Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0047404 PREDICTED: ethylene-responsive transcription factor ERF109 [Prunus mume] Chr3 + View
CSS0034219 PREDICTED: ethylene-responsive transcription factor ERF109-like [Eucalyptus grandis] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr5.2701 chr5 + View
Actinidia chinensis Actinidia00441 Lachesis_group12 - View
Actinidia chinensis Actinidia16494 Lachesis_group25 - View
Arabidopsis lyrata AL8G44360 scaffold_8 + View
Avicennia marina MSTRG.1098 ScioBoG_102833_HRSCAF_103052 + View
Avicennia marina MSTRG.16745 ScioBoG_19743_HRSCAF_19834 + View
Avicennia marina MSTRG.27725 ScioBoG_94932_HRSCAF_95134 - View
Avicennia marina MSTRG.20155 ScioBoG_26180_HRSCAF_26306 - View
Aquilegia oxysepala Aqoxy6G01326 CHR06 + View
Arabidopsis thaliana AT5G67000 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. Integrase-type DNA-binding superfamily protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%2C chloroplast%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G67010.1)%3B Has 4646 Blast hits to 4643 proteins in 217 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 4641%3B Viruses - 0%3B Other Eukaryotes - 5 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC06g34777 ChrC06 - View
Brassica oleracea BolC7t42994H C7 + View
Brassica rapa BraA07t29418Z A07 + View
Beta vulgaris EL10Ac6g15751 PF00847 - AP2 domain (AP2) Chr6_EL10_PGA_scaffold0 + View
Cannabis sativa CANSAT01G2131 NC_044373.1 - View
Cicer arietinum L. Ca_18684_v3 Ca_LG6_v3 - View
Corylus avellana Haze_10078 Similar to ERF109: Ethylene-responsive transcription factor ERF109 (Arabidopsis thaliana OX%3D3702) 9 - View
Corylus avellana Haze_15411 Similar to ERF113: Ethylene-responsive transcription factor ERF113 (Arabidopsis thaliana OX%3D3702) 11 + View
Citrus clementina Ciclev10028930m.g scaffold_8 + View
Citrus clementina Ciclev10027548m.g scaffold_7 - View
Carpinus fangiana Cfa004013 Cfa01 - View
Carya illinoinensis CiPaw.01G018600 PF00847 - AP2 domain (AP2) Chr01 + View
Citrullus lanatus ClCG01G016800 Ethylene-responsive transcription factor 10 CG_Chr01 - View
Citrullus lanatus ClCG02G005910 Ethylene responsive transcription factor 2a CG_Chr02 - View
Cucumis melo MELO3C007559.2 ethylene-responsive transcription factor ERF109-like chr08 - View
Cucumis melo MELO3C018447.2 ethylene-responsive transcription factor ERF109-like chr01 - View
Corchorus olitorius COL.COLO4_32656 hypothetical protein AWUE01021139.1 + View
Carica papaya Cpa.g.sc62.11 supercontig_62 + View
Carica papaya Cpa.g.sc55.155 supercontig_55 + View
Chenopodium quinoa AUR62001935 ERF117: Ethylene-responsive transcription factor ERF117 C_Quinoa_Scaffold_4480 + View
Chenopodium quinoa AUR62003875 ERF114: Ethylene-responsive transcription factor ERF114 C_Quinoa_Scaffold_2370 - View
Capsella rubella Carub.0008s2749 PTHR31194//PTHR31194:SF0 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF3-RELATED scaffold_8 + View
Cucumis sativus L. CsaV3_7G008630 Ethylene-responsive transcription factor chr7 + View
Cucumis sativus L. CsaV3_6G043230 ethylene-responsive transcription factor ERF109-like chr6 - View
