Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0013901 PREDICTED: GTP-binding protein YPTM2 [Populus euphratica] Chr14 + View
CSS0005974 PREDICTED: GTP-binding protein YPTM2 [Eucalyptus grandis] Chr3 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G270 LG-6 - View
Acer truncatum Atru.chr5.119 chr5 + View
Acer truncatum Atru.chr9.1236 chr9 + View
Actinidia chinensis Actinidia31502 Lachesis_group20 - View
Actinidia chinensis Actinidia25898 Lachesis_group22 + View
Actinidia chinensis Actinidia02184 Lachesis_group23 - View
Actinidia chinensis Actinidia10853 Lachesis_group14 + View
Actinidia chinensis Actinidia12141 Lachesis_group0 - View
Arabidopsis lyrata AL8G10830 scaffold_8 - View
Arabidopsis lyrata AL7G37090 scaffold_7 + View
Avicennia marina MSTRG.12142 ScioBoG_17730_HRSCAF_17811 - View
Amaranthus hybridus Ah.12g054130 Ras-related protein RABD2c (AtRABD2c) (Ras-related protein Rab1C) (AtRab1C) AmaHy_arrow1_Scaffold_12 + View
Aquilegia oxysepala Aqoxy3G02706 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.H2HX6D K07874 - Ras-related protein Rab-1A (RAB1A) arahy.Tifrunner.gnm1.Arahy.11 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IEZ0A8 K07874 - Ras-related protein Rab-1A (RAB1A) arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.27KESB K07874 - Ras-related protein Rab-1A (RAB1A) arahy.Tifrunner.gnm1.Arahy.04 + View
Arabidopsis thaliana AT4G17530 RAB GTPase homolog 1C AtRabD2c encodes a Rab GTPase%2C which plays important roles in pollen development%2C germination and tube elongation. RAB GTPase homolog 1C (RAB1C)%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: protein transport%2C small GTPase mediated signal transduction%3B LOCATED IN: plasma membrane%2C vacuole%2C membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 16 growth stages%3B CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Small GTPase (InterPro:IPR020851)%2C Ras (InterPro:IPR013753)%2C Ras small GTPase%2C Rab type (InterPro:IPR003579)%3B BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1)%3B Has 29496 Blast hits to 29428 proteins in 784 species: Archae - 23%3B Bacteria - 169%3B Metazoa - 15486%3B Fungi - 4134%3B Plants - 3462%3B Viruses - 20%3B Other Eukaryotes - 6202 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT5G47200 RAB GTPase homolog 1A AtRabD2b encodes a Rab GTPase%2C which plays important roles in pollen development%2C germination and tube elongation. RAB GTPase homolog 1A (RAB1A)%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: protein transport%2C small GTPase mediated signal transduction%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Small GTPase (InterPro:IPR020851)%2C Ras (InterPro:IPR013753)%2C Ras small GTPase%2C Rab type (InterPro:IPR003579)%3B BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1C (TAIR:AT4G17530.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR0057G065 AmTr_v1.0_scaffold00111 + View
Brassica carinata BcaC06g34277 ChrC06 - View
Brassica carinata BcaC06g31408 ChrC06 - View
Brassica carinata BcaNung03457 Contig1189 + View
Brassica carinata BcaC07g38086 ChrC07 - View
Brassica carinata BcaB07g30787 ChrB07 - View
Brassica carinata BcaC04g21640 ChrC04 - View
Brassica carinata BcaC06g33560 ChrC06 + View
Brassica carinata BcaB04g18426 ChrB04 - View
Brassica carinata BcaC09g51633 ChrC09 + View
Brassica napus A09p22920 A09 + View
Brassica napus C02p48540 C02 + View
Brassica napus C09p29500 C09 + View
Brassica napus A02p30940 A02 + View
Brassica napus C07p48830 C07 - View
Brassica napus A06p45210 A06 - View
Brassica napus A03p50510 A03 - View
