Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0039771 hypothetical protein PRUPE_ppa012932mg [Prunus persica] Chr11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G7480 LG-5 - View
Aethionema arabicum Aa31LG1G22240 LG-1 + View
Aethionema arabicum Aa31LG4G15090 LG-4 - View
Aethionema arabicum Aa31LG5G22910 LG-5 + View
Acer truncatum Atru.chr3.3829 chr3 + View
Actinidia chinensis Actinidia33855 Lachesis_group15 - View
Actinidia chinensis Actinidia23958 Lachesis_group9 + View
Actinidia chinensis Actinidia05295 Lachesis_group20 + View
Arabidopsis lyrata AL4G23250 scaffold_4 + View
Arabidopsis lyrata AL6G11840 scaffold_6 - View
Arabidopsis lyrata AL5G24690 scaffold_5 - View
Arabidopsis lyrata AL8G36480 scaffold_8 + View
Amaranthus hybridus Ah.08g219050 AmaHy_arrow1_Scaffold_8 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.E23R5P PF00125//PF01494 - Core histone H2A/H2B/H3/H4 (Histone) // FAD binding domain (FAD_binding_3) arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.2MB6KR K11252 - histone H2B (H2B) arahy.Tifrunner.gnm1.Arahy.03 + View
Arabidopsis thaliana AT2G28720 Histone superfamily protein Histone superfamily protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleus%2C nucleosome%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1)%3B Has 3535 Blast hits to 3431 proteins in 349 species: Archae - 0%3B Bacteria - 57%3B Metazoa - 2253%3B Fungi - 226%3B Plants - 491%3B Viruses - 2%3B Other Eukaryotes - 506 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT5G59910 Histone superfamily protein HTB4%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleolus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT5G02570 Histone superfamily protein Histone superfamily protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleolus%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G37470.1)%3B Has 3216 Blast hits to 3216 proteins in 325 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2228%3B Fungi - 200%3B Plants - 462%3B Viruses - 0%3B Other Eukaryotes - 326 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT3G45980 Histone superfamily protein Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta%2C and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases as well as the UBC1 and UBC2 E2 ubiquitin conjugating enzymes. Lysine 146 appears to be the site of the ubiquitin addition. HTB9%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleolus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT1G07790.1)%3B Has 3616 Blast hits to 3469 proteins in 351 species: Archae - 0%3B Bacteria - 64%3B Metazoa - 2275%3B Fungi - 213%3B Plants - 487%3B Viruses - 0%3B Other Eukaryotes - 577 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaB06g28245 ChrB06 + View
Brassica carinata BcaC01g01942 ChrC01 + View
Brassica carinata BcaC01g06534 ChrC01 - View
Brassica carinata BcaC02g11000 ChrC02 + View
Brassica carinata BcaC04g19650 ChrC04 + View
Brassica carinata BcaB05g22599 ChrB05 + View
Brassica carinata BcaC02g08143 ChrC02 - View
Brassica carinata BcaB08g36210 ChrB08 - View
Brassica napus C09p52440 C09 + View
Brassica napus C02p12010 C02 - View
Brassica napus A10p17140 A10 + View
Brassica napus C03p70330 C03 + View
Brassica napus A03p11400 A03 - View
Brassica napus A06p21160 A06 + View
Brassica napus C03p13160 C03 - View
Brassica napus C04p57900 C04 + View
Brassica napus A04p21790 A04 + View
Brassica napus A02p06710 A02 - View
Brassica oleracea BolC9t58112H C9 + View
Brassica oleracea BolC2t07300H C2 - View
