Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CSS0027107 | unnamed protein product [Coffea canephora] | Chr12 | - | View |
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Acer truncatum | Atru.chr5.36 | chr5 | - | View | |
Actinidia chinensis | Actinidia05793 | Lachesis_group20 | + | View | |
Actinidia chinensis | Actinidia30958 | Lachesis_group0 | + | View | |
Avicennia marina | MSTRG.20660 | ScioBoG_26180_HRSCAF_26306 | - | View | |
Avicennia marina | MSTRG.28129 | ScioBoG_94932_HRSCAF_95134 | - | View | |
Avicennia marina | MSTRG.4965 | ScioBoG_102838_HRSCAF_103081 | + | View | |
Aquilegia oxysepala | Aqoxy3G02541 | CHR03 | - | View | |
Beta vulgaris | EL10Ac1g00708 | PTHR11566:SF80 - DYNAMIN-RELATED PROTEIN 1C | Chr1_EL10_PGA_scaffold3 | + | View |
Cannabis sativa | CANSAT25G2662 | NC_044370.1 | + | View | |
Corylus avellana | Haze_02913 | Similar to DRP1E: Dynamin-related protein 1E (Arabidopsis thaliana OX%3D3702) | 1 | + | View |
Corylus avellana | Haze_08311 | Similar to DRP1E: Dynamin-related protein 1E (Arabidopsis thaliana OX%3D3702) | 4 | - | View |
Coffea canephora | Cc02_g25720 | Dynamin-related protein 1E | chr2 | + | View |
Citrus clementina | Ciclev10019323m.g | scaffold_3 | + | View | |
Carpinus fangiana | Cfa022160 | scaffold10 | + | View | |
Carya illinoinensis | CiPaw.14G015300 | PTHR11566//PTHR11566:SF77 - DYNAMIN // SUBFAMILY NOT NAMED | Chr14 | + | View |
Carya illinoinensis | CiPaw.13G021000 | K01528 - dynamin GTPase (DNM) | Chr13 | + | View |
Citrullus lanatus | ClCG05G002830 | Dynamin, putative | CG_Chr05 | - | View |
Cucumis melo | MELO3C006260.2 | Dynamin, putative | chr06 | - | View |
Chenopodium quinoa | AUR62013798 | DRP1E: Dynamin-related protein 1E | C_Quinoa_Scaffold_1412 | - | View |
Chenopodium quinoa | AUR62023360 | DRP1E: Dynamin-related protein 1E | C_Quinoa_Scaffold_1352 | + | View |
Cucumis sativus L. | CsaV3_3G010360 | Dynamin, putative | chr3 | - | View |
Cucumis sativus L. | CsaV3_4G014740 | dynamin-related protein 3A-like | chr4 | + | View |
Daucus carota | DCAR_008303 | hypothetical protein | DCARv2_Chr2 | - | View |
Daucus carota | DCAR_015775 | hypothetical protein | DCARv2_Chr4 | + | View |
Davidia involucrata | Dinv44012 | GWHABJS00000020 | - | View | |
Davidia involucrata | Dinv43583 | GWHABJS00000016 | - | View | |
Durio zibethinus | Duzib128G0776 | NW_019168481.1 | - | View | |
Erigeron canadensis | ECA236G1449 | Conyza_canadensis_scaffold:3 | + | View | |
Erigeron canadensis | ECA248G2374 | Conyza_canadensis_scaffold:9 | - | View | |
Eucalyptus grandis | Eucgr.D01169 | Chr04 | - | View | |
Erythranthe guttata | Migut.B01478 | scaffold_2 | - | View | |
Erythranthe guttata | Migut.N01710 | scaffold_14 | - | View | |
Fragaria x ananassa | FAN10G3282 | PTHR11566//PTHR11566:SF80 - DYNAMIN // DYNAMIN-RELATED PROTEIN 1C | Fvb7-1 | - | View |
Fragaria vesca | FvH4_7g08650 | PTHR11566:SF80 - DYNAMIN-RELATED PROTEIN 1C | Fvb7 | + | View |
Gossypium hirsutum | Gohir.D13G013400 | PTHR11566//PTHR11566:SF80 - DYNAMIN // DYNAMIN-RELATED PROTEIN 1C | D13 | - | View |
Gossypium hirsutum | Gohir.A13G012300 | PTHR11566//PTHR11566:SF80 - DYNAMIN // DYNAMIN-RELATED PROTEIN 1C | A13 | - | View |
Gossypium raimondii | Gorai.013G014400 | Chr13 | - | View | |
