Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Aethionema arabicum | Aa31LG4G13190 | LG-4 | - | View | |
| Aethionema arabicum | Aa31LG7G3890 | LG-7 | + | View | |
| Acer truncatum | Atru.chr7.1737 | chr7 | + | View | |
| Actinidia chinensis | Actinidia30241 | Lachesis_group18 | + | View | |
| Actinidia chinensis | Actinidia39638 | Lachesis_group5 | + | View | |
| Arabidopsis lyrata | AL1G31750 | scaffold_1 | + | View | |
| Avicennia marina | MSTRG.10499 | ScioBoG_13798_HRSCAF_13862 | - | View | |
| Avicennia marina | MSTRG.19446 | ScioBoG_25048_HRSCAF_25167 | - | View | |
| Amaranthus hybridus | Ah.09g229080 | AmaHy_arrow1_Scaffold_9 | + | View | |
| Aquilegia oxysepala | Aqoxy7G01012 | CHR07 | - | View | |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.22Q2RH | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | arahy.Tifrunner.gnm1.Arahy.13 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.NX52FE | PTHR31339:SF0 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN | arahy.Tifrunner.gnm1.Arahy.01 | - | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.N1SUXZ | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | arahy.Tifrunner.gnm1.Arahy.14 | - | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.FH7GLE | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | arahy.Tifrunner.gnm1.Arahy.03 | + | View |
| Arabidopsis thaliana | AT3G42950 | Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Pectin lyase fold (InterPro:IPR012334)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G19170.1)%3B Has 4385 Blast hits to 4369 proteins in 520 species: Archae - 6%3B Bacteria - 1604%3B Metazoa - 14%3B Fungi - 1181%3B Plants - 1422%3B Viruses - 0%3B Other Eukaryotes - 158 (source: NCBI BLink). | Chr3 | + | View |
| Arabidopsis thaliana | AT1G19170 | Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Parallel beta-helix repeat (InterPro:IPR006626)%2C Pectin lyase fold (InterPro:IPR012334)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G42950.1)%3B Has 4384 Blast hits to 4371 proteins in 509 species: Archae - 6%3B Bacteria - 1552%3B Metazoa - 14%3B Fungi - 1224%3B Plants - 1428%3B Viruses - 0%3B Other Eukaryotes - 160 (source: NCBI BLink). | Chr1 | + | View |
| Amborella trichopoda | ATR0006G054 | AmTr_v1.0_scaffold00131 | + | View | |
| Brassica carinata | BcaC07g38984 | ChrC07 | + | View | |
| Brassica napus | C08p19250 | C08 | + | View | |
| Beta vulgaris | EL10Ac8g19005 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | Chr8_EL10_PGA_scaffold4 | - | View |
| Capsicum annuum | CAN.G1661.24 | PGAv.1.6.scaffold1661 | + | View | |
| Cannabis sativa | CANSAT56G0733 | NC_044371.1 | + | View | |
| Cicer arietinum L. | Ca_09312_v3 | Ca_LG3_v3 | + | View | |
| Cicer arietinum L. | Ca_02218_v3 | Ca_LG1_v3 | + | View | |
| Corylus avellana | Haze_26035 | Similar to GSVIVT00026920001: Probable polygalacturonase (Vitis vinifera OX%3D29760) | 8 | + | View |
| Coffea canephora | Cc06_g12490 | Putative Probable polygalacturonase | chr6 | + | View |
| Citrus clementina | Ciclev10008093m.g | scaffold_1 | + | View | |
| Ceratophyllum demersum | CDE05G0162 | 3 | - | View | |
| Carpinus fangiana | Cfa002964 | Cfa01 | - | View | |
| Cardamine hirsuta | CARHR019770 | Pectin lyase-like protein | Chr1 | + | View |
| Carya illinoinensis | CiPaw.03G203500 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | Chr03 | - | View |
| Carya illinoinensis | CiPaw.04G141500 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | Chr04 | - | View |