Daucus carota DCAR_022022 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv23620 GWHABJS00000005 - View
Davidia involucrata Dinv42157 GWHABJS00000002 + View
Davidia involucrata Dinv39856 GWHABJS00000014 - View
Durio zibethinus Duzib132G0581 NW_019167915.1 - View
Durio zibethinus Duzib052G0744 NW_019167849.1 + View
Durio zibethinus Duzib248G0373 NW_019168048.1 + View
Durio zibethinus Duzib187G1658 NW_019167860.1 + View
Durio zibethinus Duzib147G1170 NW_019168470.1 + View
Erigeron canadensis ECA232G4874 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.H01659 Chr08 - View
Eucalyptus grandis Eucgr.I01153 Chr09 + View
Erythranthe guttata Migut.B00347 scaffold_2 - View
Eutrema salsugineum Thhalv10005619m.g PTHR31194:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF3-RELATED scaffold_6 - View
Fragaria x ananassa FAN19G1205 PF00847 - AP2 domain (AP2) Fvb1-4 - View
Fragaria x ananassa FAN26G3270 PF00847 - AP2 domain (AP2) Fvb1-2 - View
Fragaria x ananassa FAN20G0248 PF00847 - AP2 domain (AP2) Fvb2-3 - View
Fragaria vesca FvH4_2g06050 PF00847 - AP2 domain (AP2) Fvb2 + View
Fragaria vesca FvH4_1g15960 PF00847 - AP2 domain (AP2) Fvb1 - View
Gossypium hirsutum Gohir.D12G069000 PF00847 - AP2 domain (AP2) D12 + View
Gossypium hirsutum Gohir.A12G071200 PF00847 - AP2 domain (AP2) A12 + View
Gossypium hirsutum Gohir.A03G189400 PF00847 - AP2 domain (AP2) A03 + View
Gossypium hirsutum Gohir.D02G210000 PF00847 - AP2 domain (AP2) D02 + View
Gossypium hirsutum Gohir.D13G038900 PF00847 - AP2 domain (AP2) D13 - View
Gossypium hirsutum Gohir.A02G159000 PF00847 - AP2 domain (AP2) A02 + View
Gossypium hirsutum Gohir.A13G040200 PF00847 - AP2 domain (AP2) A13 - View
Gossypium hirsutum Gohir.D03G021500 PF00847 - AP2 domain (AP2) D03 - View
Glycine max Glyma.02G132500 PF00847 - AP2 domain (AP2) Gm02 + View
Glycine max Glyma.07G212400 PF00847 - AP2 domain (AP2) Gm07 - View
Gossypium raimondii Gorai.008G075600 Chr08 - View
Gossypium raimondii Gorai.003G023200 Chr03 - View
Gossypium raimondii Gorai.005G238000 Chr05 + View
Gossypium raimondii Gorai.013G043700 Chr13 - View
Lupinus albus Lalb_Chr05g0219151 PF00847 - AP2 domain (AP2) Lalb_Chr05 - View
Lupinus albus Lalb_Chr16g0384721 PF00847 - AP2 domain (AP2) Lalb_Chr16 - View
Lotus japonicus Lj4g0003208 PF00847 - AP2 domain (AP2) chr4 + View
Lotus japonicus Lj4g0002903 PF00847 - AP2 domain (AP2) chr4 - View
Lonicera japonica Lj4P146T12 GWHAAZE00000004 - View
Lonicera japonica Lj5P209T52 GWHAAZE00000005 - View
Lonicera japonica Lj9C358T5 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_5_112660 PF00847 - AP2 domain (AP2) Lsat_1_v8_lg_5 + View
Lactuca sativa Lsat_1_v5_gn_4_166540 Lsat_1_v8_lg_4 + View
Magnolia biondii MBI10_g39638_MAGBIO AED:0.02 Chr10 - View
Malus domestica MD02G1171300 redox responsive transcription factor 1 Chr02 - View
Malus domestica MD05G1080900 redox responsive transcription factor 1 Chr05 - View
Malus domestica MD15G1283200 redox responsive transcription factor 1 Chr15 - View
Manihot esculenta Manes.13G125100 Chromosome13 + View
Medicago truncatula Medtr4g086160 AP2/ERF domain transcription factor chr4 + View
Nelumbo nucifera Nn1g04860 chr1 + View
Nelumbo nucifera Nn5g30323 chr5 + View
