Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0031082 unnamed protein product [Vitis vinifera] Chr5 - View
CSS0028637 bHLH transcription factor 1 [Camellia sinensis] Chr7 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr10.2107 chr10 + View
Acer truncatum Atru.chr6.3130 chr6 + View
Acer truncatum Atru.chr2.3184 chr2 + View
Actinidia chinensis Actinidia12492 Lachesis_group19 + View
Arabidopsis lyrata AL8G30130 scaffold_8 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.11KZZ9 PTHR23042//PTHR23042:SF56 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.7X0NJW PTHR23042//PTHR23042:SF67 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // TRANSCRIPTION FACTOR ILR3-RELATED arahy.Tifrunner.gnm1.Arahy.20 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AJV249 PTHR23042//PTHR23042:SF56 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.18 - View
Arabidopsis thaliana AT5G54680 basic helix-loop-helix (bHLH) DNA-binding superfamily protein iaa-leucine resistant3 (ILR3)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51070.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Brassica napus C09p45080 C09 + View
Capsicum annuum CAN.G1110.12 PGAv.1.6.scaffold1110 - View
Cannabis sativa CANSAT64G1330 NC_044379.1 - View
Cicer arietinum L. Ca_01570_v3 Ca_LG1_v3 + View
Cicer arietinum L. Ca_01758_v3 Ca_LG1_v3 - View
Corylus avellana Haze_09594 Similar to ILR3: Transcription factor ILR3 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc05_g13180 Transcription factor ILR3 chr5 + View
Citrus clementina Ciclev10016381m.g scaffold_2 + View
Citrus clementina Ciclev10009354m.g scaffold_1 + View
Carpinus fangiana Cfa020434 Cfa08 - View
Cardamine hirsuta CARHR267990 BHLH transcription factor 1 Chr8 + View
Carya illinoinensis CiPaw.03G163600 PTHR23042//PTHR23042:SF56//PTHR23042:SF67 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // SUBFAMILY NOT NAMED // TRANSCRIPTION FACTOR ILR3-RELATED Chr03 - View
Carya illinoinensis CiPaw.12G126000 PTHR23042//PTHR23042:SF67 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // TRANSCRIPTION FACTOR ILR3-RELATED Chr12 + View
Carya illinoinensis CiPaw.11G183100 PTHR23042//PTHR23042:SF67 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // TRANSCRIPTION FACTOR ILR3-RELATED Chr11 + View
Citrullus lanatus ClCG02G008370 BHLH transcription factor 1 CG_Chr02 + View
Citrullus lanatus ClCG05G014800 BHLH transcription factor 1 CG_Chr05 - View
Cucumis melo MELO3C019226.2 transcription factor ILR3-like chr11 + View
Carica papaya Cpa.g.sc97.78 supercontig_97 - View
Chenopodium quinoa AUR62029235 ILR3: Transcription factor ILR3 C_Quinoa_Scaffold_2939 - View
Chenopodium quinoa AUR62012588 ILR3: Transcription factor ILR3 C_Quinoa_Scaffold_2715 + View
Capsella rubella Carub.0008s1494 PTHR23042//PTHR23042:SF67 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // TRANSCRIPTION FACTOR ILR3-RELATED scaffold_8 + View
Cucumis sativus L. CsaV3_2G035250 transcription factor ILR3-like chr2 - View
Daucus carota DCAR_019207 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_010015 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_021193 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv18538 GWHABJS00000013 - View
Davidia involucrata Dinv22312 GWHABJS00000001 + View
Davidia involucrata Dinv10910 GWHABJS00000001 + View
Davidia involucrata Dinv18924 GWHABJS00000020 + View
Davidia involucrata Dinv17846 GWHABJS00000016 + View
Durio zibethinus Duzib213G0055 NW_019167993.1 - View
Durio zibethinus Duzib235G0873 NW_019167982.1 + View
Erigeron canadensis ECA233G3115 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.F03420 Chr06 + View
Erythranthe guttata Migut.M01814 scaffold_13 - View
Fragaria x ananassa FAN25G1929 PTHR23042//PTHR23042:SF67 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // TRANSCRIPTION FACTOR ILR3-RELATED Fvb3-1 - View
Fragaria x ananassa FAN25G2588 PTHR23042//PTHR23042:SF67 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // TRANSCRIPTION FACTOR ILR3-RELATED Fvb3-1 + View
Fragaria vesca FvH4_3g02910 PTHR23042//PTHR23042:SF67 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // TRANSCRIPTION FACTOR ILR3-RELATED Fvb3 - View
Gossypium hirsutum Gohir.A13G141600 PTHR23042//PTHR23042:SF67 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // TRANSCRIPTION FACTOR ILR3-RELATED A13 - View
Gossypium hirsutum Gohir.D13G146300 PTHR23042//PTHR23042:SF67 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // TRANSCRIPTION FACTOR ILR3-RELATED D13 - View
Glycine max Glyma.13G305500 PTHR23042//PTHR23042:SF56 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // SUBFAMILY NOT NAMED Gm13 + View
Glycine max Glyma.12G136300 PTHR23042//PTHR23042:SF67 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // TRANSCRIPTION FACTOR ILR3-RELATED Gm12 - View
Glycine max Glyma.13G251300 PTHR23042//PTHR23042:SF67 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // TRANSCRIPTION FACTOR ILR3-RELATED Gm13 + View
