Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0019670 40S ribosomal S11 [Gossypium arboreum] Chr12 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr7.2490 chr7 + View
Actinidia chinensis Actinidia13214 Lachesis_group18 - View
Actinidia chinensis Actinidia22319 Lachesis_group23 + View
Actinidia chinensis Actinidia21917 Lachesis_group15 + View
Actinidia chinensis Actinidia04239 Lachesis_group1 + View
Arabidopsis lyrata AL6G21700 scaffold_6 - View
Avicennia marina MSTRG.26027 ScioBoG_4119_HRSCAF_4138 + View
Aquilegia oxysepala Aqoxy7G03555 CHR07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WU89NH PF00240//PF00366//PF16205 - Ubiquitin family (ubiquitin) // Ribosomal protein S17 (Ribosomal_S17) // Ribosomal_S17 N-terminal (Ribosomal_S17_N) arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.K7E7DP KOG0001//KOG0005 - Ubiquitin and ubiquitin-like proteins // Ubiquitin-like protein arahy.Tifrunner.gnm1.Arahy.11 + View
Arabidopsis thaliana AT5G11080 Ubiquitin-like superfamily protein Ubiquitin-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626)%2C Ubiquitin supergroup (InterPro:IPR019955)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G25270.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Ubiquitin-like superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: sperm cell%2C male gametophyte%2C flower%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626)%2C Ubiquitin supergroup (InterPro:IPR019955)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G25270.1). Chr5 - View
Brassica carinata BcaNung03210 Contig1081 - View
Beta vulgaris EL10Ac8g18806 KOG0001//KOG0005 - Ubiquitin and ubiquitin-like proteins // Ubiquitin-like protein Chr8_EL10_PGA_scaffold4 + View
Beta vulgaris EL10Ac2g04161 PTHR10744//PTHR10744:SF10 - 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER // SUBFAMILY NOT NAMED Chr2_EL10_PGA_scaffold6 - View
Cicer arietinum L. Ca_21621_v3 Ca_LG7_v3 - View
Corylus avellana Haze_21467 Similar to RPS11: 40S ribosomal protein S11 (Euphorbia esula OX%3D3993) 3 - View
Coffea canephora Cc08_g00270 40S ribosomal protein S11 chr8 - View
Citrus clementina Ciclev10009763m.g scaffold_1 + View
Ceratophyllum demersum CDE05G2035 3 - View
Carpinus fangiana Cfa013109 Cfa05 - View
Carya illinoinensis CiPaw.07G226600 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Chr07 + View
Carya illinoinensis CiPaw.08G008700 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Chr08 - View
Citrullus lanatus ClCG08G013490 40S ribosomal protein S11, putative CG_Chr08 + View
Cucumis melo MELO3C011276.2 40S ribosomal protein S11 chr03 - View
Carica papaya Cpa.g.sc187.17 supercontig_187 + View
Chenopodium quinoa AUR62012439 RPS11: 40S ribosomal protein S11 C_Quinoa_Scaffold_1995 + View
Chenopodium quinoa AUR62031563 RPS11: 40S ribosomal protein S11 C_Quinoa_Scaffold_1206 + View
Chenopodium quinoa AUR62011244 dph1: Deubiquitination-protection protein dph1 C_Quinoa_Scaffold_3799 + View
Cucumis sativus L. CsaV3_2G032240 40S ribosomal protein S11 chr2 + View
Cucumis sativus L. CsaV3_4G037090 large proline-rich protein BAG6 isoform X2 chr4 - View
Davidia involucrata Dinv18182 GWHABJS00000003 + View
Davidia involucrata Dinv15882 GWHABJS00000017 + View
Davidia involucrata Dinv41430 GWHABJS00000013 - View
Durio zibethinus Duzib168G2231 NW_019168159.1 + View
Eucalyptus grandis Eucgr.C02730 Chr03 - View
Erythranthe guttata Migut.A00011 scaffold_1 - View
Erythranthe guttata Migut.E01818 scaffold_5 + View
Eutrema salsugineum Thhalv10016005m.g PTHR15204 - SCYTHE/BAT3 scaffold_2 - View
Fragaria x ananassa FAN15G0342 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Fvb2-4 - View
Fragaria x ananassa FAN24G0173 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Fvb2-2 + View
