Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G6550 LG-4 - View
Aethionema arabicum Aa31LG7G5040 LG-7 - View
Acer truncatum Atru.chr13.58 chr13 + View
Actinidia chinensis Actinidia15526 Lachesis_group26 + View
Actinidia chinensis Actinidia17079 Lachesis_group28 + View
Arabidopsis lyrata AL2G36600 scaffold_2 - View
Avicennia marina MSTRG.22081 ScioBoG_3008_HRSCAF_3015 + View
Avicennia marina MSTRG.24518 ScioBoG_4088_HRSCAF_4107 - View
Aquilegia oxysepala Aqoxy6G02997 CHR06 - View
Arabidopsis thaliana AT1G76460 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G20880.2)%3B Has 4261 Blast hits to 4252 proteins in 371 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1989%3B Fungi - 541%3B Plants - 1112%3B Viruses - 30%3B Other Eukaryotes - 589 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G20880 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G76460.1)%3B Has 7701 Blast hits to 7638 proteins in 709 species: Archae - 59%3B Bacteria - 219%3B Metazoa - 3282%3B Fungi - 4%3B Plants - 1889%3B Viruses - 133%3B Other Eukaryotes - 2115 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR0605G253 AmTr_v1.0_scaffold00022 + View
Brassica carinata BcaC06g34844 ChrC06 - View
Brassica carinata BcaB07g32083 ChrB07 - View
Brassica carinata BcaC07g39059 ChrC07 - View
Brassica carinata BcaB03g14296 ChrB03 + View
Brassica carinata BcaC08g47153 ChrC08 - View
Brassica carinata BcaB03g12845 ChrB03 + View
Brassica carinata BcaC05g25997 ChrC05 - View
Brassica carinata BcaC08g47242 ChrC08 + View
Brassica napus A08p29180 A08 + View
Brassica napus C08p20430 C08 - View
Brassica napus A07p15430 A07 + View
Brassica napus C07p22740 C07 + View
Brassica napus C06p50700 C06 - View
Brassica napus C05p19500 C05 - View
Brassica napus A07p42130 A07 - View
Brassica napus A06p16880 A06 - View
Brassica oleracea BolC8t49672H C8 - View
Brassica oleracea BolC5t30652H C5 - View
Brassica oleracea BolC6t40096H C6 - View
Brassica rapa BraA08t34853Z A08 + View
Brassica rapa BraA06t24797Z A06 - View
Brassica rapa BraA07t31742Z A07 - View
Brassica rapa BraA07t29282Z A07 + View
Beta vulgaris EL10Ac1g01869 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Chr1_EL10_PGA_scaffold3 + View
Cannabis sativa CANSAT25G2852 NC_044370.1 + View
Cicer arietinum L. Ca_15383_v3 Ca_LG5_v3 + View
Corylus avellana Haze_22865 Similar to ARP1: Probable RNA-binding protein ARP1 (Arabidopsis thaliana OX%3D3702) 3 - View
Coffea canephora Cc10_g00240 RNA-binding (RRM/RBD/RNP motifs) family protein chr10 + View
Citrus clementina Ciclev10003364m.g scaffold_5 - View
Cardamine hirsuta CARHR070020 RNA-binding protein 24-B Chr2 - View
Cardamine hirsuta CARHR021310 RNA binding protein, putative Chr1 - View
Carya illinoinensis CiPaw.07G133300 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Chr07 + View
Carya illinoinensis CiPaw.08G077300 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Chr08 - View
Citrullus lanatus ClCG08G009160 RNA-binding protein 24-B CG_Chr08 + View
Cucumis melo MELO3C026514.2 RNA-binding protein 24-A chr03 + View
Carica papaya Cpa.g.sc26.10 supercontig_26 + View
Chenopodium quinoa AUR62035172 RBM38: RNA-binding protein 38 C_Quinoa_Scaffold_2624 - View
Chenopodium quinoa AUR62024094 ARP1: Probable RNA-binding protein ARP1 C_Quinoa_Scaffold_4119 + View
Capsella rubella Carub.0002s2338 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) scaffold_2 - View
Daucus carota DCAR_013943 hypothetical protein DCARv2_Chr4 + View
Daucus carota DCAR_009860 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_016799 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv05494 GWHABJS00000011 - View
Davidia involucrata Dinv13765 GWHABJS00000020 + View
Davidia involucrata Dinv40219 GWHABJS00000014 + View
Durio zibethinus Duzib116G0655 NW_019167949.1 + View
Erigeron canadensis ECA238G0875 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA232G1614 Conyza_canadensis_scaffold:2 + View
Eucalyptus grandis Eucgr.I02201 Chr09 + View
Eucalyptus grandis Eucgr.F03603 Chr06 - View
Eucalyptus grandis Eucgr.F01820 Chr06 + View
Erythranthe guttata Migut.N02989 scaffold_14 - View
Eutrema salsugineum Thhalv10018983m.g KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) scaffold_9 + View
Fragaria x ananassa FAN18G2507 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Fvb5-1 + View
Fragaria x ananassa FAN08G0068 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Fvb5-3 - View
Fragaria x ananassa FAN04G1603 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Fvb5-4 + View
Fragaria x ananassa FAN13G1717 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Fvb5-2 + View
Fragaria vesca FvH4_5g26080 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Fvb5 + View
