Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0008569 PREDICTED: cyclic nucleotide-gated ion channel 1 [Sesamum indicum] Chr1 + View
CSS0049294 Cyclic nucleotide gated channel 1 isoform 3 [Theobroma cacao] Chr6 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G9340 LG-3 + View
Acer truncatum Atru.chr1.200 chr1 - View
Acer truncatum Atru.chr5.657 chr5 + View
Actinidia chinensis Actinidia03162 Lachesis_group3 + View
Actinidia chinensis Actinidia20229 Lachesis_group6 + View
Actinidia chinensis Actinidia06161 Lachesis_group21 + View
Arabidopsis lyrata AL8G27780 scaffold_8 - View
Avicennia marina MSTRG.27042 ScioBoG_8578_HRSCAF_8617 - View
Avicennia marina MSTRG.56 ScioBoG_102831_HRSCAF_103044 - View
Aquilegia oxysepala Aqoxy7G00119 CHR07 - View
Aquilegia oxysepala Aqoxy5G04210 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5G1Q9A PTHR10217//PTHR10217:SF465 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 11-RELATED arahy.Tifrunner.gnm1.Arahy.06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.X81CAV PTHR10217//PTHR10217:SF527 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 arahy.Tifrunner.gnm1.Arahy.06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8A5B5C PTHR10217//PTHR10217:SF527 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.9T83YI PTHR10217//PTHR10217:SF527 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 arahy.Tifrunner.gnm1.Arahy.17 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.H47VCY PTHR10217//PTHR10217:SF527 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT5G53130 cyclic nucleotide gated channel 1 member of Cyclic nucleotide gated channel family cyclic nucleotide gated channel 1 (CNGC1)%3B FUNCTIONS IN: inward rectifier potassium channel activity%2C cyclic nucleotide binding%2C intracellular cyclic nucleotide activated cation channel activity%2C calmodulin binding%2C cation channel activity%3B INVOLVED IN: potassium ion transport%2C calcium ion transport%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595)%2C Ion transport (InterPro:IPR005821)%2C Cyclic nucleotide-binding-like (InterPro:IPR018490)%2C RmlC-like jelly roll fold (InterPro:IPR014710)%3B BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 13 (TAIR:AT4G01010.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB08g35672 ChrB08 - View
Brassica carinata BcaB05g22014 ChrB05 - View
Brassica carinata BcaC03g14452 ChrC03 + View
Brassica carinata BcaC04g20502 ChrC04 + View
Brassica napus C02p18630 C02 + View
Brassica napus A10p10630 A10 - View
Brassica napus C09p42830 C09 - View
Brassica napus A02p11270 A02 + View
Brassica oleracea BolC2t08008H C2 + View
Brassica rapa BraA02t06189Z A02 + View
Brassica rapa BraA10t43144Z A10 - View
Beta vulgaris EL10Ac3g05329 PTHR10217//PTHR10217:SF527 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 Chr3_EL10_PGA_scaffold7 - View
Capsicum annuum CAN.G986.16 PGAv.1.6.scaffold986 + View
Capsicum annuum CAN.G108.43 PGAv.1.6.scaffold108 + View
Cannabis sativa CANSAT21G1456 NC_044374.1 + View
Cicer arietinum L. Ca_16688_v3 Ca_LG5_v3 + View
Cicer arietinum L. Ca_12691_v3 Ca_LG4_v3 + View
Corylus avellana Haze_15647 Similar to CNGC10: Probable cyclic nucleotide-gated ion channel 10 (Arabidopsis thaliana OX%3D3702) 11 + View
Corylus avellana Haze_00127 Similar to CNGC1: Cyclic nucleotide-gated ion channel 1 (Arabidopsis thaliana OX%3D3702) 1 + View
Coffea canephora Cc02_g01760 Cyclic nucleotide-gated ion channel 1 chr2 - View
Citrus clementina Ciclev10006820m.g scaffold_9 - View