Glycine max Glyma.12G196700 PTHR23042//PTHR23042:SF56 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // SUBFAMILY NOT NAMED Gm12 - View
Gossypium raimondii Gorai.013G164100 Chr13 - View
Hydrangea macrophylla Hma1.2p1_0613F.1_g189340 Hma1.2p1_0613F.1 - View
Lotus japonicus Lj3g0024962 PTHR23042//PTHR23042:SF56 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // SUBFAMILY NOT NAMED chr3 + View
Lonicera japonica Lj1A755T26 GWHAAZE00000001 + View
Lonicera japonica Lj1A863G59 GWHAAZE00000001 + View
Malus domestica MD10G1312000 Chr10 + View
Malus domestica MD11G1227800 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr11 - View
Manihot esculenta Manes.16G017300 Chromosome16 - View
Manihot esculenta Manes.03G122100 Chromosome03 + View
Manihot esculenta Manes.15G077000 Chromosome15 - View
Medicago truncatula Medtr2g082640 BHLH domain class transcription factor chr2 + View
Medicago truncatula Medtr2g089000 BHLH domain class transcription factor chr2 - View
Nelumbo nucifera Nn1g03709 chr1 - View
Nelumbo nucifera Nn1g06963 chr1 + View
Nicotiana tabacum Nitab4.5_0002229g0100 Myc-type, basic helix-loop-helix (bHLH) domain Nitab4.5_0002229 + View
Nicotiana tabacum Nitab4.5_0002342g0110 Myc-type, basic helix-loop-helix (bHLH) domain Nitab4.5_0002342 - View
Olea europaea Oeu011077.2 chr19 + View
Olea europaea Oeu062621.1 chr7 + View
Petunia axillaris Peaxi162Scf00007g01347 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Peaxi162Scf00007 - View
Punica granatum PGR142G3074 NC_045128.1 + View
Prunus persica Prupe.4G029000 PTHR23042:SF67 - TRANSCRIPTION FACTOR ILR3-RELATED Pp04 - View
Pisum sativum Psat5g249760 Helix-loop-helix DNA-binding domain chr5LG3 + View
Papaver somniferum PSO675G1528 NC_039358.1 - View
Papaver somniferum PSO541G6507 NC_039363.1 + View
Papaver somniferum PSO832G2067 NC_039367.1 + View
Populus trichocarpa Potri.011G132400 PTHR23042//PTHR23042:SF67 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // TRANSCRIPTION FACTOR ILR3-RELATED Chr11 + View
Populus trichocarpa Potri.004G031800 PTHR23042//PTHR23042:SF67 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // TRANSCRIPTION FACTOR ILR3-RELATED Chr04 + View
Populus trichocarpa Potri.001G416600 PTHR23042//PTHR23042:SF67 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // TRANSCRIPTION FACTOR ILR3-RELATED Chr01 + View
Phaseolus vulgaris Phvul.005G112500 PTHR23042//PTHR23042:SF56 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // SUBFAMILY NOT NAMED Chr05 + View
Quercus lobata QL08p013457 8 - View
Quercus lobata QL08p033978 8 - View
Rosa chinensis RcHm_v2.0_Chr5g0004471 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim06G0156800 chr06 + View
Rhododendron simsii Rhsim04G0057000 chr04 - View
Salix brachista Sabra16G0283200 GWHAAZH00000016 + View
Salix brachista Sabra11G0119200 GWHAAZH00000011 + View
Salix brachista Sabra11G0024400 GWHAAZH00000011 - View
Simmondsia chinensis Sc16g0006560 GWHAASQ00000016 - View
Sechium edule Sed0003408 LG05 - View
Solanum lycopersicum Solyc07g064040.3 bHLH transcription factor143 SL4.0ch07 + View
Solanum lycopersicum Solyc07g052670.3 bHLH transcription factor 053 SL4.0ch07 - View
Solanum pennellii Sopen07g026270 iaa-leucine resistant3 (ILR3) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein Spenn-ch07 - View
Solanum pennellii Sopen07g032180 iaa-leucine resistant3 (ILR3) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein Spenn-ch07 + View
Solanum pennellii Sopen02g024720 iaa-leucine resistant3 (ILR3) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400019263 Basic helix-loop-helix protein ST4.03ch07 + View
Solanum tuberosum PGSC0003DMG400021717 DNA binding protein ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400026168 DNA binding protein ST4.03ch07 - View
Selenicereus undatus Hund02140 Scaffold_33678 - View
Trochodendron aralioides TAR629G1325 group0 - View
Trochodendron aralioides TAR624G1103 group9 + View
Trochodendron aralioides TAR627G0771 group6 + View
Theobroma cacao Thecc.02G163000 Basic helix-loop-helix DNA-binding superfamily protein Chromosome_2 - View
Theobroma cacao Thecc.07G054900 DNA binding protein Chromosome_7 - View
Theobroma cacao Thecc.06G208800 Basic helix-loop-helix DNA-binding superfamily protein Chromosome_6 + View
Trifolium pratense TPR.G30800 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI38G1309 NC_052252.1 + View
Tripterygium wilfordii TWI39G0997 NC_052250.1 - View
Tripterygium wilfordii TWI38G0644 NC_052252.1 + View
Tripterygium wilfordii TWI18G1031 NC_052241.1 - View
Vaccinium macrocarpon vmacro12237 Similar to ILR3: Transcription factor ILR3 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro09322 Similar to ILR3: Transcription factor ILR3 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro11770 Similar to ILR3: Transcription factor ILR3 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1080G1665 CM024079.1 - View
Vitis vinifera GSVIVG01014589001 chr19 + View
Vitis vinifera GSVIVG01030640001 chr12 - View
Zea mays Zm00001eb323440 Zm00001e035178 BHLH transcription factor Transcription factor ILR3 7 - View