Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0014638 PREDICTED: pentatricopeptide repeat-containing protein At2g40720 [Vitis vinifera] Chr7 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G6100 LG-11 - View
Actinidia chinensis Actinidia20799 Lachesis_group0 + View
Actinidia chinensis Actinidia11499 Lachesis_group21 + View
Arabidopsis lyrata AL4G38580 scaffold_4 + View
Avicennia marina MSTRG.165 ScioBoG_102831_HRSCAF_103044 - View
Aquilegia oxysepala Aqoxy2G00699 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.97QYBJ PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) arahy.Tifrunner.gnm1.Arahy.07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5YY8MK K03626 - nascent polypeptide-associated complex subunit alpha (EGD2, NACA) arahy.Tifrunner.gnm1.Arahy.20 + View
Arabidopsis thaliana AT2G40720 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21300.1)%3B Has 52244 Blast hits to 13768 proteins in 266 species: Archae - 0%3B Bacteria - 9%3B Metazoa - 106%3B Fungi - 105%3B Plants - 51420%3B Viruses - 0%3B Other Eukaryotes - 604 (source: NCBI BLink). Chr2 + View
Amborella trichopoda ATR1127G081 AmTr_v1.0_scaffold00077 + View
Brassica carinata BcaC07g39963 ChrC07 - View
Brassica napus A09p49440 A09 - View
Brassica napus C08p31800 C08 - View
Brassica oleracea BolC8t50801H C8 - View
Brassica rapa BraA03t11512Z A03 + View
Cicer arietinum L. Ca_20717_v3 Ca_LG6_v3 - View
Cicer arietinum L. Ca_15213_v3 Ca_LG5_v3 + View
Cicer arietinum L. Ca_07770_v3 Ca_LG3_v3 - View
Corylus avellana Haze_17323 Similar to PCMP-H28: Pentatricopeptide repeat-containing protein At4g21065 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc02_g05310 Pentatricopeptide repeat-containing protein At2g40720 chr2 - View
Citrus clementina Ciclev10033814m.g scaffold_4 + View
Ceratophyllum demersum CDE04G2848 2 - View
Carpinus fangiana Cfa001238 Cfa01 - View
Cardamine hirsuta CARHR135810 Pentatricopeptide repeat-containing protein, putative Chr4 + View
Carya illinoinensis CiPaw.09G147700 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Chr09 + View
Carya illinoinensis CiPaw.10G165600 PTHR31451:SF17 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 6 Chr10 - View
Carica papaya Cpa.g.sc19.49 supercontig_19 - View
Carica papaya Cpa.g.sc13.182 supercontig_13 + View
Capsella rubella Carub.0004s2300 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_4 + View
Davidia involucrata Dinv25355 GWHABJS00000012 + View
Davidia involucrata Dinv34492 GWHABJS00000009 - View
Durio zibethinus Duzib114G1015 NW_019167926.1 - View
Erigeron canadensis ECA233G0205 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.J00110 Chr10 - View
Eucalyptus grandis Eucgr.A00723 Chr01 + View
Erythranthe guttata Migut.F01236 scaffold_6 + View
Erythranthe guttata Migut.F00579 scaffold_6 + View
Eutrema salsugineum Thhalv10005859m.g PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_19 + View
Eutrema salsugineum Thhalv10017587m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_10 + View
Fragaria x ananassa FAN09G0256 PF01535 - PPR repeat (PPR) Fvb6-2 + View
Fragaria x ananassa FAN02G4389 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6-4 - View
Lotus japonicus Lj1g0004405 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) chr1 - View
Lonicera japonica Lj2C58T5 GWHAAZE00000002 + View
Lonicera japonica Lj8C53G21 GWHAAZE00000008 - View
Malus domestica MD07G1229500 Tetratricopeptide repeat (TPR)-like superfamily protein Chr07 + View
Manihot esculenta Manes.10G001800 Chromosome10 - View
Medicago truncatula Medtr5g075480 ribonuclease T2 family protein chr5 + View
Medicago truncatula Medtr8g005670 mannan endo-1,4-beta-mannosidase-like protein chr8 + View
Olea europaea Oeu018738.1 chr11 + View
Punica granatum PGR004G0988 NC_045131.1 - View
Punica granatum PGR044G0428 NC_045134.1 + View
Pisum sativum Psat5g068240 Pentatricopeptide repeat chr5LG3 + View
Phaseolus vulgaris Phvul.009G044200 K03626 - nascent polypeptide-associated complex subunit alpha (EGD2, NACA) Chr09 - View
Rosa chinensis RcHm_v2.0_Chr1g0373421 RcHm_v2.0_Chr1 - View
Rhododendron simsii Rhsim04G0121000 chr04 + View
Salix brachista Sabra06G0085400 GWHAAZH00000006 - View
Simmondsia chinensis Sc04g0002600 GWHAASQ00000004 - View
Simmondsia chinensis Sc11g0005870 GWHAASQ00000011 + View
Solanum lycopersicum Solyc06g051150.1 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2U1NNB9_ARTAN) SL4.0ch06 + View
Solanum lycopersicum Solyc06g048900.1 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2Y9A8_CAPAN) SL4.0ch06 - View
Solanum lycopersicum Solyc09g015370.1 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R528_9MAGN) SL4.0ch09 + View
Schrenkiella parvula Sp4g23030 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch4-6 + View
Solanum pennellii Sopen06g015210 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch06 - View
Solanum pennellii Sopen05g030810 hypothetical protein Spenn-ch05 + View
Solanum tuberosum PGSC0003DMG400016630 Gene of unknown function ST4.03ch06 + View
Trochodendron aralioides TAR636G0379 group1 + View
Trochodendron aralioides TAR369G0412 group18 - View
Tarenaya hassleriana THA.LOC104803298 pentatricopeptide repeat-containing protein At2g40720 NW_010970652.1 + View
Tripterygium wilfordii TWI74G1576 NC_052234.1 + View
Tripterygium wilfordii TWI09G1065 NC_052245.1 - View
Vitis vinifera GSVIVG01032665001 chr13 + View
Zea mays Zm00001eb195470 Zm00001e113456 4 - View
Zea mays Zm00001eb149620 Zm00001e019452 Putative pentatricopeptide repeat-containing protein 3 - View