Brassica oleracea BolC4t23747H C4 - View
Brassica oleracea BolC3t19293H C3 - View
Brassica oleracea BolC4t27315H C4 + View
Brassica rapa BraA04t17745Z A04 + View
Brassica rapa BraA10t43796Z A10 + View
Brassica rapa BraA06t25202Z A06 + View
Brassica rapa BraA03t10454Z A03 - View
Brassica rapa BraA02t05752Z A02 - View
Beta vulgaris EL10Ac7g15970 K11252 - histone H2B (H2B) Chr7_EL10_PGA_scaffold5 + View
Capsicum annuum CAN.G394.26 PGAv.1.6.scaffold394 + View
Cicer arietinum L. Ca_19186_v3 Ca_LG6_v3 - View
Corylus avellana Haze_24046 Similar to Probable histone H2B.1 (Medicago truncatula OX%3D3880) 6 + View
Coffea canephora Cc06_g02990 Probable histone H2B.1 chr6 + View
Citrus clementina Ciclev10013909m.g scaffold_6 + View
Citrus clementina Ciclev10029263m.g scaffold_8 + View
Carpinus fangiana Cfa011455 Cfa04 + View
Cardamine hirsuta CARHR273520 Histone H2B Chr8 + View
Cardamine hirsuta CARHR121850 Histone H2B Chr4 + View
Cardamine hirsuta CARHR210790 Histone H2B Chr6 + View
Cardamine hirsuta CARHR154340 Histone H2B Chr5 - View
Carya illinoinensis CiPaw.14G071100 K11252 - histone H2B (H2B) Chr14 - View
Carya illinoinensis CiPaw.10G143000 K11252 - histone H2B (H2B) Chr10 + View
Carya illinoinensis CiPaw.13G098000 KOG1744 - Histone H2B Chr13 - View
Citrullus lanatus ClCG02G020380 Histone H2B CG_Chr02 - View
Citrullus lanatus ClCG10G020920 Histone H2B CG_Chr10 + View
Cucumis melo MELO3C009279.2 Histone H2B chr04 + View
Cucumis melo MELO3C013684.2 histone H2B chr11 + View
Carica papaya Cpa.g.sc190.16 supercontig_190 - View
Chenopodium quinoa AUR62001825 Probable histone H2B.1 C_Quinoa_Scaffold_2716 - View
Chenopodium quinoa AUR62009612 HIS2B: Histone H2B C_Quinoa_Scaffold_2493 - View
Capsella rubella Carub.0005s1183 K11252 - histone H2B (H2B) scaffold_5 - View
Capsella rubella Carub.0008s2052 K11252 - histone H2B (H2B) scaffold_8 - View
Cucumis sativus L. CsaV3_3G035090 Histone H2B chr3 - View
Daucus carota DCAR_005989 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_015610 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_018894 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv35638 GWHABJS00000015 - View
Davidia involucrata Dinv06154 GWHABJS00000007 + View
Durio zibethinus Duzib170G0929 NW_019167871.1 - View
Durio zibethinus Duzib168G2205 NW_019168159.1 - View
Durio zibethinus Duzib093G2084 NW_019167937.1 + View
Eucalyptus grandis Eucgr.J02067 Chr10 - View
Eutrema salsugineum Thhalv10014927m.g K11252 - histone H2B (H2B) scaffold_2 - View
Eutrema salsugineum Thhalv10017370m.g K11252 - histone H2B (H2B) scaffold_10 + View
Eutrema salsugineum Thhalv10017408m.g K11252 - histone H2B (H2B) scaffold_10 + View
Eutrema salsugineum Thhalv10002705m.g K11252 - histone H2B (H2B) scaffold_4 + View
Fragaria x ananassa FAN05G0404 KOG1744 - Histone H2B Fvb6-3 + View
Fragaria x ananassa FAN11G0837 PF00125 - Core histone H2A/H2B/H3/H4 (Histone) Fvb3-4 + View
Fragaria x ananassa FAN25G0302 K11252 - histone H2B (H2B) Fvb3-1 + View
Fragaria x ananassa FAN05G0530 K11252 - histone H2B (H2B) Fvb6-3 + View
Fragaria x ananassa FAN09G3408 K11252 - histone H2B (H2B) Fvb6-2 + View
Fragaria x ananassa FAN25G2002 K11252 - histone H2B (H2B) Fvb3-1 + View
Fragaria x ananassa FAN14G1419 K11252 - histone H2B (H2B) Fvb6-1 + View
Fragaria x ananassa FAN21G2361 K11252 - histone H2B (H2B) Fvb3-2 + View
Fragaria x ananassa FAN16G2803 K11252 - histone H2B (H2B) Fvb3-3 + View
Fragaria vesca FvH4_6g14330 K11252 - histone H2B (H2B) Fvb6 - View
