Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0050201 PREDICTED: chloride channel protein CLC-f-like [Nicotiana tomentosiformis] Chr5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G590 LG-10 + View
Acer truncatum Atru.chr2.3905 chr2 + View
Actinidia chinensis Actinidia30344 Lachesis_group10 + View
Arabidopsis lyrata AL1G63690 scaffold_1 - View
Avicennia marina MSTRG.14530 ScioBoG_18782_HRSCAF_18867 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.E7XD18 PTHR11926:SF343 - UDP-GLYCOSYLTRANSFERASE 88A1 arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FAJL4V PTHR11689//PTHR11689:SF77 - CHLORIDE CHANNEL // CHLORIDE CHANNEL PROTEIN CLC-F arahy.Tifrunner.gnm1.Arahy.05 - View
Arabidopsis thaliana AT1G55620 chloride channel F Encodes a chloride channel protein that has been localized to the chloroplast and golgi apparatus. Complements yeast gef1 mutant and therefor may function to acidify the golgi lumen. chloride channel F (CLC-F)%3B FUNCTIONS IN: ion channel activity%2C voltage-gated chloride channel activity%3B INVOLVED IN: chloride transport%2C transmembrane transport%3B LOCATED IN: Golgi apparatus%2C chloroplast%2C membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Chloride channel%2C core (InterPro:IPR014743)%2C Chloride channel%2C voltage gated (InterPro:IPR001807)%2C Cystathionine beta-synthase%2C core (InterPro:IPR000644)%3B BEST Arabidopsis thaliana protein match is: chloride channel E (TAIR:AT4G35440.2)%3B Has 8610 Blast hits to 8392 proteins in 1951 species: Archae - 280%3B Bacteria - 6051%3B Metazoa - 795%3B Fungi - 382%3B Plants - 225%3B Viruses - 0%3B Other Eukaryotes - 877 (source: NCBI BLink). chloride channel F (CLC-F)%3B FUNCTIONS IN: ion channel activity%2C voltage-gated chloride channel activity%3B INVOLVED IN: chloride transport%2C transmembrane transport%3B LOCATED IN: Golgi apparatus%2C chloroplast%2C membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Chloride channel%2C core (InterPro:IPR014743)%2C Chloride channel%2C voltage gated (InterPro:IPR001807)%2C Cystathionine beta-synthase%2C core (InterPro:IPR000644)%3B BEST Arabidopsis thaliana protein match is: chloride channel E (TAIR:AT4G35440.1)%3B Has 8626 Blast hits to 8538 proteins in 2008 species: Archae - 276%3B Bacteria - 6042%3B Metazoa - 796%3B Fungi - 384%3B Plants - 229%3B Viruses - 0%3B Other Eukaryotes - 899 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB07g33198 ChrB07 + View
Brassica carinata BcaC01g01545 ChrC01 - View
Brassica carinata BcaC08g43640 ChrC08 - View
Brassica napus A06p00100 A06 + View
Brassica napus C03p92970 C03 - View
Brassica napus C06p10590 C06 - View
Brassica oleracea BolC3t21602H C3 - View
Brassica oleracea BolC6t36139H C6 - View
Brassica rapa BraA06t23225Z A06 + View
Brassica rapa BraA08t32099Z A08 + View
Capsicum annuum CAN.G623.78 PGAv.1.6.scaffold623 + View
Capsicum annuum CAN.G492.60 PGAv.1.6.scaffold492 + View
Cannabis sativa CANSAT11G0305 NC_044377.1 - View
Cicer arietinum L. Ca_14129_v3 Ca_LG5_v3 - View
Corylus avellana Haze_09921 Similar to CLC-F: Chloride channel protein CLC-f (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc05_g15780 Chloride channel protein CLC-f chr5 + View
Citrus clementina Ciclev10007558m.g scaffold_1 + View
Ceratophyllum demersum CDE06G1772 4 - View
Carpinus fangiana Cfa016967 Cfa07 + View
Cardamine hirsuta CARHR045320 chloride channel F Chr1 - View
Carya illinoinensis CiPaw.11G211000 PTHR11689//PTHR11689:SF77 - CHLORIDE CHANNEL // CHLORIDE CHANNEL PROTEIN CLC-F Chr11 + View
Citrullus lanatus ClCG10G003850 H(+)/Cl(-) exchange transporter ClcA CG_Chr10 + View
Cucumis melo MELO3C014064.2 Chloride channel protein chr06 + View
Corchorus olitorius COL.COLO4_07794 Cystathionine beta-synthase%2C core AWUE01013457.1 + View
Carica papaya Cpa.g.sc12.59 supercontig_12 - View
Capsella rubella Carub.0001s4414 PTHR11689//PTHR11689:SF77 - CHLORIDE CHANNEL // CHLORIDE CHANNEL PROTEIN CLC-F scaffold_1 - View
Cucumis sativus L. CsaV3_3G003830 Chloride channel protein chr3 + View
