Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG8G2610 | LG-8 | + | View | |
Acer truncatum | Atru.chr2.2711 | chr2 | + | View | |
Actinidia chinensis | Actinidia18762 | Lachesis_group9 | + | View | |
Actinidia chinensis | Actinidia05623 | Lachesis_group20 | - | View | |
Actinidia chinensis | Actinidia35254 | Lachesis_group2 | + | View | |
Actinidia chinensis | Actinidia01887 | Lachesis_group0 | - | View | |
Arabidopsis lyrata | AL3G27880 | scaffold_3 | + | View | |
Avicennia marina | MSTRG.15221 | ScioBoG_19538_HRSCAF_19626 | - | View | |
Avicennia marina | MSTRG.6840 | ScioBoG_102840_HRSCAF_103099 | + | View | |
Aquilegia oxysepala | Aqoxy1G02485 | CHR01 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.YHI9TY | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | arahy.Tifrunner.gnm1.Arahy.18 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.YA7R1N | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | arahy.Tifrunner.gnm1.Arahy.08 | - | View |
Arabidopsis thaliana | AT3G15380 | Plasma-membrane choline transporter family protein Encodes a member of a choline transporter-like protein family that facilitates choline transport%2C localizes to the trans-Golgi network%2C and during cytokinesis is associated with the phragmoplast. Loss-of-function results in an altered choline metabolite profile%2C defects in sieve plate and sieve pore formation and impaired phloem transport. Plasma-membrane choline transporter family protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603)%3B Has 948 Blast hits to 937 proteins in 182 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 503%3B Fungi - 120%3B Plants - 118%3B Viruses - 0%3B Other Eukaryotes - 207 (source: NCBI BLink). | Chr3 | + | View |
Amborella trichopoda | ATR0680G284 | AmTr_v1.0_scaffold00009 | + | View | |
Brassica carinata | BcaC05g28976 | ChrC05 | - | View | |
Brassica carinata | BcaB04g20929 | ChrB04 | - | View | |
Brassica carinata | BcaC01g03876 | ChrC01 | - | View | |
Brassica carinata | BcaC09g48503 | ChrC09 | + | View | |
Brassica carinata | BcaB06g29569 | ChrB06 | + | View | |
Brassica napus | A01p38720 | A01 | + | View | |
Brassica napus | C03p47660 | C03 | + | View | |
Brassica napus | C05p51790 | C05 | - | View | |
Brassica napus | C01p49070 | C01 | - | View | |
Brassica napus | A05p34020 | A05 | - | View | |
Brassica napus | A03p39290 | A03 | + | View | |
Brassica oleracea | BolC5t33865H | C5 | - | View | |
Brassica oleracea | BolC1t04870H | C1 | - | View | |
Brassica rapa | BraA03t13080Z | A03 | + | View | |
Brassica rapa | BraA05t22224Z | A05 | - | View | |
Brassica rapa | BraA01t03913Z | A01 | - | View | |
Beta vulgaris | EL10Ac4g08143 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | Chr4_EL10_PGA_scaffold1 | - | View |
Capsicum annuum | CAN.G162.68 | PGAv.1.6.scaffold162 | + | View | |
Cannabis sativa | CANSAT56G0567 | NC_044371.1 | + | View | |
Cicer arietinum L. | Ca_01833_v3 | Ca_LG1_v3 | - | View | |
Corylus avellana | Haze_09456 | Similar to CHER1: Choline transporter protein 1 (Arabidopsis thaliana OX%3D3702) | 4 | + | View |
Coffea canephora | Cc05_g12200 | Putative CTL-like protein 1 | chr5 | + | View |
Citrus clementina | Ciclev10007637m.g | scaffold_1 | + | View | |
Carpinus fangiana | Cfa020557 | Cfa08 | - | View | |
Cardamine hirsuta | CARHR090420 | Choline transporter like family | Chr3 | + | View |
Carya illinoinensis | CiPaw.11G172300 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | Chr11 | + | View |
Citrullus lanatus | ClCG11G018140 | Choline transporter-related family protein | CG_Chr11 | + | View |