Fragaria x ananassa FAN27G0747 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Fvb2-1 - View
Fragaria x ananassa FAN20G2743 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Fvb2-3 - View
Fragaria x ananassa FAN26G2867 KOG0698//KOG1728 - Serine/threonine protein phosphatase // 40S ribosomal protein S11 Fvb1-2 + View
Fragaria x ananassa FAN23G1845 PTHR13832//PTHR13832:SF299 - PROTEIN PHOSPHATASE 2C // SUBFAMILY NOT NAMED Fvb1-3 - View
Fragaria x ananassa FAN28G0708 PF00240//PF00366//PF16205 - Ubiquitin family (ubiquitin) // Ribosomal protein S17 (Ribosomal_S17) // Ribosomal_S17 N-terminal (Ribosomal_S17_N) Fvb1-1 + View
Fragaria vesca FvH4_2g28364 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Fvb2 - View
Gossypium hirsutum Gohir.D06G049900 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) D06 + View
Glycine max Glyma.17G105900 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Gm17 - View
Glycine max Glyma.13G165200 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Gm13 + View
Glycine max Glyma.09G094200 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Gm09 + View
Gossypium raimondii Gorai.010G056800 Chr10 + View
Hydrangea macrophylla Hma1.2p1_0182F.1_g080380 Hma1.2p1_0182F.1 + View
Lupinus albus Lalb_Chr12g0198481 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Lalb_Chr12 + View
Lupinus albus Lalb_Chr13g0301241 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Lalb_Chr13 - View
Lotus japonicus Lj4g0027763 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) chr4 - View
Lonicera japonica Lj8P730T20 GWHAAZE00000008 + View
Lonicera japonica Lj7A728G59 GWHAAZE00000007 + View
Malus domestica MD15G1129800 ribosomal protein S11-beta Chr15 + View
Malus domestica MD15G1160700 ribosomal protein S11-beta Chr15 - View
Manihot esculenta Manes.16G125500 Chromosome16 + View
Nelumbo nucifera Nn2g12221 chr2 + View
Nelumbo nucifera Nn8g39683 chr8 + View
Oryza sativa ssp. japonica Os08g0295000 Conserved hypothetical protein. chr08 - View
Petunia axillaris Peaxi162Scf00116g00106 40S ribosomal protein S11 Peaxi162Scf00116 - View
Punica granatum PGR044G2142 NC_045134.1 + View
Prunus persica Prupe.1G485300 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Pp01 + View
Papaver somniferum PSO170G3194 NC_039360.1 - View
Populus trichocarpa Potri.018G115400 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Chr18 - View
Populus trichocarpa Potri.006G059700 KOG0001//KOG0005 - Ubiquitin and ubiquitin-like proteins // Ubiquitin-like protein Chr06 - View
Phaseolus vulgaris Phvul.003G173700 PTHR15204 - SCYTHE/BAT3 Chr03 + View
Quercus lobata QL02p020519 CM012294 - View
Quercus lobata QL02p091098 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr6g0297321 RcHm_v2.0_Chr6 - View
Rosa chinensis RcHm_v2.0_Chr2g0086791 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim02G0205100 chr02 + View
Salvia bowleyana SalBow4G2704 GWHASIU00000008 - View
Salix brachista Sabra06G0043100 GWHAAZH00000006 - View
Salix brachista Sabra18G0098100 GWHAAZH00000018 - View
Simmondsia chinensis Sc18g0000090 GWHAASQ00000018 - View
Trochodendron aralioides TAR625G0898 group4 + View
Trochodendron aralioides TAR636G0605 group1 + View
Theobroma cacao Thecc.09G140100 Ubiquitin-like superfamily protein Chromosome_9 + View
Theobroma cacao Thecc.09G020200 Chromosome_9 - View
Tarenaya hassleriana THA.LOC104808940 40S ribosomal protein S11-like NW_010964923.1 - View
Tripterygium wilfordii TWI63G0909 NC_052240.1 + View
Vaccinium macrocarpon vmacro11206 Similar to CIP73: Ubiquitin-like domain-containing protein CIP73 (Lotus japonicus OX%3D34305) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G1990 CM024074.1 + View
Vitis vinifera GSVIVG01012875001 chr11 + View
Vitis vinifera GSVIVG01035927001 chr4 - View