00000023 - View
Solanum lycopersicum Solyc01g095600.4 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8GFQ6_CAPAN) SL4.0ch01 + View
Solanum tuberosum PGSC0003DMG400000099 Pentatricopeptide repeat-containing protein, mitochondrial ST4.03ch01 + View
Trochodendron aralioides TAR374G1476 group12 - View
Theobroma cacao Thecc.03G194800 Tetratricopeptide repeat-like superfamily protein Chromosome_3 - View
Theobroma cacao Thecc.01G344700 Pentatricopeptide repeat-containing protein Chromosome_1 - View
Tripterygium wilfordii TWI59G0224 NC_052248.1 + View
Tripterygium wilfordii TWI59G0551 NC_052248.1 + View
Tripterygium wilfordii TWI14G0255 NC_052249.1 - View
Vaccinium macrocarpon vmacro13172 Similar to PCMP-H65: Pentatricopeptide repeat-containing protein At4g01030, mitochondrial (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0331G1179 CM024078.1 - View
Vitis vinifera GSVIVG01027077001 chr15 - View