Cucumis melo | MELO3C016707.2 | Choline transporter-like protein 2 | chr07 | - | View |
Corchorus olitorius | COL.COLO4_09421 | Choline transporter-like protein | AWUE01014232.1 | + | View |
Carica papaya | Cpa.g.sc80.47 | supercontig_80 | + | View | |
Chenopodium quinoa | AUR62029372 | slc44a5a: Choline transporter-like protein 5-A | C_Quinoa_Scaffold_2939 | - | View |
Chenopodium quinoa | AUR62034265 | slc44a5a: Choline transporter-like protein 5-A | C_Quinoa_Scaffold_1337 | + | View |
Capsella rubella | Carub.0003s1510 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | scaffold_3 | + | View |
Cucumis sativus L. | CsaV3_4G033780 | choline transporter-like protein 2 | chr4 | + | View |
Daucus carota | DCAR_019547 | hypothetical protein | DCARv2_Chr5 | - | View |
Davidia involucrata | Dinv08306 | GWHABJS00000013 | - | View | |
Davidia involucrata | Dinv04314 | GWHABJS00000001 | + | View | |
Davidia involucrata | Dinv07551 | GWHABJS00000020 | + | View | |
Durio zibethinus | Duzib213G0462 | NW_019167993.1 | - | View | |
Eucalyptus grandis | Eucgr.F01103 | Chr06 | - | View | |
Erythranthe guttata | Migut.M00849 | scaffold_13 | + | View | |
Eutrema salsugineum | Thhalv10020171m.g | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | scaffold_13 | - | View |
Fragaria x ananassa | FAN16G2459 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | Fvb3-3 | + | View |
Fragaria x ananassa | FAN25G0303 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | Fvb3-1 | - | View |
Fragaria x ananassa | FAN11G2849 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | Fvb3-4 | - | View |
Fragaria vesca | FvH4_3g20420 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | Fvb3 | + | View |
Gossypium hirsutum | Gohir.D01G052400 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | D01 | + | View |
Gossypium hirsutum | Gohir.A01G065000 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | A01 | + | View |
Gossypium hirsutum | Gohir.D11G296752 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | D11 | - | View |
Glycine max | Glyma.12G223200 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | Gm12 | - | View |
Glycine max | Glyma.13G278300 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | Gm13 | + | View |
Gossypium raimondii | Gorai.007G321200 | Chr07 | - | View | |
Gossypium raimondii | Gorai.002G072200 | Chr02 | + | View | |
Helianthus annuus | HanXRQChr11g0328451 | Putative choline transporter-like | HanXRQChr11 | + | View |
Lupinus albus | Lalb_Chr01g0006491 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | Lalb_Chr01 | - | View |
Lupinus albus | Lalb_Chr25g0286471 | PTHR12385//PTHR12385:SF47 - CTL TRANSPORTER // SUBFAMILY NOT NAMED | Lalb_Chr25 | + | View |
Lupinus albus | Lalb_Chr19g0134281 | PTHR12385//PTHR12385:SF47 - CTL TRANSPORTER // SUBFAMILY NOT NAMED | Lalb_Chr19 | + | View |
Lotus japonicus | Lj3g0021569 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | chr3 | - | View |
Lotus japonicus | Lj3g0006216 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | chr3 | + | View |
Lonicera japonica | Lj1A846T66 | GWHAAZE00000001 | + | View | |
Lonicera japonica | Lj8C157T5 | GWHAAZE00000008 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_7_105200 | Lsat_1_v8_lg_7 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_7_18881 | PTHR12385//PTHR12385:SF47 - CTL TRANSPORTER // SUBFAMILY NOT NAMED | Lsat_1_v8_lg_7 | - | View |
Magnolia biondii | MBI17_g30525_MAGBIO | AED:0.05 | Chr17 | + | View |
Malus domestica | MD03G1225500 | Plasma-membrane choline transporter family protein | Chr03 | - | View |