| Citrullus lanatus | ClCG03G014900 | Pectin lyase-like superfamily protein LENGTH=484 | CG_Chr03 | - | View |
| Cucumis melo | MELO3C015537.2 | Glycoside hydrolase family 28 family protein | chr02 | + | View |
| Corchorus olitorius | COL.COLO4_18066 | Glycoside hydrolase%2C family 28 | AWUE01016420.1 | - | View |
| Carica papaya | Cpa.g.sc28.9 | supercontig_28 | - | View | |
| Chenopodium quinoa | AUR62025293 | GSVIVT00026920001: Probable polygalacturonase | C_Quinoa_Scaffold_4329 | - | View |
| Chenopodium quinoa | AUR62028299 | GSVIVT00026920001: Probable polygalacturonase | C_Quinoa_Scaffold_1426 | - | View |
| Capsella rubella | Carub.0001s1879 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | scaffold_1 | + | View |
| Cucumis sativus L. | CsaV3_1G041240 | Pectin lyase-like superfamily protein | chr1 | + | View |
| Daucus carota | DCAR_024767 | hypothetical protein | DCARv2_Chr7 | + | View |
| Daucus carota | DCAR_011936 | hypothetical protein | DCARv2_Chr3 | - | View |
| Davidia involucrata | Dinv42415 | GWHABJS00000013 | + | View | |
| Davidia involucrata | Dinv25536 | GWHABJS00000001 | + | View | |
| Durio zibethinus | Duzib168G1509 | NW_019168159.1 | - | View | |
| Durio zibethinus | Duzib187G0865 | NW_019167860.1 | + | View | |
| Durio zibethinus | Duzib150G0285 | NW_019167882.1 | - | View | |
| Erigeron canadensis | ECA236G4576 | Conyza_canadensis_scaffold:3 | - | View | |
| Eucalyptus grandis | Eucgr.C00786 | Chr03 | - | View | |
| Erythranthe guttata | Migut.L01581 | scaffold_12 | + | View | |
| Erythranthe guttata | Migut.J00906 | scaffold_10 | - | View | |
| Eutrema salsugineum | Thhalv10007407m.g | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | scaffold_5 | - | View |
| Fragaria x ananassa | FAN26G2982 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | Fvb1-2 | + | View |
| Fragaria x ananassa | FAN26G0015 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | Fvb1-2 | - | View |
| Fragaria x ananassa | FAN23G2424 | PF12708//PF13229 - Pectate lyase superfamily protein (Pectate_lyase_3) // Right handed beta helix region (Beta_helix) | Fvb1-3 | + | View |
| Fragaria x ananassa | FAN19G2803 | PF00295//PF12708 - Glycosyl hydrolases family 28 (Glyco_hydro_28) // Pectate lyase superfamily protein (Pectate_lyase_3) | Fvb1-4 | + | View |
| Fragaria x ananassa | FAN28G2211 | PF12708//PF13229 - Pectate lyase superfamily protein (Pectate_lyase_3) // Right handed beta helix region (Beta_helix) | Fvb1-1 | - | View |
| Fragaria vesca | FvH4_1g09050 | PF12708//PF13229 - Pectate lyase superfamily protein (Pectate_lyase_3) // Right handed beta helix region (Beta_helix) | Fvb1 | + | View |
| Gossypium hirsutum | Gohir.A05G034700 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | A05 | + | View |
| Gossypium hirsutum | Gohir.A06G078300 | PF13229 - Right handed beta helix region (Beta_helix) | A06 | + | View |
| Gossypium hirsutum | Gohir.D07G015600 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | D07 | + | View |
| Gossypium hirsutum | Gohir.D05G036100 | PF13229 - Right handed beta helix region (Beta_helix) | D05 | + | View |
| Gossypium hirsutum | Gohir.A07G015900 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | A07 | + | View |
| Gossypium hirsutum | Gohir.D06G077400 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | D06 | + | View |
| Glycine max | Glyma.17G047800 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | Gm17 | - | View |
| Glycine max | Glyma.15G179500 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | Gm15 | + | View |
