Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0039724 PREDICTED: MADS-box transcription factor 23-like isoform X2 [Vitis vinifera] Contig1202 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr1.1136 chr1 - View
Arabidopsis lyrata AL5G38720 scaffold_5 + View
Avicennia marina MSTRG.19853 ScioBoG_25048_HRSCAF_25167 + View
Avicennia marina MSTRG.6418 ScioBoG_102839_HRSCAF_103093 + View
Arabidopsis thaliana AT3G57230 AGAMOUS-like 16 MADS-box transcription factor. Expressed in leaf%2C root and stem%2C with higher RNA accumulation in guard cells and trichomes. AGAMOUS-like 16 (AGL16)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%2C stomatal lineage progression%3B LOCATED IN: nucleus%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%2C Transcription factor%2C K-box (InterPro:IPR002487)%3B BEST Arabidopsis thaliana protein match is: AGAMOUS-like 21 (TAIR:AT4G37940.1)%3B Has 7328 Blast hits to 7327 proteins in 923 species: Archae - 0%3B Bacteria - 10%3B Metazoa - 652%3B Fungi - 320%3B Plants - 6229%3B Viruses - 0%3B Other Eukaryotes - 117 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC02g09932 ChrC02 + View
Brassica napus A06p39750 A06 - View
Brassica napus C04p35030 C04 - View
Brassica napus C08p32790 C08 + View
Brassica napus A09p50280 A09 + View
Brassica oleracea BolC8t50890H C8 + View
Brassica rapa BraA09t40479Z A09 + View
Brassica rapa BraA04t16037Z A04 - View
Beta vulgaris EL10Ac3g07106 PTHR11945:SF175 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL18 Chr3_EL10_PGA_scaffold7 - View
Corylus avellana Haze_19826 Similar to AGL18: Agamous-like MADS-box protein AGL18 (Arabidopsis thaliana OX%3D3702) 10 + View
Coffea canephora Cc06_g17700 Agamous-like MADS-box protein AGL15 chr6 - View
Citrus clementina Ciclev10005698m.g scaffold_9 + View
Carpinus fangiana Cfa016796 Cfa07 + View
Cardamine hirsuta CARHR167420 AGAMOUS-like MADS-box transcription factor Chr5 + View
Carya illinoinensis CiPaw.13G155500 PTHR11945:SF170 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL11 Chr13 + View
Carya illinoinensis CiPaw.09G039300 PTHR11945//PTHR11945:SF175 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL18 Chr09 - View
Citrullus lanatus ClCG04G003520 AGAMOUS-like MADS-box transcription factor CG_Chr04 + View
Cucumis melo MELO3C019192.2 MADS-box transcription factor 23-like chr08 + View
Chenopodium quinoa AUR62026061 AGL15: Agamous-like MADS-box protein AGL15 C_Quinoa_Scaffold_3792 - View
Chenopodium quinoa AUR62024469 AGL15: Agamous-like MADS-box protein AGL15 C_Quinoa_Scaffold_2876 - View
Capsella rubella Carub.0005s2404 PTHR11945:SF147 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL16-RELATED scaffold_5 + View
Daucus carota DCAR_020500 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv43401 GWHABJS00000016 + View
Durio zibethinus Duzib128G0515 NW_019168481.1 + View
Durio zibethinus Duzib093G0336 NW_019167937.1 + View
Erigeron canadensis ECA247G0313 Conyza_canadensis_scaffold:7 + View
Eutrema salsugineum Thhalv10006251m.g PTHR11945:SF175 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL18 scaffold_19 - View
Gossypium hirsutum Gohir.A02G107301 PTHR11945//PTHR11945:SF175 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL18 A02 - View
Gossypium hirsutum Gohir.D03G069701 PTHR11945//PTHR11945:SF175 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL18 D03 - View
Glycine max Glyma.02G185500 PTHR11945//PTHR11945:SF175 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL18 Gm02 - View
Gossypium raimondii Gorai.003G090800 Chr03 + View
Lupinus albus Lalb_Chr21g0316521 PTHR11945:SF175 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL18 Lalb_Chr21 - View
Lotus japonicus Lj3g0025851 PTHR11945//PTHR11945:SF237 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED chr3 - View
