Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr3.3992 chr3 - View
Actinidia chinensis Actinidia34426 Lachesis_group15 + View
Actinidia chinensis Actinidia23918 Lachesis_group9 - View
Actinidia chinensis Actinidia33769 Lachesis_group20 - View
Arabidopsis lyrata AL1G17620 scaffold_1 + View
Amaranthus hybridus Ah.15g098630 Transcription initiation factor IIA large subunit (TFIIA large subunit) AmaHy_arrow1_Scaffold_15 - View
Amaranthus hybridus Ah.08g220030 AmaHy_arrow1_Scaffold_8 - View
Aquilegia oxysepala Aqoxy1G00871 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YALI07 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) arahy.Tifrunner.gnm1.Arahy.08 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WL6KIL K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) arahy.Tifrunner.gnm1.Arahy.18 + View
Arabidopsis thaliana AT1G07470 Transcription factor IIA, alpha/beta subunit Transcription factor IIA%2C alpha/beta subunit%3B FUNCTIONS IN: RNA polymerase II transcription factor activity%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: transcription initiation from RNA polymerase II promoter%2C transcription%3B LOCATED IN: transcription factor TFIIA complex%3B EXPRESSED IN: male gametophyte%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: Transcription factor IIA%2C alpha/beta subunit (InterPro:IPR004855)%2C Transcription factor IIA%2C beta-barrel (InterPro:IPR009088)%2C Transcription factor IIA%2C alpha subunit%2C N-terminal (InterPro:IPR013028)%2C Transcription factor IIA%2C helical (InterPro:IPR009083)%3B BEST Arabidopsis thaliana protein match is: Transcription factor IIA%2C alpha/beta subunit (TAIR:AT1G07480.2)%3B Has 705 Blast hits to 589 proteins in 189 species: Archae - 0%3B Bacteria - 16%3B Metazoa - 386%3B Fungi - 167%3B Plants - 79%3B Viruses - 7%3B Other Eukaryotes - 50 (source: NCBI BLink). Chr1 + View
Beta vulgaris EL10Ac7g16069 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) Chr7_EL10_PGA_scaffold5 - View
Capsicum annuum CAN.G394.76 PGAv.1.6.scaffold394 - View
Cannabis sativa CANSAT54G1307 NC_044375.1 + View
Cicer arietinum L. Ca_01303_v3 Ca_LG1_v3 + View
Corylus avellana Haze_24169 Protein of unknown function 6 - View
Coffea canephora Cc01_g13340 Putative Transcription initiation factor IIA large subunit chr1 - View
Citrus clementina Ciclev10028561m.g scaffold_8 - View
Cardamine hirsuta CARHR007220 Transcription factor IIA large subunit Chr1 + View
Carya illinoinensis CiPaw.13G089300 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) Chr13 + View
Carya illinoinensis CiPaw.14G065100 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) Chr14 + View
Citrullus lanatus ClCG02G019890 Transcription initiation factor IIA subunit 1 CG_Chr02 + View
Cucumis melo MELO3C025890.2 transcription initiation factor IIA subunit 1 chr11 - View
Carica papaya Cpa.g.sc81.98 supercontig_81 + View
Chenopodium quinoa AUR62001737 toa1: Transcription initiation factor IIA large subunit C_Quinoa_Scaffold_2716 + View
Chenopodium quinoa AUR62020038 At5g59250: D-xylose-proton symporter-like 3, chloroplastic C_Quinoa_Scaffold_2465 - View
Capsella rubella Carub.0001s0677 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) scaffold_1 + View
Cucumis sativus L. CsaV3_7G010010 transcription initiation factor IIA subunit 1 chr7 - View
Cucumis sativus L. CsaV3_6G016600 transcription initiation factor IIA subunit 1 chr6 + View
Daucus carota DCAR_018926 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv17046 GWHABJS00000530 - View
Davidia involucrata Dinv34286 GWHABJS00000007 - View
Davidia involucrata Dinv42990 GWHABJS00000085 - View
Davidia involucrata Dinv43108 GWHABJS00000085 + View
Durio zibethinus Duzib150G1564 NW_019167882.1 - View
Durio zibethinus Duzib168G2307 NW_019168159.1 + View
Erigeron canadensis ECA247G2536 Conyza_canadensis_scaffold:7 + View
Erigeron canadensis ECA248G3960 Conyza_canadensis_scaffold:9 - View
Erythranthe guttata Migut.D00878 scaffold_4 + View
Fragaria x ananassa FAN16G2405 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) Fvb3-3 - View
Fragaria x ananassa FAN11G1275 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) Fvb3-4 + View
Fragaria x ananassa FAN25G2385 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) Fvb3-1 + View
Fragaria x ananassa FAN21G3821 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) Fvb3-2 - View
Fragaria vesca FvH4_3g36940 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) Fvb3 - View
Gossypium hirsutum Gohir.A07G100400 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) A07 - View
Gossypium hirsutum Gohir.D07G104600 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) D07 - View
Gossypium hirsutum Gohir.A05G093100 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) A05 + View
Glycine max Glyma.12G059800 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) Gm12 + View
Glycine max Glyma.11G136100 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) Gm11 + View