Citrus clementina Ciclev10019048m.g scaffold_3 - View
Carpinus fangiana Cfa003808 Cfa01 - View
Cardamine hirsuta CARHR266160 cyclic nucleotide gated channel 1 Chr8 - View
Carya illinoinensis CiPaw.02G040100 PTHR10217:SF465 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 11-RELATED Chr02 + View
Carya illinoinensis CiPaw.05G256100 PTHR10217//PTHR10217:SF465 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 11-RELATED Chr05 - View
Carya illinoinensis CiPaw.06G008500 K05391 - cyclic nucleotide gated channel, other eukaryote (CNGF) Chr06 + View
Citrullus lanatus ClCG01G000510 Cyclic nucleotide-gated channel C family protein CG_Chr01 - View
Citrullus lanatus ClCG05G000870 cyclic nucleotide gated channel 10 LENGTH=711 CG_Chr05 - View
Citrullus lanatus ClCG05G008780 Cyclic nucleotide-gated channel C family protein CG_Chr05 + View
Cucumis melo MELO3C006028.2 cyclic nucleotide-gated ion channel 1 chr06 - View
Cucumis melo MELO3C005876.2 cyclic nucleotide-gated ion channel 1 chr09 + View
Carica papaya Cpa.g.sc3.60 supercontig_3 + View
Chenopodium quinoa AUR62006134 CNGC1: Cyclic nucleotide-gated ion channel 1 C_Quinoa_Scaffold_1001 - View
Chenopodium quinoa AUR62023474 CNGC1: Cyclic nucleotide-gated ion channel 1 C_Quinoa_Scaffold_1606 - View
Chenopodium quinoa AUR62019355 CNGC1: Cyclic nucleotide-gated ion channel 1 C_Quinoa_Scaffold_3107 + View
Capsella rubella Carub.0008s1333 PTHR10217//PTHR10217:SF527 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 scaffold_8 - View
Cucumis sativus L. CsaV3_5G000590 cyclic nucleotide-gated ion channel 1 chr5 - View
Daucus carota DCAR_020310 hypothetical protein DCARv2_Chr6 - View
Daucus carota DCAR_010608 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv05477 GWHABJS00000543 + View
Davidia involucrata Dinv35317 GWHABJS00000009 - View
Davidia involucrata Dinv32576 GWHABJS00000020 + View
Durio zibethinus Duzib068G0513 NW_019167838.1 - View
Durio zibethinus Duzib133G0779 NW_019167938.1 + View
Durio zibethinus Duzib205G1755 NW_019168381.1 + View
Durio zibethinus Duzib138G0035 NW_019167893.1 + View
Durio zibethinus Duzib084G1220 NW_019167827.1 - View
Erigeron canadensis ECA238G0399 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.A01488 Chr01 + View
Erythranthe guttata Migut.F00233 scaffold_6 - View
Erythranthe guttata Migut.F01041 scaffold_6 - View
Eutrema salsugineum Thhalv10012801m.g PTHR10217:SF527 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 scaffold_2 + View
Fragaria x ananassa FAN10G2315 K05391 - cyclic nucleotide gated channel, other eukaryote (CNGF) Fvb7-1 + View
Fragaria x ananassa FAN03G1795 Fvb7-3 - View
Fragaria x ananassa FAN03G2068 PTHR10217:SF465 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 11-RELATED Fvb7-3 - View
Fragaria x ananassa FAN04G1083 PTHR10217//PTHR10217:SF465 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 11-RELATED Fvb5-4 + View
Fragaria x ananassa FAN06G4851 KOG0498 - K+-channel ERG and related proteins, contain PAS/PAC sensor domain Fvb7-2 - View
Fragaria x ananassa FAN06G2875 K05391 - cyclic nucleotide gated channel, other eukaryote (CNGF) Fvb7-2 + View
Fragaria x ananassa FAN01G1167 PF00076//PF00520 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Ion transport protein (Ion_trans) Fvb7-4 - View
Fragaria x ananassa FAN10G3231 K05391 - cyclic nucleotide gated channel, other eukaryote (CNGF) Fvb7-1 + View
Fragaria vesca FvH4_7g31200 K05391 - cyclic nucleotide gated channel, other eukaryote (CNGF) Fvb7 + View