Brassica napus A08p13210 A08 - View
Brassica napus C07p30890 C07 + View
Brassica oleracea BolC7t43633H C7 + View
Brassica oleracea BolC9t55813H C9 + View
Brassica oleracea BolC7t45391H C7 - View
Brassica oleracea BolC8t48500H C8 - View
Brassica oleracea BolC2t10888H C2 + View
Brassica rapa BraA09t37893Z A09 + View
Brassica rapa BraA02t08105Z A02 + View
Brassica rapa BraA06t27390Z A06 - View
Brassica rapa BraA03t14140Z A03 - View
Beta vulgaris EL10Ac5g12297 K07874 - Ras-related protein Rab-1A (RAB1A) Chr5_EL10_PGA_scaffold2 + View
Beta vulgaris EL10Ac1g00746 K07874 - Ras-related protein Rab-1A (RAB1A) Chr1_EL10_PGA_scaffold3 + View
Capsicum annuum CAN.G761.24 PGAv.1.6.scaffold761 + View
Cannabis sativa CANSAT21G2515 NC_044374.1 - View
Cicer arietinum L. Ca_22004_v3 Ca_LG7_v3 - View
Corylus avellana Haze_02854 Similar to YPTM2: GTP-binding protein YPTM2 (Zea mays OX%3D4577) 1 - View
Coffea canephora Cc08_g11600 Ras-related protein RABD2a chr8 + View
Citrus clementina Ciclev10023527m.g scaffold_3 + View
Ceratophyllum demersum CDE04G1140 2 + View
Ceratophyllum demersum CDE11G0357 9 + View
Ceratophyllum demersum CDE02G0089 1 + View
Carpinus fangiana Cfa013595 Cfa05 - View
Cardamine hirsuta CARHR174160 Ras-related protein Rab-1B Chr6 - View
Cardamine hirsuta CARHR224230 Ras-related protein Rab-1A Chr7 - View
Carya illinoinensis CiPaw.12G047900 K07874 - Ras-related protein Rab-1A (RAB1A) Chr12 + View
Citrullus lanatus ClCG10G002340 Ras-related protein Rab-1A CG_Chr10 - View
Citrullus lanatus ClCG09G012830 Ras-related protein Rab-1A CG_Chr09 + View
Cucumis melo MELO3C013910.2 Ras-related GTP-binding protein chr06 + View
Chenopodium quinoa AUR62023394 RABD2A: Ras-related protein RABD2a C_Quinoa_Scaffold_1352 + View
Chenopodium quinoa AUR62018865 YPTM2: GTP-binding protein YPTM2 C_Quinoa_Scaffold_1817 + View
Chenopodium quinoa AUR62007146 YPTM2: GTP-binding protein YPTM2 C_Quinoa_Scaffold_1971 - View
Capsella rubella Carub.0007s2386 K07874 - Ras-related protein Rab-1A (RAB1A) scaffold_7 + View
Capsella rubella Carub.0008s0054 K07874 - Ras-related protein Rab-1A (RAB1A) scaffold_8 - View
Cucumis sativus L. CsaV3_3G002400 Ras-related protein like chr3 + View
Daucus carota DCAR_029472 hypothetical protein DCARv2_Chr9 - View
Daucus carota DCAR_008337 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv21688 GWHABJS00000017 - View
Davidia involucrata Dinv28853 GWHABJS00000003 - View
Davidia involucrata Dinv44057 GWHABJS00000020 + View
Durio zibethinus Duzib205G0798 NW_019168381.1 + View
Durio zibethinus Duzib068G1039 NW_019167838.1 + View
Durio zibethinus Duzib084G0470 NW_019167827.1 + View
Erigeron canadensis ECA240G2419 Conyza_canadensis_scaffold:5 - View
Eucalyptus grandis Eucgr.D02119 Chr04 - View
Eucalyptus grandis Eucgr.E00370 Chr05 + View
Eutrema salsugineum Thhalv10026573m.g K07874 - Ras-related protein Rab-1A (RAB1A) scaffold_1 + View
Eutrema salsugineum Thhalv10001029m.g K07874 - Ras-related protein Rab-1A (RAB1A) scaffold_20 + View
Fragaria x ananassa FAN18G1265 K07874 - Ras-related protein Rab-1A (RAB1A) Fvb5-1 - View
Fragaria x ananassa FAN08G1007 K07874 - Ras-related protein Rab-1A (RAB1A) Fvb5-3 + View
Fragaria x ananassa FAN13G0987 K07874 - Ras-related protein Rab-1A (RAB1A) Fvb5-2 - View
Fragaria x ananassa FAN06G5032 K07874 - Ras-related protein Rab-1A (RAB1A) Fvb7-2 + View
Fragaria x ananassa FAN04G0854 PTHR24073:SF520 - RAS-RELATED PROTEIN RABD2B-RELATED Fvb5-4 - View
Fragaria vesca FvH4_5g20060 PTHR24073:SF520 - RAS-RELATED PROTEIN RABD2B-RELATED Fvb5 - View