| Glycine max | Glyma.09G071500 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | Gm09 | + | View |
| Glycine max | Glyma.13G111900 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | Gm13 | + | View |
| Gossypium raimondii | Gorai.001G016500 | Chr01 | + | View | |
| Gossypium raimondii | Gorai.010G090400 | Chr10 | + | View | |
| Gossypium raimondii | Gorai.009G036700 | Chr09 | + | View | |
| Helianthus annuus | HanXRQChr04g0125911 | Probable pectin lyase-like superfamily protein | HanXRQChr04 | - | View |
| Lupinus albus | Lalb_Chr13g0299351 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | Lalb_Chr13 | - | View |
| Lupinus albus | Lalb_Chr11g0074151 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | Lalb_Chr11 | - | View |
| Lupinus albus | Lalb_Chr12g0200261 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | Lalb_Chr12 | + | View |
| Lotus japonicus | Lj4g0028097 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | chr4 | - | View |
| Lotus japonicus | Lj6g0010923 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | chr6 | - | View |
| Lonicera japonica | Lj4A915T64 | GWHAAZE00000004 | + | View | |
| Lonicera japonica | Lj7A689T74 | GWHAAZE00000007 | + | View | |
| Lactuca sativa | Lsat_1_v5_gn_5_139581 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | Lsat_1_v8_lg_5 | - | View |
| Lactuca sativa | Lsat_1_v5_gn_8_85760 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | Lsat_1_v8_lg_8 | - | View |
| Magnolia biondii | MBI13_g00693_MAGBIO | AED:0.08 | Chr13 | + | View |
| Magnolia biondii | MBI19_g05285_MAGBIO | AED:0.11 | Chr19 | + | View |
| Malus domestica | MD02G1096000 | Pectin lyase-like superfamily protein | Chr02 | + | View |
| Malus domestica | MD15G1220300 | Pectin lyase-like superfamily protein | Chr15 | + | View |
| Manihot esculenta | Manes.03G042400 | Chromosome03 | + | View | |
| Manihot esculenta | Manes.16G093600 | Chromosome16 | - | View | |
| Medicago truncatula | Medtr2g042740 | pectin lyase superfamily protein | chr2 | + | View |
| Medicago truncatula | Medtr4g124980 | pectin lyase superfamily protein | chr4 | - | View |
| Nelumbo nucifera | Nn8g38584 | chr8 | - | View | |
| Nicotiana tabacum | Nitab4.5_0004234g0090 | Glycoside hydrolase, family 28, Parallel beta-helix repeat, Pectin lyase fold, Pectin lyase fold/virulence factor | Nitab4.5_0004234 | + | View |
| Nicotiana tabacum | Nitab4.5_0000343g0330 | Pectin lyase fold/virulence factor, Pectin lyase fold, Glycoside hydrolase, family 28, Parallel beta-helix repeat | Nitab4.5_0000343 | + | View |
| Nicotiana tabacum | Nitab4.5_0000073g0280 | Pectin lyase fold, Glycoside hydrolase, family 28, Pectin lyase fold/virulence factor, Parallel beta-helix repeat | Nitab4.5_0000073 | + | View |
| Olea europaea | Oeu060637.1 | chr14 | - | View | |
| Olea europaea | Oeu005160.3 | chr2 | - | View | |
| Oryza sativa ssp. japonica | Os09g0439400 | Pectin lyase fold/virulence factor domain containing protein. | chr09 | + | View |
| Petunia axillaris | Peaxi162Scf00928g00129 | Pectin lyase-like superfamily protein | Peaxi162Scf00928 | + | View |
| Petunia axillaris | Peaxi162Scf00191g01426 | Pectin lyase-like superfamily protein | Peaxi162Scf00191 | - | View |
| Punica granatum | PGR142G0639 | NC_045128.1 | + | View | |
| Prunus persica | Prupe.7G195000 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | Pp07 | - | View |
| Pisum sativum | Psat4g018800 | Glycosyl hydrolases family 28 | chr4LG4 | + | View |