Hydrangea macrophylla | Hma1.2p1_0021F.1_g014310 | Hma1.2p1_0021F.1 | + | View | |
Lotus japonicus | Lj3g0025908 | PTHR11566:SF80 - DYNAMIN-RELATED PROTEIN 1C | chr3 | + | View |
Lonicera japonica | Lj9C549T4 | GWHAAZE00000009 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_0_4961 | K01528 - dynamin GTPase (DNM) | Lsat_1_v8_lg_1 | + | View |
Lactuca sativa | Lsat_1_v5_gn_7_11601 | Lsat_1_v8_lg_7 | - | View | |
Malus domestica | MD02G1226500 | DYNAMIN-like 1E | Chr02 | - | View |
Malus domestica | MD07G1087500 | DYNAMIN-like 1E | Chr07 | + | View |
Manihot esculenta | Manes.05G059400 | Chromosome05 | + | View | |
Nelumbo nucifera | Nn6g33676 | chr6 | + | View | |
Punica granatum | PGR042G1185 | NC_045130.1 | + | View | |
Prunus persica | Prupe.2G114300 | PTHR11566//PTHR11566:SF77 - DYNAMIN // SUBFAMILY NOT NAMED | Pp02 | + | View |
Phaseolus vulgaris | Phvul.010G040900 | PTHR11566:SF80 - DYNAMIN-RELATED PROTEIN 1C | Chr10 | - | View |
Quercus lobata | QL02p103137 | CM012294 | + | View | |
Quercus lobata | QL04p024660 | 4 | + | View | |
Quercus lobata | QL04p025889 | 4 | - | View | |
Rhododendron simsii | Rhsim07G0039700 | chr07 | + | View | |
Salvia bowleyana | SalBow4G2063 | GWHASIU00000008 | + | View | |
Salvia bowleyana | SalBow5G5211 | GWHASIU00000003 | - | View | |
Salix brachista | Sabra01G0115900 | GWHAAZH00000001 | - | View | |
Sechium edule | Sed0027891 | LG12 | - | View | |
Solanum lycopersicum | Solyc08g077360.3 | Dynamin (AHRD V3.3 *** E5GB64_CUCME) | SL4.0ch08 | - | View |
Solanum lycopersicum | Solyc01g088520.3 | Dynamin-related protein 1E (AHRD V3.3 *-* A0A1U8EK16_CAPAN) | SL4.0ch01 | - | View |
Solanum pennellii | Sopen01g035380 | At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ëdynamin 2ë domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection. | DYNAMIN-like 1E (DL1E) | FUNCTIONS IN: GTP binding, GTPase activity | INVOLVED IN: response to cadmium ion, vesicle-mediated transport, defense response to fungus | LOCATED IN: mitochondrion, plasma membrane, vacuole | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector , Dynamin, GTPase domain , Dynamin, GTPase region, conserved site , GTPase effector domain, GED , Dynamin central region | BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D | Spenn-ch01 | - | View |
Solanum tuberosum | PGSC0003DMG400001682 | Dynamin | ST4.03ch01 | + | View |
Trochodendron aralioides | TAR629G2274 | group0 | - | View | |
Trochodendron aralioides | TAR636G1860 | group1 | + | View | |
Trochodendron aralioides | TAR375G0797 | group15 | - | View | |
Trochodendron aralioides | TAR374G0628 | group12 | - | View | |
Theobroma cacao | Thecc.10G002000 | DYNAMIN-like 1E | Chromosome_10 | - | View |
Trifolium pratense | TPR.G17349 | Tp57577_TGAC_v2_LG5 | - | View | |
Tripterygium wilfordii | TWI23G1300 | NC_052239.1 | - | View | |
Vaccinium macrocarpon | vmacro13535 | Similar to DRP1E: Dynamin-related protein 1E (Arabidopsis thaliana OX%3D3702) | chr7_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vaccinium macrocarpon | vmacro21090 | Similar to DRP1E: Dynamin-related protein 1E (Arabidopsis thaliana OX%3D3702) | chr10_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vitis vinifera | GSVIVG01018380001 | chr15 | - | View |