Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0006572 PREDICTED: probable calcium-binding protein CML18 [Nicotiana tomentosiformis] Chr2 + View
CSS0002278 PREDICTED: calcium-binding allergen Ole e 8-like [Solanum tuberosum] Chr15 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G3080 LG-2 - View
Aethionema arabicum Aa31LG7G2860 LG-7 + View
Aethionema arabicum Aa31LG7G9410 LG-7 - View
Acer truncatum Atru.chr9.1744 chr9 + View
Arabidopsis lyrata AL2G33410 scaffold_2 + View
Arabidopsis lyrata AL1G40290 scaffold_1 + View
Avicennia marina MSTRG.4573 ScioBoG_102837_HRSCAF_103074 + View
Aquilegia oxysepala Aqoxy3G00094 CHR03 - View
Arabidopsis thaliana AT1G73630 EF hand calcium-binding protein family EF hand calcium-binding protein family%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cytoplasm%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C EF-HAND 2 (InterPro:IPR018249)%2C EF-hand-like domain (InterPro:IPR011992)%2C Calcium-binding EF-hand (InterPro:IPR002048)%2C EF-hand (InterPro:IPR018248)%3B BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G18210.2)%3B Has 22917 Blast hits to 14772 proteins in 1512 species: Archae - 2%3B Bacteria - 123%3B Metazoa - 7738%3B Fungi - 5792%3B Plants - 5797%3B Viruses - 0%3B Other Eukaryotes - 3465 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G18210 Calcium-binding EF-hand family protein Calcium-binding EF-hand family protein%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%2C vacuole%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C EF-HAND 2 (InterPro:IPR018249)%2C EF-hand-like domain (InterPro:IPR011992)%2C Calcium-binding EF-hand (InterPro:IPR002048)%2C EF-hand (InterPro:IPR018248)%3B BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT1G73630.1)%3B Has 26408 Blast hits to 16156 proteins in 1551 species: Archae - 2%3B Bacteria - 177%3B Metazoa - 9876%3B Fungi - 6429%3B Plants - 6014%3B Viruses - 0%3B Other Eukaryotes - 3910 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G24620 EF hand calcium-binding protein family Encodes a EF-hand calcium-binding protein family member. Mutants exhibit longer root hairs under phosphate-deficient conditions. EF hand calcium-binding protein family%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: response to cold%3B LOCATED IN: nucleus%2C cytoplasm%3B EXPRESSED IN: 7 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C EF-HAND 2 (InterPro:IPR018249)%2C EF-hand-like domain (InterPro:IPR011992)%2C Calcium-binding EF-hand (InterPro:IPR002048)%2C EF-hand (InterPro:IPR018248)%3B BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G18210.2)%3B Has 28159 Blast hits to 18576 proteins in 1591 species: Archae - 2%3B Bacteria - 225%3B Metazoa - 10723%3B Fungi - 6999%3B Plants - 5954%3B Viruses - 2%3B Other Eukaryotes - 4254 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC01g01660 ChrC01 - View
Brassica carinata BcaC08g46783 ChrC08 + View
Brassica carinata BcaC05g25716 ChrC05 - View
Brassica napus C08p18480 C08 - View
Brassica napus A08p30490 A08 + View
Brassica napus C06p47750 C06 + View
Brassica napus A06p14250 A06 - View
Brassica napus A08p26720 A08 - View
Brassica oleracea BolC8t49480H C8 - View
Brassica rapa BraA06t24554Z A06 - View
Brassica rapa BraA08t34618Z A08 - View
Brassica rapa BraA08t34981Z A08 + View
Capsicum annuum CAN.G1129.52 PGAv.1.6.scaffold1129 - View