Gossypium hirsutum Gohir.A03G005600 K07874 - Ras-related protein Rab-1A (RAB1A) A03 + View
Gossypium hirsutum Gohir.D03G166900 K07874 - Ras-related protein Rab-1A (RAB1A) D03 - View
Gossypium hirsutum Gohir.A08G166000 K07874 - Ras-related protein Rab-1A (RAB1A) A08 + View
Gossypium hirsutum Gohir.D08G184900 K07874 - Ras-related protein Rab-1A (RAB1A) D08 + View
Glycine max Glyma.05G064300 K07874 - Ras-related protein Rab-1A (RAB1A) Gm05 - View
Glycine max Glyma.03G110200 K07874 - Ras-related protein Rab-1A (RAB1A) Gm03 + View
Glycine max Glyma.09G243300 K07874 - Ras-related protein Rab-1A (RAB1A) Gm09 - View
Glycine max Glyma.07G114801 PTHR24073//PTHR24073:SF520 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABD2B-RELATED Gm07 - View
Glycine max Glyma.17G146100 K07874 - Ras-related protein Rab-1A (RAB1A) Gm17 - View
Gossypium raimondii Gorai.003G176500 Chr03 - View
Gossypium raimondii Gorai.004G194200 Chr04 + View
Helianthus annuus HanXRQChr03g0089851 Putative small GTPase superfamily; Ran GTPase; Small GTPase superfamily, ARF type; P-loop containing nucleoside triphosphate hydrolase HanXRQChr03 + View
Lupinus albus Lalb_Chr16g0386481 K07874 - Ras-related protein Rab-1A (RAB1A) Lalb_Chr16 + View
Lupinus albus Lalb_Chr19g0126501 K07874 - Ras-related protein Rab-1A (RAB1A) Lalb_Chr19 - View
Lupinus albus Lalb_Chr05g0220971 K07874 - Ras-related protein Rab-1A (RAB1A) Lalb_Chr05 + View
Lotus japonicus Lj4g0004642 K07874 - Ras-related protein Rab-1A (RAB1A) chr4 - View
Lotus japonicus Lj3g0004333 K07874 - Ras-related protein Rab-1A (RAB1A) chr3 + View
Lonicera japonica Lj2A227G60 GWHAAZE00000002 - View
Lonicera japonica Lj8C275G17 GWHAAZE00000008 - View
Lonicera japonica Lj9A555T35 GWHAAZE00000009 + View
Lonicera japonica Lj7A548T48 GWHAAZE00000007 - View
Lactuca sativa Lsat_1_v5_gn_3_126840 Lsat_1_v8_lg_3 + View
Lactuca sativa Lsat_1_v5_gn_6_94081 K07874 - Ras-related protein Rab-1A (RAB1A) Lsat_1_v8_lg_6 - View
Lactuca sativa Lsat_1_v5_gn_4_39440 Lsat_1_v8_lg_4 + View
Magnolia biondii MBI04_g22923_MAGBIO AED:0.19 Chr04 + View
Malus domestica MD06G1049500 RAB GTPase homolog 1C Chr06 + View
Malus domestica MD04G1050400 RAB GTPase homolog 1C Chr04 - View
Manihot esculenta Manes.01G086400 Chromosome01 - View
Manihot esculenta Manes.02G043500 Chromosome02 - View
Manihot esculenta Manes.05G055500 Chromosome05 - View
Medicago truncatula Medtr8g006970 RAB GTPase-like protein A5D chr8 - View
Medicago truncatula Medtr4g099470 RAB GTPase-like protein A2D chr4 + View
Nelumbo nucifera Nn6g33812 chr6 + View
Nelumbo nucifera Nn1g00827 chr1 + View
Nicotiana tabacum Nitab4.5_0000506g0040 P-loop containing nucleoside triphosphate hydrolase, Small GTPase superfamily, Small GTPase superfamily, Rho type, Small GTPase superfamily, Rab type, Small GTPase superfamily, Ras type, Ran GTPase, Small GTP-binding protein domain Nitab4.5_0000506 - View
Oryza sativa ssp. japonica Os02g0653800 Similar to GTP-binding protein. chr02 + View
Petunia axillaris Peaxi162Scf00190g01011 Ras-related protein Rab-1A Peaxi162Scf00190 + View
Punica granatum PGR042G1191 NC_045130.1 + View
Punica granatum PGR031G2135 NC_045127.1 + View
Prunus persica Prupe.5G060000 PTHR24073:SF520 - RAS-RELATED PROTEIN RABD2B-RELATED Pp05 + View
Pisum sativum Psat4g224400 Ras family chr4LG4 + View
Pisum sativum Psat4g075000 Ras family chr4LG4 - View
Papaver somniferum PSO063G4164 NC_039364.1 - View
Papaver somniferum PSO782G3531 NC_039365.1 + View
Populus trichocarpa Potri.014G049400 K07874 - Ras-related protein Rab-1A (RAB1A) Chr14 - View
