Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0022919 PREDICTED: yrdC domain-containing protein, mitochondrial [Eucalyptus grandis] Contig279 - View
CSS0027878 PREDICTED: yrdC domain-containing protein, mitochondrial isoform X3 [Nicotiana sylvestris] Chr11 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G12570 LG-1 + View
Acer truncatum Atru.chr3.3636 chr3 - View
Actinidia chinensis Actinidia07134 Lachesis_group13 + View
Arabidopsis lyrata AL8G37180 scaffold_8 + View
Avicennia marina MSTRG.17807 ScioBoG_19834_HRSCAF_19925 - View
Arabidopsis thaliana AT5G60590 DHBP synthase RibB-like alpha/beta domain-containing protein DHBP synthase RibB-like alpha/beta domain%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945)%2C Sua5/YciO/YrdC%2C N-terminal (InterPro:IPR006070)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB08g36354 ChrB08 + View
Brassica napus A10p17780 A10 + View
Brassica napus C09p53290 C09 + View
Brassica oleracea BolC9t58203H C9 + View
Brassica rapa BraA10t43855Z A10 + View
Capsicum annuum CAN.G631.22 PGAv.1.6.scaffold631 + View
Cannabis sativa CANSAT54G0849 NC_044375.1 + View
Coffea canephora Cc01_g11180 Putative YrdC domain-containing protein, mitochondrial chr1 - View
Citrus clementina Ciclev10029204m.g scaffold_8 - View
Carpinus fangiana Cfa011322 Cfa04 - View
Cardamine hirsuta CARHR274250 tRNA threonylcarbamoyladenosine biosynthesis protein RimN Chr8 + View
Carya illinoinensis CiPaw.13G112500 KOG3051 - RNA binding/translational regulation protein of the SUA5 family Chr13 + View
Capsella rubella Carub.0008s2127 PTHR17490 - SUA5 scaffold_8 + View
Daucus carota DCAR_006058 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv32752 GWHABJS00000010 - View
Durio zibethinus Duzib168G0882 NW_019168159.1 - View
Erigeron canadensis ECA248G0132 Conyza_canadensis_scaffold:9 + View
Erythranthe guttata Migut.D02219 scaffold_4 + View
Eutrema salsugineum Thhalv10014329m.g PTHR17490 - SUA5 scaffold_2 - View
Fragaria x ananassa FAN16G0772 KOG3051 - RNA binding/translational regulation protein of the SUA5 family Fvb3-3 - View
Fragaria x ananassa FAN25G2211 KOG3051 - RNA binding/translational regulation protein of the SUA5 family Fvb3-1 + View
Fragaria x ananassa FAN11G0836 KOG3051 - RNA binding/translational regulation protein of the SUA5 family Fvb3-4 + View
Fragaria x ananassa FAN21G1816 KOG3051 - RNA binding/translational regulation protein of the SUA5 family Fvb3-2 - View
Fragaria vesca FvH4_3g32470 KOG3051 - RNA binding/translational regulation protein of the SUA5 family Fvb3 - View
Gossypium hirsutum Gohir.A13G230400 KOG3051 - RNA binding/translational regulation protein of the SUA5 family A13 + View
Glycine max Glyma.11G147000 KOG3051 - RNA binding/translational regulation protein of the SUA5 family Gm11 - View
Glycine max Glyma.12G067902 PTHR17490 - SUA5 Gm12 - View
Lupinus albus Lalb_Chr19g0137311 KOG3051 - RNA binding/translational regulation protein of the SUA5 family Lalb_Chr19 - View
Lotus japonicus Lj3g0003868 KOG3051 - RNA binding/translational regulation protein of the SUA5 family chr3 + View
Lonicera japonica Lj1A191G19 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_1_65361 Lsat_1_v8_lg_1 - View
Malus domestica MD11G1134900 DHBP synthase RibB-like alpha/beta domain Chr11 + View
Malus domestica MD03G1117100 DHBP synthase RibB-like alpha/beta domain Chr03 + View
Medicago truncatula Medtr4g459430 telomere recombination domain protein chr4 - View
Nelumbo nucifera Nn2g13092 chr2 + View
Nicotiana tabacum Nitab4.5_0000650g0230 YrdC-like domain, DHBP synthase RibB-like alpha/beta domain Nitab4.5_0000650 + View
Petunia axillaris Peaxi162Scf00270g00828 YrdC domain-containing protein, mitochondrial Peaxi162Scf00270 - View
Punica granatum PGR102G0162 NC_045129.1 + View
Prunus persica Prupe.6G100900 Pp06 + View
Papaver somniferum PSO063G6287 NC_039364.1 + View
Papaver somniferum PSO339G4039 NC_039366.1 - View
Phaseolus vulgaris Phvul.011G078800 Chr11 + View
Quercus lobata QL01p022329 1 - View
Rhododendron simsii Rhsim13G0094100 chr13 + View
Rhododendron simsii Rhsim01G0217400 chr01 - View
Salvia bowleyana SalBow3G2420 GWHASIU00000006 - View
Solanum lycopersicum Solyc11g069360.2 Threonylcarbamoyl-AMP synthase (AHRD V3.3 *** A0A2V5CV63_9RHIZ) SL4.0ch11 + View
Schrenkiella parvula Sp6g22160 KOG3051 - RNA binding/translational regulation protein of the SUA5 family ch6-6 + View
Solanum pennellii Sopen11g028080 DHBP synthase RibB-like alpha/beta domain | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Sua5/YciO/YrdC/YwlC , DHBP synthase RibB-like alpha/beta domain , Sua5/YciO/YrdC, N-terminal | BEST Arabidopsis thaliana protein match is: DHBP synthase RibB-like alpha/beta domain Spenn-ch11 + View
Solanum tuberosum PGSC0003DMG400008104 Protein SUA5 ST4.03ch11 + View
Trochodendron aralioides TAR623G1761 group7 - View
Trochodendron aralioides TAR633G2157 group2 - View
Theobroma cacao Thecc.09G339900 Chromosome_9 + View
Tarenaya hassleriana THA.LOC104799500 yrdC domain-containing protein%2C mitochondrial isoform X1 NW_010968505.1 + View
Trifolium pratense TPR.G15569 Tp57577_TGAC_v2_LG4 - View
Tripterygium wilfordii TWI79G0533 NC_052238.1 + View
Vaccinium macrocarpon vmacro03196 Similar to Yrdc: YrdC domain-containing protein, mitochondrial (Rattus norvegicus OX%3D10116) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1127G1456 CM024076.1 + View
Vitis vinifera GSVIVG01025180001 chr6 - View