Gossypium hirsutum Gohir.D08G107700 PTHR10217//PTHR10217:SF527 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 D08 - View
Gossypium hirsutum Gohir.D04G002500 PTHR10217//PTHR10217:SF527 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 D04 - View
Gossypium hirsutum Gohir.A05G413600 PTHR10217//PTHR10217:SF527 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 A05 + View
Glycine max Glyma.04G237400 PTHR10217//PTHR10217:SF527 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 Gm04 - View
Glycine max Glyma.14G161600 PTHR10217//PTHR10217:SF527 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 Gm14 + View
Glycine max Glyma.06G126600 PTHR10217//PTHR10217:SF527 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 Gm06 + View
Gossypium raimondii Gorai.004G115300 Chr04 - View
Gossypium raimondii Gorai.012G003500 Chr12 - View
Helianthus annuus HanXRQChr14g0462931 Putative potassium channel, voltage-dependent, EAG HanXRQChr14 + View
Hydrangea macrophylla Hma1.2p1_0327F.1_g126780 Hma1.2p1_0327F.1 + View
Lupinus albus Lalb_Chr11g0066691 PTHR10217:SF527 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 Lalb_Chr11 + View
Lotus japonicus Lj1g0018172 PTHR10217//PTHR10217:SF527 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 chr1 - View
Lonicera japonica Lj3A908T62 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_2_135880 PTHR10217:SF527 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 Lsat_1_v8_lg_2 + View
Magnolia biondii MBI06_g05049_MAGBIO AED:0.16 Chr06 + View
Magnolia biondii MBI07_g38454_MAGBIO AED:0.13 Chr07 + View
Malus domestica MD07G1291200 cyclic nucleotide gated channel 1 Chr07 - View
Malus domestica MD01G1079600 cyclic nucleotide gated channel 1 Chr01 + View
Malus domestica MD01G1216700 cyclic nucleotide gated channel 1 Chr01 - View
Malus domestica MD07G1286700 cyclic nucleotide gated channel 1 Chr07 + View
Manihot esculenta Manes.06G158600 Chromosome06 + View
Manihot esculenta Manes.14G007516 Chromosome14 - View
Medicago truncatula Medtr3g091080 cyclic nucleotide-gated ion channel-like protein chr3 + View
Medicago truncatula Medtr1g028370 cyclic nucleotide-gated ion channel-like protein chr1 - View
Nelumbo nucifera Nn3g19024 chr3 - View
Olea europaea Oeu041339.1 chr1 - View
Oryza sativa ssp. japonica Os02g0255000 Similar to Cyclic nucleotide-gated ion channel 1. Similar to cyclic nucleotide-gated ion channel 1. chr02 - View
Petunia axillaris Peaxi162Scf00904g00008 cyclic nucleotide gated channel 1 Peaxi162Scf00904 - View
Punica granatum PGR042G0895 NC_045130.1 - View
Prunus persica Prupe.2G308700 Pp02 + View
Prunus persica Prupe.2G186700 K05391 - cyclic nucleotide gated channel, other eukaryote (CNGF) Pp02 + View
Prunus persica Prupe.2G312500 Pp02 - View
Papaver somniferum PSO135G0503 NW_020631041.1 + View
Papaver somniferum PSO384G0611 NC_039368.1 - View
Populus trichocarpa Potri.015G019100 PTHR10217//PTHR10217:SF527 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 Chr15 - View
Populus trichocarpa Potri.014G097900 PTHR10217//PTHR10217:SF527 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 Chr14 + View
Populus trichocarpa Potri.002G170000 PTHR10217//PTHR10217:SF527 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 Chr02 + View
Populus trichocarpa Potri.012G002200 PTHR10217//PTHR10217:SF527 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 Chr12 + View
Phaseolus vulgaris Phvul.006G112200 PTHR10217:SF465 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 11-RELATED Chr06 + View
Phaseolus vulgaris Phvul.009G054700 PTHR10217:SF527 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 Chr09 + View