Manihot esculenta | Manes.15G086100 | Chromosome15 | + | View | |
Manihot esculenta | Manes.03G112000 | Chromosome03 | - | View | |
Medicago truncatula | Medtr8g059125 | plasma-membrane choline transporter family protein | chr8 | + | View |
Medicago truncatula | Medtr2g079490 | plasma-membrane choline transporter family protein | chr2 | + | View |
Nelumbo nucifera | Nn1g06580 | chr1 | + | View | |
Nicotiana tabacum | Nitab4.5_0003688g0040 | Choline transporter-like | Nitab4.5_0003688 | - | View |
Olea europaea | Oeu005419.1 | chr10 | - | View | |
Petunia axillaris | Peaxi162Scf00069g01337 | Choline transporter-like protein 2 | Peaxi162Scf00069 | - | View |
Punica granatum | PGR083G2041 | NC_045133.1 | - | View | |
Prunus persica | Prupe.4G183900 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | Pp04 | + | View |
Pisum sativum | Psat5g244680 | Plasma-membrane choline transporter | chr5LG3 | + | View |
Papaver somniferum | PSO675G9024 | NC_039358.1 | - | View | |
Papaver somniferum | PSO541G1226 | NC_039363.1 | - | View | |
Populus trichocarpa | Potri.011G121100 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | Chr11 | + | View |
Phaseolus vulgaris | Phvul.005G082401 | Chr05 | + | View | |
Quercus lobata | QL08p020494 | 8 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr5g0034311 | RcHm_v2.0_Chr5 | + | View | |
Rhododendron simsii | Rhsim06G0197100 | chr06 | - | View | |
Rhododendron simsii | Rhsim04G0020100 | chr04 | - | View | |
Striga asiatica | SGA_v2.0_scaffold73G24287 | scaffold73 | + | View | |
Striga asiatica | SGA_v2.0_scaffold34G13734 | scaffold34 | - | View | |
Salix brachista | Sabra11G0105100 | GWHAAZH00000011 | + | View | |
Simmondsia chinensis | Sc03g0009930 | GWHAASQ00000003 | + | View | |
Sechium edule | Sed0005873 | LG04 | + | View | |
Solanum lycopersicum | Solyc07g063230.3 | Choline transporter-like protein (AHRD V3.3 *** A0A1R3ICN0_COCAP) | SL4.0ch07 | + | View |
Schrenkiella parvula | Sp3g13630 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | ch3-1 | + | View |
Solanum pennellii | Sopen07g031420 | Plasma-membrane choline transporter family protein | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 | Spenn-ch07 | + | View |
Solanum tuberosum | PGSC0003DMG400012423 | Conserved gene of unknown function | ST4.03ch07 | + | View |
Selenicereus undatus | Hund22933 | Scaffold_33680 | + | View | |
Selenicereus undatus | Hund02220 | Scaffold_33678 | + | View | |
Trochodendron aralioides | TAR624G0482 | group9 | + | View | |
Trochodendron aralioides | TAR626G1858 | group3 | - | View | |
Theobroma cacao | Thecc.07G080500 | Plasma-membrane choline transporter family protein | Chromosome_7 | - | View |
Tarenaya hassleriana | THA.LOC104810480 | choline transporter-like protein 2 | NW_010965216.1 | + | View |
Tarenaya hassleriana | THA.LOC104818067 | choline transporter-like protein 2 isoform X1 | NW_010966021.1 | - | View |
Trifolium pratense | TPR.G31511 | Tp57577_TGAC_v2_scaf_724 | + | View | |
Tripterygium wilfordii | TWI39G1274 | NC_052250.1 | - | View | |
Vaccinium macrocarpon | vmacro11852 | Similar to CHER1: Choline transporter protein 1 (Arabidopsis thaliana OX%3D3702) | chr11_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vaccinium macrocarpon | vmacro09540 | Similar to CHER1: Choline transporter protein 1 (Arabidopsis thaliana OX%3D3702) | chr6_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vigna mungo | VMungo1127G2063 | CM024076.1 | + | View | |
Vigna mungo | VMungo1080G1275 | CM024079.1 | - | View | |
Vitis vinifera | GSVIVG01014366001 | chr19 | + | View |