| Papaver somniferum | PSO386G0101 | NW_020624376.1 | - | View | |
| Papaver somniferum | PSO724G1334 | NW_020618825.1 | + | View | |
| Papaver somniferum | PSO421G0440 | NW_020619603.1 | - | View | |
| Populus trichocarpa | Potri.006G139500 | PTHR31339:SF0 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN | Chr06 | - | View |
| Populus trichocarpa | Potri.018G062700 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | Chr18 | + | View |
| Phaseolus vulgaris | Phvul.009G225400 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | Chr09 | - | View |
| Phaseolus vulgaris | Phvul.003G129300 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | Chr03 | - | View |
| Quercus lobata | QL11p001254 | 11 | + | View | |
| Rosa chinensis | RcHm_v2.0_Chr2g0095471 | RcHm_v2.0_Chr2 | + | View | |
| Rhododendron simsii | Rhsim05G0004800 | chr05 | - | View | |
| Striga asiatica | SGA_v2.0_scaffold31G12668 | scaffold31 | + | View | |
| Striga asiatica | SGA_v2.0_scaffold296G47556 | scaffold296 | + | View | |
| Salvia bowleyana | SalBow5G5145 | GWHASIU00000003 | - | View | |
| Salvia bowleyana | SalBow6G3693 | GWHASIU00000002 | - | View | |
| Simmondsia chinensis | Sc08g0009070 | GWHAASQ00000008 | - | View | |
| Sechium edule | Sed0010452 | LG12 | - | View | |
| Sechium edule | Sed0006361 | LG08 | + | View | |
| Solanum lycopersicum | Solyc12g009210.2 | Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1NPR9_ARTAN) | SL4.0ch12 | + | View |
| Solanum lycopersicum | Solyc07g042160.3 | Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1LH94_ARTAN) | SL4.0ch07 | + | View |
| Schrenkiella parvula | Sp1g17070 | PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) | ch1-1 | + | View |
| Solanum pennellii | Sopen12g004160 | Pectin lyase-like superfamily protein | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: mitochondrion | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Parallel beta-helix repeat , Pectin lyase fold , Glycoside hydrolase, family 28 | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein | Spenn-ch12 | + | View |
| Solanum pennellii | Sopen07g021760 | Pectin lyase-like superfamily protein | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: endomembrane system | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Glycoside hydrolase, family 28 , Pectin lyase fold , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein | Spenn-ch07 | + | View |
| Solanum tuberosum | PGSC0003DMG400016038 | Polygalacturonase | ST4.03ch07 | + | View |
| Solanum tuberosum | PGSC0003DMG400002931 | Polygalacturonase | ST4.03ch12 | - | View |
| Trochodendron aralioides | TAR468G0006 | contig1279 | - | View | |
| Trochodendron aralioides | TAR624G1060 | group9 | - | View | |
| Theobroma cacao | Thecc.09G073700 | Pectin lyase-like superfamily protein | Chromosome_9 | - | View |
| Tarenaya hassleriana | THA.LOC104810991 | probable polygalacturonase | NW_010965304.1 | - | View |
| Trifolium pratense | TPR.G12713 | Tp57577_TGAC_v2_LG2 | - | View | |
| Tripterygium wilfordii | TWI63G1669 | NC_052240.1 | + | View | |
| Utricularia gibba | unitig_699.g19257 | unitig_699 | + | View | |
| Vaccinium macrocarpon | vmacro17116 | Similar to GSVIVT00026920001: Probable polygalacturonase (Vitis vinifera OX%3D29760) | chr3_Vaccinium_macrocarpon_Stevens_v1 | + | View |
| Vigna mungo | VMungo1215G2577 | CM024074.1 | + | View | |
| Vigna mungo | VMungo1309G0910 | CM024072.1 | + | View | |
| Vitis vinifera | GSVIVG01015044001 | chr11 | - | View |