Quercus lobata QL09p010261 9 - View
Rosa chinensis RcHm_v2.0_Chr1g0380261 RcHm_v2.0_Chr1 + View
Rosa chinensis RcHm_v2.0_Chr1g0381061 RcHm_v2.0_Chr1 - View
Rhododendron simsii Rhsim03G0200700 chr03 + View
Rhododendron simsii Rhsim09G0204600 chr09 + View
Striga asiatica SGA_v2.0_scaffold192G40567 scaffold192 - View
Salvia bowleyana SalBow4G0127 GWHASIU00000008 + View
Salvia bowleyana SalBow2G1417 GWHASIU00000007 - View
Salix brachista Sabra15G0014500 GWHAAZH00000015 - View
Salix brachista Sabra02G0142300 GWHAAZH00000002 - View
Salix brachista Sabra12G0019000 GWHAAZH00000012 - View
Salix brachista Sabra14G0071700 GWHAAZH00000014 + View
Simmondsia chinensis Sc23g0002140 GWHAASQ00000023 - View
Simmondsia chinensis Sc13g0009680 GWHAASQ00000013 + View
Sechium edule Sed0018615 LG13 - View
Sechium edule Sed0014467 LG05 - View
Sechium edule Sed0019004 LG01 - View
Sechium edule Sed0023312 LG02 + View
Sechium edule Sed0009183 LG07 + View
Solanum lycopersicum Solyc03g007250.1 Cyclic nucleotide gated channel 1 (AHRD V3.3 *-* A0A2U1KHS4_ARTAN) SL4.0ch03 - View
Solanum lycopersicum Solyc01g095770.3 Cyclic nucleotide-gated channel 7 (AHRD V3.3 *** A0A2U8YLK9_TOBAC) SL4.0ch01 - View
Schrenkiella parvula Sp6g15310 PTHR10217:SF527 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 ch6-6 - View
Solanum pennellii Sopen03g003230 member of Cyclic nucleotide gated channel family | cyclic nucleotide gated channel 1 (CNGC1) | FUNCTIONS IN: inward rectifier potassium channel activity, cyclic nucleotide binding, intracellular cyclic nucleotide activated cation channel activity, calmodulin binding, cation channel activity | INVOLVED IN: potassium ion transport, calcium ion transport | LOCATED IN: plasma membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding , Ion transport , Cyclic nucleotide-binding-like , RmlC-like jelly roll fold | BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 13 Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400009076 Cyclic nucleotide-gated calmodulin-binding ion channel ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG400019612 Cyclic nucleotide-gated calmodulin-binding ion channel ST4.03ch06 + View
Selenicereus undatus Hund16706 Scaffold_33675 + View
Selenicereus undatus Hund11678 Scaffold_33679 - View
Trochodendron aralioides TAR629G2264 group0 + View
Trochodendron aralioides TAR374G1077 group12 + View
Trochodendron aralioides TAR636G2645 group1 - View
Theobroma cacao Thecc.03G194400 Cyclic nucleotide gated channel 1 Chromosome_3 + View
Tarenaya hassleriana THA.LOC104825136 cyclic nucleotide-gated ion channel 1 NW_010966986.1 + View
Tarenaya hassleriana THA.LOC104811926 cyclic nucleotide-gated ion channel 1-like isoform X1 NW_010965372.1 - View
Trifolium pratense TPR.G17301 Tp57577_TGAC_v2_LG2 + View
Trifolium pratense TPR.G33312 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI23G1147 NC_052239.1 - View
Tripterygium wilfordii TWI39G0574 NC_052250.1 + View
Vaccinium macrocarpon vmacro10113 Similar to CNGC1: Cyclic nucleotide-gated ion channel 1 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro06554 Similar to CNGC13: Putative cyclic nucleotide-gated ion channel 13 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G3115 CM024072.1 + View
Vitis vinifera GSVIVG01028711001 chr16 - View
Vitis vinifera GSVIVG01027087001 chr15 - View
Zea mays Zm00001eb204230 Zm00001e024846 Cyclic nucleotide-gated ion channel 1 isoform 1%3B Cyclic nucleotide-gated ion channel 1 isoform 2 4 + View