Gossypium hirsutum Gohir.D02G103600 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) D02 - View
Gossypium hirsutum Gohir.A01G101800 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) A01 + View
Gossypium hirsutum Gohir.D01G086900 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) D01 + View
Glycine max Glyma.06G014300 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Gm06 + View
Glycine max Glyma.04G014300 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Gm04 + View
Gossypium raimondii Gorai.002G112500 Chr02 + View
Gossypium raimondii Gorai.005G117700 Chr05 - View
Lupinus albus Lalb_Chr23g0265501 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Lalb_Chr23 + View
Lotus japonicus Lj1g0016936 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) chr1 + View
Lactuca sativa Lsat_1_v5_gn_9_48300 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Lsat_1_v8_lg_9 + View
Magnolia biondii MBI04_g31210_MAGBIO AED:0.09 Chr04 - View
Magnolia biondii MBI01_g28406_MAGBIO AED:0.11 Chr01 + View
Malus domestica MD06G1004000 RNA-binding (RRM/RBD/RNP motifs) family protein Chr06 + View
Malus domestica MD15G1228000 RNA-binding (RRM/RBD/RNP motifs) family protein Chr15 + View
Malus domestica MD02G1108800 RNA-binding (RRM/RBD/RNP motifs) family protein Chr02 + View
Manihot esculenta Manes.18G001800 Chromosome18 + View
Manihot esculenta Manes.05G127900 Chromosome05 + View
Manihot esculenta Manes.02G116700 Chromosome02 - View
Medicago truncatula Medtr3g116130 RNA-binding (RRM/RBD/RNP motif) family protein chr3 - View
Nelumbo nucifera Nn6g31618 chr6 + View
Nelumbo nucifera Nn5g31051 chr5 - View
Olea europaea Oeu030360.2 chr4 - View
Olea europaea Oeu042506.1 scaffold402 + View
Petunia axillaris Peaxi162Scf00385g00018 RNA-binding protein 38 Peaxi162Scf00385 - View
Punica granatum PGR031G0467 NC_045127.1 - View
Punica granatum PGR083G0393 NC_045133.1 - View
Prunus persica Prupe.7G186900 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Pp07 - View
Prunus persica Prupe.5G005300 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Pp05 + View
Papaver somniferum PSO675G8806 NC_039358.1 - View
Papaver somniferum PSO170G5065 NC_039360.1 + View
Papaver somniferum PSO541G2048 NC_039363.1 - View
Papaver somniferum PSO017G1691 NC_039362.1 + View
Populus trichocarpa Potri.002G004600 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Chr02 + View
Populus trichocarpa Potri.005G256700 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Chr05 - View
Quercus lobata QL02p015755 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr7g0216701 RcHm_v2.0_Chr7 - View
Rosa chinensis RcHm_v2.0_Chr2g0096781 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim06G0003000 chr06 + View
Striga asiatica SGA_v2.0_scaffold227G43163 scaffold227 - View
Striga asiatica SGA_v2.0_scaffold220G42643 scaffold220 + View
Salix brachista Sabra05G0198800 GWHAAZH00000005 - View
Salix brachista Sabra02G0003100 GWHAAZH00000002 + View
Simmondsia chinensis Sc26g0004760 GWHAASQ00000026 - View
Sechium edule Sed0009990 LG08 - View
Solanum lycopersicum Solyc04g082770.4 RNA-binding protein 38-like (AHRD V3.3 *** A0A2I4G7F9_9ROSI) SL4.0ch04 - View
Solanum lycopersicum Solyc02g082270.3 RNA-binding protein 38-like (AHRD V3.3 *** A0A2I4G7F9_9ROSI) SL4.0ch02 + View
Schrenkiella parvula Sp5g31630 KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) ch5-7 - View
Solanum pennellii Sopen02g026930 RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein Spenn-ch02 + View
Solanum pennellii Sopen04g036410 RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400009999 RNA recognition motif-containing protein ST4.03ch04 - View
Solanum tuberosum PGSC0003DMG401013639 RNA recognition motif-containing protein ST4.03ch02 + View
Trochodendron aralioides TAR381G0051 group11 + View
Trochodendron aralioides TAR376G0834 group14 - View
Trochodendron aralioides TAR628G0170 group5 - View
Theobroma cacao Thecc.08G099600 RNA-binding family protein Chromosome_8 + View
Tarenaya hassleriana THA.LOC104813737 RNA-binding protein 38-like isoform X1 NW_010965373.1 + View
Tarenaya hassleriana THA.LOC104812008 probable RNA-binding protein ARP1 NW_010965372.1 - View
Tripterygium wilfordii TWI56G0525 NC_052242.1 - View
Tripterygium wilfordii TWI12G0980 NC_052243.1 + View
Vaccinium macrocarpon vmacro21765 Similar to ARP1: Probable RNA-binding protein ARP1 (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro20607 Similar to ARP1: Probable RNA-binding protein ARP1 (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1309G1435 CM024072.1 - View
Vitis vinifera GSVIVG01013430001 chr18 + View
Zea mays Zm00001eb388030 Zm00001e037573 RNA-binding (RRM/RBD/RNP motifs) family protein 9 + View