Gossypium hirsutum Gohir.D07G100400 K11252 - histone H2B (H2B) D07 + View
Gossypium hirsutum Gohir.D13G233900 K11252 - histone H2B (H2B) D13 - View
Gossypium hirsutum Gohir.A03G039100 K11252 - histone H2B (H2B) A03 + View
Gossypium hirsutum Gohir.D04G119300 K11252 - histone H2B (H2B) D04 + View
Gossypium hirsutum Gohir.A07G096000 K11252 - histone H2B (H2B) A07 + View
Gossypium hirsutum Gohir.D08G010600 K11252 - histone H2B (H2B) D08 + View
Gossypium hirsutum Gohir.D03G128700 K11252 - histone H2B (H2B) D03 - View
Glycine max Glyma.12G065100 K11252 - histone H2B (H2B) Gm12 - View
Glycine max Glyma.11G141600 K11252 - histone H2B (H2B) Gm11 - View
Glycine max Glyma.03G172500 K11252 - histone H2B (H2B) Gm03 - View
Glycine max Glyma.19G173400 K11252 - histone H2B (H2B) Gm19 - View
Gossypium raimondii Gorai.003G135400 Chr03 - View
Gossypium raimondii Gorai.001G108300 Chr01 + View
Gossypium raimondii Gorai.013G264700 Chr13 - View
Hydrangea macrophylla Hma1.2p1_0035F.1_g022110 Hma1.2p1_0035F.1 - View
Lupinus albus Lalb_Chr22g0349971 K11252 - histone H2B (H2B) Lalb_Chr22 - View
Lupinus albus Lalb_Chr14g0375021 K11252 - histone H2B (H2B) Lalb_Chr14 + View
Lupinus albus Lalb_Chr03g0026791 K11252 - histone H2B (H2B) Lalb_Chr03 - View
Lupinus albus Lalb_Chr19g0137711 K11252 - histone H2B (H2B) Lalb_Chr19 - View
Lupinus albus Lalb_Chr24g0394241 K11252 - histone H2B (H2B) Lalb_Chr24 - View
Lupinus albus Lalb_Chr01g0003781 K11252 - histone H2B (H2B) Lalb_Chr01 - View
Lotus japonicus Lj1g0012441 K11252 - histone H2B (H2B) chr1 + View
Lotus japonicus Lj3g0019527 K11252 - histone H2B (H2B) chr3 - View
Lonicera japonica Lj1P157T37 GWHAAZE00000001 - View
Lonicera japonica Lj2P1056T29 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_8_77740 K11252 - histone H2B (H2B) Lsat_1_v8_lg_8 - View
Lactuca sativa Lsat_1_v5_gn_0_37721 K11252 - histone H2B (H2B) Lsat_1_v8_lg_9 + View
Magnolia biondii MBI14_g26671_MAGBIO AED:0.21 Chr14 + View
Magnolia biondii MBI05_g45877_MAGBIO AED:0.35 Chr05 + View
Malus domestica MD11G1144100 Histone superfamily protein Chr11 - View
Malus domestica MD11G1112800 Histone superfamily protein Chr11 - View
Malus domestica MD04G1120800 Histone superfamily protein Chr04 + View
Malus domestica MD03G1097700 Histone superfamily protein Chr03 - View
Malus domestica MD12G1138100 Histone superfamily protein Chr12 + View
Manihot esculenta Manes.08G076860 Chromosome08 - View
Manihot esculenta Manes.10G052900 Chromosome10 + View
Manihot esculenta Manes.04G031500 Chromosome04 + View
Medicago truncatula Medtr7g099960 core histone H2A/H2B/H3/H4 chr7 - View
Medicago truncatula Medtr4g063200 core histone H2A/H2B/H3/H4 chr4 + View
Medicago truncatula Medtr1g068600 histone H2A 6 chr1 + View
Nelumbo nucifera Nn2g10468 chr2 + View
Nicotiana tabacum Nitab4.5_0000070g0170 Histone H2B, Histone core, Histone-fold Nitab4.5_0000070 + View
Nicotiana tabacum Nitab4.5_0000610g0060 Histone core, Histone H2B, Histone-fold Nitab4.5_0000610 - View
Nicotiana tabacum Nitab4.5_0003782g0080 Histone core, Histone H2B, Histone-fold Nitab4.5_0003782 - View
Petunia axillaris Peaxi162Scf00406g00025 Histone H2B Peaxi162Scf00406 - View
Petunia axillaris Peaxi162Scf00679g00013 Histone H2B.10 Peaxi162Scf00679 + View
Punica granatum PGR004G0166 NC_045131.1 + View
Punica granatum PGR102G2144 NC_045129.1 + View
Prunus persica Prupe.6G082000 K11252 - histone H2B (H2B) Pp06 - View
Prunus persica Prupe.6G250100 K11252 - histone H2B (H2B) Pp06 + View
Papaver somniferum PSO566G0129 NW_020627707.1 + View
