Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G15520 LG-6 + View
Acer truncatum Atru.chr4.107 chr4 + View
Actinidia chinensis Actinidia28868 Lachesis_group8 - View
Actinidia chinensis Actinidia28229 Lachesis_group25 + View
Arabidopsis lyrata AL7G11940 scaffold_7 - View
Avicennia marina MSTRG.23338 ScioBoG_3895_HRSCAF_3912 - View
Aquilegia oxysepala Aqoxy6G00601 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ERM2F6 PTHR12151//PTHR12151:SF1 - SCO1/SENC // PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QD8CU8 PTHR12151//PTHR12151:SF1 - SCO1/SENC // PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT4G39740 Thioredoxin superfamily protein Encodes HCC2%2C one of the two Arabidopsis genes (HCC1 and HCC2) resulting from a duplication with homology to the SCO proteins involved in copper insertion during cytochrome c oxidase (COX) assembly in other organisms. HCC2%2C which lacks the cysteines and histidine putatively involved in copper binding%2C functions in copper sensing and redox homeostasis. Thioredoxin superfamily protein%3B CONTAINS InterPro DOMAIN/s: Copper chaperone SCO1/SenC (InterPro:IPR003782)%2C Thioredoxin fold (InterPro:IPR012335)%2C Thioredoxin-like fold (InterPro:IPR012336)%3B BEST Arabidopsis thaliana protein match is: electron transport SCO1/SenC family protein (TAIR:AT3G08950.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 - View
Amborella trichopoda ATR0564G473 AmTr_v1.0_scaffold00010 + View
Brassica carinata BcaNung00896 Contig372 - View
Brassica napus C01p00760 C01 - View
Brassica oleracea BolC1t00078H C1 - View
Beta vulgaris EL10Ac6g15091 PTHR12151//PTHR12151:SF1 - SCO1/SENC // PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL Chr6_EL10_PGA_scaffold0 - View
Cannabis sativa CANSAT01G0269 NC_044373.1 + View
Cicer arietinum L. Ca_17731_v3 Ca_LG6_v3 - View
Corylus avellana Haze_24950 Similar to HCC2: Protein SCO1 homolog 2, mitochondrial (Arabidopsis thaliana OX%3D3702) 8 + View
Coffea canephora Cc07_g15340 Protein SCO1 homolog 2, mitochondrial chr7 + View
Citrus clementina Ciclev10026221m.g scaffold_7 - View
Cardamine hirsuta CARHR246980 Protein SCO1 homolog 2, mitochondrial Chr7 + View
Carya illinoinensis CiPaw.03G140700 PTHR12151:SF1 - PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL Chr03 - View
Citrullus lanatus ClCG01G018870 Protein SCO1-like protein, mitochondrial CG_Chr01 + View
Cucumis melo MELO3C007766.2 Protein sco1 chr08 + View
Chenopodium quinoa AUR62003782 HCC2: Protein SCO1 homolog 2, mitochondrial C_Quinoa_Scaffold_2370 - View
Chenopodium quinoa AUR62002019 HCC2: Protein SCO1 homolog 2, mitochondrial C_Quinoa_Scaffold_4480 + View
Capsella rubella Carub.0007s0162 PTHR12151//PTHR12151:SF1 - SCO1/SENC // PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL scaffold_7 - View
Cucumis sativus L. CsaV3_6G045530 protein SCO1 homolog 2, mitochondrial chr6 + View
Davidia involucrata Dinv21919 GWHABJS00000021 + View
Eucalyptus grandis Eucgr.H04809 Chr08 + View
Erythranthe guttata Migut.H02365 scaffold_8 + View
Eutrema salsugineum Thhalv10025949m.g PTHR12151:SF1 - PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL scaffold_1 - View
Fragaria x ananassa FAN23G0997 PTHR12151//PTHR12151:SF1 - SCO1/SENC // PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL Fvb1-3 + View
Fragaria x ananassa FAN28G1022 PTHR12151//PTHR12151:SF1 - SCO1/SENC // PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL Fvb1-1 - View
Fragaria x ananassa FAN26G3277 PTHR12151//PTHR12151:SF1 - SCO1/SENC // PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL Fvb1-2 + View
Fragaria vesca FvH4_1g21130 PTHR12151//PTHR12151:SF1 - SCO1/SENC // PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL Fvb1 + View