Populus trichocarpa Potri.002G138400 K07874 - Ras-related protein Rab-1A (RAB1A) Chr02 + View
Populus trichocarpa Potri.003G081800 K07874 - Ras-related protein Rab-1A (RAB1A) Chr03 - View
Populus trichocarpa Potri.001G152800 K07874 - Ras-related protein Rab-1A (RAB1A) Chr01 + View
Phaseolus vulgaris Phvul.003G224200 K07874 - Ras-related protein Rab-1A (RAB1A) Chr03 - View
Phaseolus vulgaris Phvul.010G048200 K07874 - Ras-related protein Rab-1A (RAB1A) Chr10 + View
Quercus lobata QL12p009522 12 + View
Rosa chinensis RcHm_v2.0_Chr1g0373531 RcHm_v2.0_Chr1 + View
Rosa chinensis RcHm_v2.0_Chr7g0204921 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim07G0117900 chr07 - View
Rhododendron simsii Rhsim01G0141200 chr01 - View
Striga asiatica SGA_v2.0_scaffold199G41236 scaffold199 - View
Striga asiatica SGA_v2.0_scaffold104G30214 scaffold104 - View
Salvia bowleyana SalBow3G0321 GWHASIU00000006 - View
Salvia bowleyana SalBow6G6467 GWHASIU00000002 + View
Salix brachista Sabra02G0107700 GWHAAZH00000002 - View
Salix brachista Sabra01G0122700 GWHAAZH00000001 + View
Salix brachista Sabra03G0052700 GWHAAZH00000003 - View
Sechium edule Sed0022801 LG05 - View
Sechium edule Sed0001223 LG04 + View
Sechium edule Sed0021657 LG01 - View
Solanum lycopersicum Solyc08g078070.4 small GTP-binding protein A SL4.0ch08 + View
Solanum lycopersicum Solyc01g090170.4 Ras-related small GTP-binding protein (AHRD V3.3 *** A0A1Y0K2B8_9ROSI) SL4.0ch01 + View
Schrenkiella parvula Sp7g16630 K07874 - Ras-related protein Rab-1A (RAB1A) ch7-4 + View
Schrenkiella parvula Sp2g12000 K07874 - Ras-related protein Rab-1A (RAB1A) ch2-4 + View
Solanum pennellii Sopen01g035960 Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation. | RAS 5 (RA-5) | FUNCTIONS IN: GTP binding | INVOLVED IN: response to cadmium ion, ER to Golgi vesicle-mediated transport | LOCATED IN: plasma membrane, vacuole | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ras GTPase , Small GTP-binding protein , Small GTPase , Ras , Ras small GTPase, Rab type | BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A Spenn-ch01 + View
Solanum pennellii Sopen08g026570 GTP-binding protein YPTM2 - Zea mays (Maize), Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation. | RAS 5 (RA-5) | FUNCTIONS IN: GTP binding | INVOLVED IN: response to cadmium ion, ER to Golgi vesicle-mediated transport | LOCATED IN: plasma membrane, vacuole | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ras GTPase , Small GTP-binding protein , Small GTPase , Ras , Ras small GTPase, Rab type | BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG400026226 Small GTP-binding protein ST4.03ch08 + View
Selenicereus undatus Hund14502 Scaffold_33677 + View
Trochodendron aralioides TAR375G1112 group15 + View
Trochodendron aralioides TAR629G1296 group0 + View
Trochodendron aralioides TAR636G2635 group1 - View
Theobroma cacao Thecc.01G395700 Chromosome_1 - View
Theobroma cacao Thecc.03G243900 Ras 5 Chromosome_3 + View
Tripterygium wilfordii TWI60G0307 NC_052246.1 + View
Tripterygium wilfordii TWI15G0722 NC_052247.1 - View
Tripterygium wilfordii TWI39G0092 NC_052250.1 + View
Tripterygium wilfordii TWI81G0179 NC_052251.1 - View
Vaccinium macrocarpon vmacro14133 Similar to RABD2C: Ras-related protein RABD2c (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro00037 Similar to YPTM2: GTP-binding protein YPTM2 (Zea mays OX%3D4577) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G0774 CM024070.1 - View
Vigna mungo VMungo0251G0189 CM024069.1 - View
Vigna mungo VMungo0331G0154 CM024078.1 + View
Vitis vinifera GSVIVG01018291001 chr15 + View