Papaver somniferum PSO339G3576 NC_039366.1 + View
Papaver somniferum PSO384G4519 NC_039368.1 - View
Papaver somniferum PSO648G0048 NW_020648748.1 - View
Populus trichocarpa Potri.009G028001 K11252 - histone H2B (H2B) Chr09 + View
Phaseolus vulgaris Phvul.011G066100 K11252 - histone H2B (H2B) Chr11 - View
Quercus lobata QL07p047169 7 + View
Quercus lobata QL01p033010 1 - View
Rosa chinensis RcHm_v2.0_Chr5g0063121 RcHm_v2.0_Chr5 + View
Rosa chinensis RcHm_v2.0_Chr3g0467331 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim01G0224900 chr01 + View
Salix brachista Sabra09G0019100 GWHAAZH00000009 + View
Simmondsia chinensis Sc12g0001640 GWHAASQ00000012 + View
Simmondsia chinensis Sc21g0005540 GWHAASQ00000021 + View
Sechium edule Sed0013490 LG05 + View
Sechium edule Sed0027644 LG01 - View
Sechium edule Sed0010120 LG04 - View
Sapria himalayana SHI05967 scaffold2_22354274 - View
Solanum lycopersicum Solyc06g075800.1 Histone H2B (AHRD V3.3 *-* A0A1Q3BKM6_CEPFO) SL4.0ch06 + View
Solanum lycopersicum Solyc06g005390.1 Histone H2B (AHRD V3.3 *** A0A1U8GXA4_CAPAN) SL4.0ch06 + View
Schrenkiella parvula Sp4g11580 K11252 - histone H2B (H2B) ch4-6 + View
Schrenkiella parvula Sp6g21620 K11252 - histone H2B (H2B) ch6-6 + View
Schrenkiella parvula Sp5g15570 K11252 - histone H2B (H2B) ch5-1 + View
Solanum pennellii Sopen06g032230 Histone H2B - Gossypium hirsutum (Upland cotton), Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases. | histone B2 (HTB2) | FUNCTIONS IN: DNA binding | INVOLVED IN: nucleosome assembly | LOCATED IN: nucleolus, nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Histone H2B , Histone-fold , Histone core | BEST Arabidopsis thaliana protein match is: Histone superfamily protein Spenn-ch06 + View
Solanum pennellii Sopen06g001360 Histone H2B - Gossypium hirsutum (Upland cotton), Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases. | histone B2 (HTB2) | FUNCTIONS IN: DNA binding | INVOLVED IN: nucleosome assembly | LOCATED IN: nucleolus, nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Histone H2B , Histone-fold , Histone core | BEST Arabidopsis thaliana protein match is: Histone superfamily protein Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG403030312 Histone H2B ST4.03ch06 + View
Solanum tuberosum PGSC0003DMG400029167 Histone H2B.11 ST4.03ch06 - View
Selenicereus undatus Hund04991 Scaffold_19641 - View
Selenicereus undatus Hund18935 Scaffold_33675 - View
Trochodendron aralioides TAR369G1136 group18 + View
Trochodendron aralioides TAR633G2668 group2 - View
Trochodendron aralioides TAR636G0296 group1 + View
Theobroma cacao Thecc.09G326200 Histone superfamily protein Chromosome_9 - View
Theobroma cacao Thecc.05G044700 Histone superfamily protein Chromosome_5 - View
Tarenaya hassleriana THA.LOC104800646 histone H2B NW_010969548.1 + View
Tarenaya hassleriana THA.LOC104826343 histone H2B.11-like NW_010967707.1 + View
Tarenaya hassleriana THA.LOC104814858 histone H2B.11-like isoform X2 NW_010965541.1 - View
Tarenaya hassleriana THA.LOC104799465 histone H2B.7-like NW_010968505.1 + View
Trifolium pratense TPR.G10207 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI79G0399 NC_052238.1 - View
Vigna mungo VMungo1127G1951 CM024076.1 - View
Vanilla planifolia HPP92_015400 Histone H2B *** CM028156.1 - View
Vanilla planifolia HPP92_018118 Histone H2B *-* CM028158.1 + View
Vitis vinifera GSVIVG01025025001 chr6 + View
Zea mays Zm00001eb397510 Zm00001e038466 Histone H2B 9 - View
Zea mays Zm00001eb124070 Zm00001e016882 Histone H2B 3 + View