Gossypium hirsutum Gohir.D03G036800 PTHR12151//PTHR12151:SF1 - SCO1/SENC // PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL D03 - View
Gossypium hirsutum Gohir.A02G143800 PTHR12151//PTHR12151:SF1 - SCO1/SENC // PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL A02 + View
Glycine max Glyma.08G137200 K07152 - protein SCO1/2 (SCO1_2) Gm08 - View
Glycine max Glyma.05G179500 K07152 - protein SCO1/2 (SCO1_2) Gm05 - View
Gossypium raimondii Gorai.003G038600 Chr03 - View
Hydrangea macrophylla Hma1.2p1_0047F.1_g027930 Hma1.2p1_0047F.1 + View
Lotus japonicus Lj4g0005989 K07152 - protein SCO1/2 (SCO1_2) chr4 - View
Lonicera japonica Lj2A551T18 GWHAAZE00000002 + View
Magnolia biondii MBI02_g08738_MAGBIO AED:0.10 Chr02 - View
Malus domestica MD01G1027600 Thioredoxin superfamily protein Chr01 - View
Manihot esculenta Manes.12G136200 Chromosome12 + View
Manihot esculenta Manes.13G091800 Chromosome13 - View
Medicago truncatula Medtr8g090295 electron transport SCO1/SenC family protein, putative chr8 + View
Nelumbo nucifera Nn5g29084 chr5 - View
Nicotiana tabacum Nitab4.5_0000104g0200 Copper chaperone SCO1/SenC, Thioredoxin-like fold Nitab4.5_0000104 + View
Olea europaea Oeu056597.1 chr18 - View
Oryza sativa ssp. japonica Os09g0370200 Copper chaperone SCO1/SenC domain containing protein. chr09 - View
Punica granatum PGR102G2259 NC_045129.1 + View
Prunus persica Prupe.6G182800 Pp06 - View
Pisum sativum Psat7g053680 SCO1/SenC chr7LG7 + View
Papaver somniferum PSO541G4478 NC_039363.1 + View
Populus trichocarpa Potri.007G091300 K07152 - protein SCO1/2 (SCO1_2) Chr07 - View
Populus trichocarpa Potri.005G076700 PTHR12151//PTHR12151:SF1 - SCO1/SENC // PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL Chr05 + View
Quercus lobata QL06p049882 6 + View
Rosa chinensis RcHm_v2.0_Chr2g0114911 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim10G0159700 chr10 - View
Rhododendron simsii Rhsim08G0009800 chr08 - View
Striga asiatica SGA_v2.0_scaffold54G19496 scaffold54 - View
Salvia bowleyana SalBow3G0732 GWHASIU00000006 + View
Salix brachista Sabra05G0063300 GWHAAZH00000005 + View
Salix brachista Sabra07G0075000 GWHAAZH00000007 - View
Simmondsia chinensis Sc16g0005590 GWHAASQ00000016 - View
Sechium edule Sed0023302 LG14 + View
Sapria himalayana SHI11539 scaffold12_13443846 + View
Solanum lycopersicum Solyc04g055010.3 Protein SCO1-like protein 2, mitochondrial (AHRD V3.3 *** A0A2G2VFW1_CAPBA) SL4.0ch04 - View
Schrenkiella parvula Sp7g36150 PTHR12151:SF1 - PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL ch7-6 + View
Solanum pennellii Sopen04g024850 Thioredoxin superfamily protein | CONTAINS InterPro DOMAIN/s: Copper chaperone SCO1/SenC , Thioredoxin fold , Thioredoxin-like fold | BEST Arabidopsis thaliana protein match is: electron transport SCO1/SenC family protein Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400020613 Electron transport SCO1/SenC family protein ST4.03ch04 + View
Selenicereus undatus Hund16276 Scaffold_33677 - View
Selenicereus undatus Hund13634 Scaffold_33679 + View
Trochodendron aralioides TAR628G0934 group5 - View
Trochodendron aralioides TAR376G0898 group14 - View
Theobroma cacao Thecc.01G103500 Thioredoxin superfamily protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104807706 protein SCO1 homolog 2%2C mitochondrial NW_010963495.1 - View
Tarenaya hassleriana THA.LOC104804154 protein SCO1 homolog 2%2C mitochondrial-like NW_010971389.1 + View
Tripterygium wilfordii TWI74G0115 NC_052234.1 - View
Vaccinium macrocarpon vmacro18606 Similar to HCC2: Protein SCO1 homolog 2, mitochondrial (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View