Cicer arietinum L. Ca_17196_v3 Ca_LG6_v3 + View
Coffea canephora Cc04_g06360 Calcium-binding allergen Ole e 8 chr4 + View
Carpinus fangiana Cfa019671 Cfa08 + View
Cardamine hirsuta CARHR066680 Calmodulin 24-like protein Chr2 + View
Cardamine hirsuta CARHR038430 Calmodulin-like protein Chr1 - View
Cucumis melo MELO3C017353.2 Calcium binding protein chr02 + View
Capsella rubella Carub.0001s2547 PTHR10891:SF605 - CALCIUM-BINDING PROTEIN CML25-RELATED scaffold_1 + View
Capsella rubella Carub.0002s2037 PTHR10891:SF573 - CALCIUM-BINDING PROTEIN CML24-RELATED scaffold_2 + View
Daucus carota DCAR_010743 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv26572 GWHABJS00000019 + View
Erigeron canadensis ECA233G5210 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.J01551 Chr10 + View
Eutrema salsugineum Thhalv10008945m.g scaffold_5 + View
Fragaria vesca FvH4_5g17240 PTHR10891//PTHR10891:SF605 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALCIUM-BINDING PROTEIN CML25-RELATED Fvb5 - View
Gossypium hirsutum Gohir.D12G269301 PTHR10891:SF573 - CALCIUM-BINDING PROTEIN CML24-RELATED D12 - View
Gossypium hirsutum Gohir.A12G268900 PTHR10891:SF573 - CALCIUM-BINDING PROTEIN CML24-RELATED A12 - View
Glycine max Glyma.05G245600 PTHR10891:SF573 - CALCIUM-BINDING PROTEIN CML24-RELATED Gm05 - View
Glycine max Glyma.07G101100 PTHR10891//PTHR10891:SF608 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Gm07 + View
Gossypium raimondii Gorai.008G289600 Chr08 - View
Hydrangea macrophylla Hma1.2p1_0669F.1_g200160 Hma1.2p1_0669F.1 + View
Lupinus albus Lalb_Chr09g0330421 PTHR10891//PTHR10891:SF573 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALCIUM-BINDING PROTEIN CML24-RELATED Lalb_Chr09 + View
Lonicera japonica Lj9P420T29 GWHAAZE00000009 + View
Lonicera japonica Lj2P434T29 GWHAAZE00000002 - View
Manihot esculenta Manes.06G007600 Chromosome06 + View
Medicago truncatula Medtr6g079570 EF hand calcium-binding family protein chr6 - View
Punica granatum PGR004G2686 NC_045131.1 - View
Punica granatum PGR044G0209 NC_045134.1 + View
Papaver somniferum PSO017G4321 NC_039362.1 - View
Phaseolus vulgaris Phvul.004G151525 PTHR10891//PTHR10891:SF608 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr04 - View
Phaseolus vulgaris Phvul.002G329300 PTHR10891//PTHR10891:SF608 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr02 - View
Quercus lobata QL10p028410 10 - View
Rhododendron simsii Rhsim12G0138800 chr12 - View
Simmondsia chinensis Sc10g0009270 GWHAASQ00000010 + View
Simmondsia chinensis Sc11g0008690 GWHAASQ00000011 + View
Sechium edule Sed0000275 LG12 - View
Schrenkiella parvula Sp1g23150 PTHR10891//PTHR10891:SF605 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALCIUM-BINDING PROTEIN CML25-RELATED ch1-1 + View
Schrenkiella parvula Sp1g16200 PTHR10891:SF573 - CALCIUM-BINDING PROTEIN CML24-RELATED ch1-1 - View
Solanum tuberosum PGSC0003DMG400028797 Calcium-binding allergen Ole e 8 ST4.03ch06 + View
Solanum tuberosum PGSC0003DMG400005745 Calcium-binding allergen Ole e 8 ST4.03ch03 + View
Theobroma cacao Thecc.03G053900 Chromosome_3 - View
Tarenaya hassleriana THA.LOC104812167 probable calcium-binding protein CML27 NW_010965372.1 - View
Tripterygium wilfordii TWI15G1116 NC_052247.1 - View
Vigna mungo VMungo0464G2017 CM024077.1 - View
Vigna mungo VMungo0251G3734 CM024069.1 - View
Vitis vinifera GSVIVG01008421001 chr17 + View