Nicotiana tabacum Nitab4.5_0002016g0060 AP2/ERF domain, DNA-binding domain Nitab4.5_0002016 - View
Olea europaea Oeu050782.1 chr18 + View
Petunia axillaris Peaxi162Scf00016g00183 redox responsive transcription factor 1 Peaxi162Scf00016 + View
Punica granatum PGR042G0553 NC_045130.1 - View
Punica granatum PGR102G0683 NC_045129.1 + View
Prunus persica Prupe.7G134100 PF00847 - AP2 domain (AP2) Pp07 + View
Prunus persica Prupe.8G125100 PF00847 - AP2 domain (AP2) Pp08 - View
Papaver somniferum PSO675G2858 NC_039358.1 - View
Papaver somniferum PSO541G5599 NC_039363.1 - View
Populus trichocarpa Potri.007G043400 PF00847 - AP2 domain (AP2) Chr07 - View
Populus trichocarpa Potri.009G101900 PF00847 - AP2 domain (AP2) Chr09 + View
Populus trichocarpa Potri.004G141200 PF00847 - AP2 domain (AP2) Chr04 + View
Quercus lobata QL06p041490 6 + View
Quercus lobata QL11p035934 11 + View
Rosa chinensis RcHm_v2.0_Chr2g0105221 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim05G0084300 chr05 - View
Rhododendron simsii Rhsim11G0165600 chr11 + View
Striga asiatica SGA_v2.0_scaffold90G27657 scaffold90 + View
Striga asiatica SGA_v2.0_scaffold32G13066 scaffold32 + View
Salvia bowleyana SalBow6G4653 GWHASIU00000002 - View
Salix brachista Sabra09G0077900 GWHAAZH00000009 + View
Salix brachista Sabra04G0093000 GWHAAZH00000004 + View
Salix brachista Sabra07G0038300 GWHAAZH00000007 - View
Simmondsia chinensis Sc16g0004700 GWHAASQ00000016 - View
Sechium edule Sed0026144 LG10 + View
Sechium edule Sed0025007 LG14 - View
Solanum lycopersicum Solyc04g051360.3 Ethylene Response Factor D.1 SL4.0ch04 + View
Solanum lycopersicum Solyc02g090770.1 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G3A6X8_CAPAN) SL4.0ch02 - View
Schrenkiella parvula Sp2g29660 PTHR31194//PTHR31194:SF0 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF3-RELATED ch2-4 + View
Solanum pennellii Sopen02g035400 encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. | ERF domain protein 11 (ERF11) | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400004024 AP2/ERF domain-containing transcription factor ST4.03ch02 + View
Trochodendron aralioides TAR628G1358 group5 + View
Trochodendron aralioides TAR625G1412 group4 - View
Trochodendron aralioides TAR381G0413 group11 - View
Trochodendron aralioides TAR376G0827 group14 + View
Theobroma cacao Thecc.01G055100 Chromosome_1 - View
Theobroma cacao Thecc.02G100800 Redox responsive transcription factor 1 Chromosome_2 - View
Tarenaya hassleriana THA.LOC104819579 ethylene-responsive transcription factor ERF109-like NW_010966177.1 + View
Tarenaya hassleriana THA.LOC104821258 putative ethylene-responsive transcription factor ERF121 NW_010966459.1 + View
Tarenaya hassleriana THA.LOC104804373 ethylene-responsive transcription factor ERF109-like NW_010971389.1 - View
Tripterygium wilfordii TWI73G0426 NC_052232.1 + View
Tripterygium wilfordii TWI31G0072 NC_052233.1 + View
Tripterygium wilfordii TWI79G1533 NC_052238.1 + View
Vaccinium macrocarpon vmacro21551 Similar to ERF114: Ethylene-responsive transcription factor ERF114 (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G2704 CM024069.1 - View
Vitis vinifera GSVIVG01031747001 chr3 + View