Glycine max Glyma.13G339000 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) Gm13 - View
Glycine max Glyma.15G035300 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) Gm15 + View
Gossypium raimondii Gorai.009G096500 Chr09 + View
Gossypium raimondii Gorai.001G112500 Chr01 - View
Hydrangea macrophylla Hma1.2p1_0615F.1_g189680 Hma1.2p1_0615F.1 + View
Lupinus albus Lalb_Chr03g0026451 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) Lalb_Chr03 + View
Lupinus albus Lalb_Chr01g0003481 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) Lalb_Chr01 + View
Lupinus albus Lalb_Chr19g0137971 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) Lalb_Chr19 - View
Lotus japonicus Lj3g0024298 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) chr3 + View
Lotus japonicus Lj3g0009557 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) chr3 + View
Lonicera japonica Lj1A146G69 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_9_24801 Lsat_1_v8_lg_9 - View
Lactuca sativa Lsat_1_v5_gn_8_72760 Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_5_169601 PTHR12694 - TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1 Lsat_1_v8_lg_5 + View
Magnolia biondii MBI14_g11605_MAGBIO AED:0.10 Chr14 - View
Malus domestica MD11G1094800 Transcription factor IIA Chr11 + View
Malus domestica MD03G1086200 Transcription factor IIA Chr03 + View
Manihot esculenta Manes.01G169400 Chromosome01 + View
Manihot esculenta Manes.02G128700 Chromosome02 + View
Medicago truncatula Medtr2g097740 transcription factor IIA, alpha/beta subunit chr2 - View
Nelumbo nucifera Nn2g11208 chr2 - View
Nelumbo nucifera Nn2g13454 chr2 - View
Olea europaea Oeu007659.1 scaffold1280 - View
Petunia axillaris Peaxi162Scf00481g00323 Transcription factor IIA, alpha/beta subunit Peaxi162Scf00481 - View
Punica granatum PGR102G0701 NC_045129.1 - View
Prunus persica Prupe.6G070500 Pp06 + View
Papaver somniferum PSO339G5513 NC_039366.1 - View
Papaver somniferum PSO063G1745 NC_039364.1 - View
Populus trichocarpa Potri.009G036700 KOG2652 - RNA polymerase II transcription initiation factor TFIIA, large chain Chr09 - View
Populus trichocarpa Potri.001G244204 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) Chr01 - View
Phaseolus vulgaris Phvul.L008243 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) scaffold_15 - View
Quercus lobata QL01p029248 1 + View
Rosa chinensis RcHm_v2.0_Chr5g0066351 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim13G0077100 chr13 + View
Rhododendron simsii Rhsim01G0231600 chr01 - View
Salvia bowleyana SalBow2G2908 GWHASIU00000007 + View
Salix brachista Sabra16G0148300 GWHAAZH00000016 - View
Simmondsia chinensis Sc21g0006020 GWHAASQ00000021 + View
Sechium edule Sed0005276 LG01 - View
Sechium edule Sed0005039 LG05 - View
Sapria himalayana SHI05909 scaffold2_22354274 + View
Solanum lycopersicum Solyc06g076390.3 Transcription initiation factor IIA subunit 1 (AHRD V3.3 *** A0A2G3CBK7_CAPCH) SL4.0ch06 - View
Schrenkiella parvula Sp1g06200 K03122 - transcription initiation factor TFIIA large subunit (TFIIA1, GTF2A1, TOA1) ch1-1 + View
Solanum pennellii Sopen06g032800 Transcription factor IIA, alpha/beta subunit | FUNCTIONS IN: RNA polymerase II transcription factor activity, sequence-specific DNA binding transcription factor activity | INVOLVED IN: transcription initiation from RNA polymerase II promoter, transcription | LOCATED IN: transcription factor TFIIA complex | EXPRESSED IN: male gametophyte, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Transcription factor IIA, alpha/beta subunit , Transcription factor IIA, beta-barrel , Transcription factor IIA, alpha subunit, N-terminal , Transcription factor IIA, helical | BEST Arabidopsis thaliana protein match is: Transcription factor IIA, alpha/beta subunit Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400030421 TFIIA ST4.03ch06 - View
Selenicereus undatus Hund18888 Scaffold_33675 + View
Selenicereus undatus Hund04922 Scaffold_19641 + View
Trochodendron aralioides TAR369G0400 group18 + View
Trochodendron aralioides TAR623G0488 group7 - View
Theobroma cacao Thecc.09G315600 Transcription initiation factor IIA subunit 1 Chromosome_9 + View
Tarenaya hassleriana THA.LOC104815781 transcription initiation factor IIA large subunit-like NW_010965696.1 + View
Tarenaya hassleriana THA.LOC104810753 transcription initiation factor IIA large subunit-like NW_010965304.1 + View
Tarenaya hassleriana THA.LOC104799429 transcription initiation factor IIA large subunit-like NW_010968505.1 + View
Tarenaya hassleriana THA.LOC104800687 transcription initiation factor IIA subunit 1-like NW_010969548.1 - View
Trifolium pratense TPR.G6857 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI75G0827 NC_052253.1 + View
Vaccinium macrocarpon vmacro14557 Protein of unknown function chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro03029 Protein of unknown function chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1080G0815 CM024079.1 + View
Vitis vinifera GSVIVG01024907001 chr6 - View