Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0016881 PREDICTED: putative pentatricopeptide repeat-containing protein At3g11460 [Vitis vinifera] Chr10 + View
CSS0036596 PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Vitis vinifera] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr13.2447 chr13 - View
Actinidia chinensis Actinidia09281 Lachesis_group5 - View
Aquilegia oxysepala Aqoxy2G00388 CHR02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.397YA3 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT2G40720 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21300.1)%3B Has 52244 Blast hits to 13768 proteins in 266 species: Archae - 0%3B Bacteria - 9%3B Metazoa - 106%3B Fungi - 105%3B Plants - 51420%3B Viruses - 0%3B Other Eukaryotes - 604 (source: NCBI BLink). Chr2 + View
Brassica napus A06p40420 A06 + View
Cannabis sativa CANSAT80G2247 NC_044372.1 - View
Cicer arietinum L. Ca_06770_v3 Ca_LG3_v3 - View
Cicer arietinum L. Ca_07221_v3 Ca_LG3_v3 - View
Cardamine hirsuta CARHR135810 Pentatricopeptide repeat-containing protein, putative Chr4 + View
Carya illinoinensis CiPaw.09G045600 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Chr09 - View
Citrullus lanatus ClCG10G016060 Pentatricopeptide repeat-containing protein CG_Chr10 + View
Cucumis melo MELO3C009774.2 Pentatricopeptide repeat-containing family protein chr04 + View
Cucumis melo MELO3C019139.2 Nascent polypeptide-associated complex subunit alpha-like protein chr08 + View
Chenopodium quinoa AUR62019713 PCMP-E63: Pentatricopeptide repeat-containing protein At1g53600, mitochondrial C_Quinoa_Scaffold_2127 + View
Capsella rubella Carub.0004s2300 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_4 + View
Cucumis sativus L. CsaV3_3G040390 Pentatricopeptide repeat-containing protein chr3 - View
Cucumis sativus L. CsaV3_4G029880 Pentatricopeptide repeat-containing protein chr4 - View
Erigeron canadensis ECA248G1043 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA238G1706 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA238G4394 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA248G2899 Conyza_canadensis_scaffold:9 - View
Eucalyptus grandis Eucgr.K01631 Chr11 + View
Erythranthe guttata Migut.J01659 scaffold_10 - View
Eutrema salsugineum Thhalv10017587m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_10 + View
Fragaria x ananassa FAN02G3481 PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) Fvb6-4 + View
Gossypium hirsutum Gohir.D10G110100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D10 + View
Lotus japonicus Lj2g0006386 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) chr2 - View
Lonicera japonica Lj6P561T29 GWHAAZE00000006 - View
Lonicera japonica Lj1C1096G11 GWHAAZE00000001 - View
Magnolia biondii MBI13_g05978_MAGBIO AED:0.26 Chr13 - View
Malus domestica MD12G1089800 Tetratricopeptide repeat (TPR)-like superfamily protein Chr12 + View
Olea europaea Oeu033765.1 chr17 - View
Punica granatum PGR142G3401 NC_045128.1 - View
Prunus persica Prupe.7G042800 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp07 + View
Papaver somniferum PSO478G4588 NC_039361.1 - View
Papaver somniferum PSO339G1953 NC_039366.1 + View
Populus trichocarpa Potri.016G038400 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Chr16 + View
Quercus lobata QL07p008722 7 - View
Rhododendron simsii Rhsim04G0109900 chr04 + View
Striga asiatica SGA_v2.0_scaffold106G30547 scaffold106 + View
Striga asiatica SGA_v2.0_scaffold105G30295 scaffold105 - View
Salvia bowleyana SalBow6G1391 GWHASIU00000002 - View
Salix brachista Sabra02G0141700 GWHAAZH00000002 - View
Salix brachista Sabra16G0044900 GWHAAZH00000016 + View
Simmondsia chinensis Sc19g0008180 GWHAASQ00000019 - View
Simmondsia chinensis Sc10g0004280 GWHAASQ00000010 + View
Sechium edule Sed0013616 LG12 + View
Schrenkiella parvula Sp4g23030 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch4-6 + View
Solanum pennellii Sopen06g008540 Tetratricopeptide repeat (TPR)-like superfamily protein | INVOLVED IN: biological_process unknown | LOCATED IN: endomembrane system | EXPRESSED IN: leaf whorl, flower, seed | EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch06 + View
Solanum pennellii Sopen11g017250 embryo defective 2758 (EMB2758) | INVOLVED IN: embryo development ending in seed dormancy | LOCATED IN: mitochondrion | EXPRESSED IN: shoot apex, embryo | EXPRESSED DURING: D bilateral stage | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch11 - View
Solanum pennellii Sopen04g010110 Pentatricopeptide repeat (PPR) superfamily protein | FUNCTIONS IN: binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 13 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat , Tetratricopeptide-like helical | BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein Spenn-ch04 - View
Solanum pennellii Sopen10g024640 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 22 Spenn-ch10 - View
Tripterygium wilfordii TWI53G0497 NC_052244.1 + View
Tripterygium wilfordii TWI74G0951 NC_052234.1 + View
Vitis vinifera GSVIVG01033603001 chr8 - View