Lotus japonicus Lj5g0007892 PTHR11945:SF175 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL18 chr5 + View
Lonicera japonica Lju124C44T12 GWHAAZE00000021 - View
Lactuca sativa Lsat_1_v5_gn_9_31261 Lsat_1_v8_lg_9 - View
Manihot esculenta Manes.09G019300 Chromosome09 + View
Medicago truncatula Medtr1g053070 MADS-box transcription factor chr1 + View
Nelumbo nucifera Nn2g15187 chr2 + View
Petunia axillaris Peaxi162Scf00130g00423 MADS-box transcription factor 27 Peaxi162Scf00130 - View
Petunia axillaris Peaxi162Scf00109g00139 MADS-box transcription factor 23 Peaxi162Scf00109 - View
Punica granatum PGR004G1335 NC_045131.1 - View
Prunus persica Prupe.7G055900 Pp07 + View
Papaver somniferum PSO339G5414 NC_039366.1 + View
Populus trichocarpa Potri.006G048700 PTHR11945//PTHR11945:SF175 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL18 Chr06 + View
Phaseolus vulgaris Phvul.005G035900 PTHR11945//PTHR11945:SF237 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Chr05 + View
Phaseolus vulgaris Phvul.007G251600 PTHR11945:SF175 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL18 Chr07 + View
Quercus lobata QL07p001582 7 - View
Rosa chinensis RcHm_v2.0_Chr3g0483031 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim07G0059200 chr07 - View
Striga asiatica SGA_v2.0_scaffold69G23122 scaffold69 - View
Salix brachista Sabra06G0034000 GWHAAZH00000006 + View
Sechium edule Sed0024257 LG14 + View
Solanum lycopersicum Solyc10g080030.2 MADS-box transcription factor (AHRD V3.3 *-* F1T116_9ERIC) SL4.0ch10 + View
Schrenkiella parvula Sp5g05210 PTHR11945:SF175 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL18 ch5-1 - View
Solanum pennellii Sopen04g008150 AGL15 (AGAMOUS-Like 15) is a member of the MADS domain family of regulatory factors. Although AGL15 is preferentially expressed during embryogenesis, AGL15 is also expressed in leaf primordia, shoot apical meristems and young floral buds, suggesting that AGL15 may play a role during post-germinative development. Transgenic plants that ectopically express AGL15 show delays in the transition to flowering, perianth abscission and senescence and fruit and seed maturation. Role in embryogenesis and gibberellic acid catabolism. Targets B3 domain transcription factors that are key regulators of embryogenesis. | AGAMOUS-like 15 (AGL15) | CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box , Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: AGAMOUS-like 18 Spenn-ch04 - View
Solanum pennellii Sopen10g030640 encodes a MADS-box containing protein likely to be a transcription factor that is expressed in endosperm and developing gametophytes. The protein sequence is most similar to that of AGL15, which is expressed in developing embryos. | AGAMOUS-like 18 (AGL18) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: AGAMOUS-like 15 Spenn-ch10 + View
Solanum tuberosum PGSC0003DMG400023729 MADS9 protein ST4.03ch10 - View
Trochodendron aralioides TAR633G2262 group2 - View
Trochodendron aralioides TAR636G0038 group1 + View
Theobroma cacao Thecc.05G150100 AGAMOUS-like 18 Chromosome_5 - View
Tarenaya hassleriana THA.LOC104804844 agamous-like MADS-box protein AGL18 NW_010960188.1 + View
Tarenaya hassleriana THA.LOC104824433 agamous-like MADS-box protein AGL18 isoform X1 NW_010966881.1 + View
Trifolium pratense TPR.G19672 Tp57577_TGAC_v2_scaf_323 - View
Tripterygium wilfordii TWI77G0779 NC_052236.1 + View
Tripterygium wilfordii TWI53G0011 NC_052244.1 + View
Vaccinium macrocarpon vmacro13702 Similar to AGL15: Agamous-like MADS-box protein AGL15 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G3184 CM024071.1 - View
Vitis vinifera GSVIVG01033253001 chr8 - View