Daucus carota DCAR_016807 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv42532 GWHABJS00000013 - View
Davidia involucrata Dinv19638 GWHABJS00000001 + View
Durio zibethinus Duzib268G1135 NW_019168270.1 - View
Erigeron canadensis ECA246G2707 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.F01982 Chr06 - View
Erythranthe guttata Migut.H01705 scaffold_8 - View
Eutrema salsugineum Thhalv10011251m.g PTHR11689:SF77 - CHLORIDE CHANNEL PROTEIN CLC-F scaffold_7 + View
Fragaria x ananassa FAN25G3443 PTHR11689//PTHR11689:SF77 - CHLORIDE CHANNEL // CHLORIDE CHANNEL PROTEIN CLC-F Fvb3-1 + View
Fragaria x ananassa FAN16G2373 PTHR11689//PTHR11689:SF77 - CHLORIDE CHANNEL // CHLORIDE CHANNEL PROTEIN CLC-F Fvb3-3 - View
Fragaria x ananassa FAN11G2150 PTHR11689//PTHR11689:SF77 - CHLORIDE CHANNEL // CHLORIDE CHANNEL PROTEIN CLC-F Fvb3-4 - View
Fragaria x ananassa FAN21G1402 PTHR11689:SF77 - CHLORIDE CHANNEL PROTEIN CLC-F Fvb3-2 - View
Fragaria vesca FvH4_3g41470 PTHR11689//PTHR11689:SF77 - CHLORIDE CHANNEL // CHLORIDE CHANNEL PROTEIN CLC-F Fvb3 - View
Gossypium hirsutum Gohir.A13G128000 PTHR11689//PTHR11689:SF77 - CHLORIDE CHANNEL // CHLORIDE CHANNEL PROTEIN CLC-F A13 - View
Gossypium hirsutum Gohir.D13G131500 PTHR11689//PTHR11689:SF77 - CHLORIDE CHANNEL // CHLORIDE CHANNEL PROTEIN CLC-F D13 - View
Glycine max Glyma.06G320900 PTHR11689//PTHR11689:SF77 - CHLORIDE CHANNEL // CHLORIDE CHANNEL PROTEIN CLC-F Gm06 - View
Glycine max Glyma.04G114800 PTHR11689//PTHR11689:SF77 - CHLORIDE CHANNEL // CHLORIDE CHANNEL PROTEIN CLC-F Gm04 + View
Gossypium raimondii Gorai.013G147500 Chr13 - View
Helianthus annuus HanXRQChr08g0232871 Probable chloride channel F HanXRQChr08 - View
Helianthus annuus HanXRQChr05g0160721 Putative chloride channel, voltage gated HanXRQChr05 - View
Hydrangea macrophylla Hma1.2p1_0321F.1_g124380 Hma1.2p1_0321F.1 + View
Lupinus albus Lalb_Chr15g0079901 PTHR11689:SF77 - CHLORIDE CHANNEL PROTEIN CLC-F Lalb_Chr15 - View
Lupinus albus Lalb_Chr04g0259431 PTHR11689:SF77 - CHLORIDE CHANNEL PROTEIN CLC-F Lalb_Chr04 - View
Lonicera japonica Lj8C184T2 GWHAAZE00000008 + View
Lonicera japonica Lj1A902G38 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_5_261 Lsat_1_v8_lg_5 + View
Magnolia biondii MBI14_g10257_MAGBIO AED:0.16 Chr14 - View
Magnolia biondii MBI15_g36002_MAGBIO AED:0.09 Chr15 - View
Malus domestica MD03G1044300 chloride channel F Chr03 + View
Malus domestica MD11G1047300 chloride channel F Chr11 + View
Manihot esculenta Manes.05G204400 Chromosome05 - View
Manihot esculenta Manes.01G007500 Chromosome01 + View
Medicago truncatula Medtr3g009530 ClC chloride channel family protein chr3 - View
Nelumbo nucifera Nn1g07618 chr1 - View
Nicotiana tabacum Nitab4.5_0000152g0010 CBS domain, Chloride channel, core, Chloride channel, voltage gated Nitab4.5_0000152 - View
Nicotiana tabacum Nitab4.5_0000611g0260 CBS domain, Chloride channel, core, Chloride channel, voltage gated Nitab4.5_0000611 - View
Olea europaea Oeu061792.2 chr6 + View
Olea europaea Oeu052882.4 chr21 - View
Oryza sativa ssp. japonica Os08g0499200 Similar to Chloride channel protein CLC-f (AtCLC-f). Splice isoform 2. chr08 + View
Petunia axillaris Peaxi162Scf00232g00089 chloride channel F Peaxi162Scf00232 + View
Punica granatum PGR083G0554 NC_045133.1 - View
Prunus persica Prupe.6G036200 PTHR11689:SF77 - CHLORIDE CHANNEL PROTEIN CLC-F Pp06 + View
Populus trichocarpa Potri.001G472700 PTHR11689//PTHR11689:SF77 - CHLORIDE CHANNEL // CHLORIDE CHANNEL PROTEIN CLC-F Chr01 - View
Phaseolus vulgaris Phvul.005G005200 PTHR11689:SF77 - CHLORIDE CHANNEL PROTEIN CLC-F Chr05 + View
Rosa chinensis RcHm_v2.0_Chr5g0074431 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim04G0007100 chr04 - View
Striga asiatica SGA_v2.0_scaffold92G28153 scaffold92 - View
Salix brachista Sabra16G0320900 GWHAAZH00000016 - View
Simmondsia chinensis Sc03g0011810 GWHAASQ00000003 + View
Sechium edule Sed0027047 LG08 + View
Solanum lycopersicum Solyc10g005690.3 Chloride channel protein (AHRD V3.3 *** A0A2G3BC88_CAPCH) SL4.0ch10 - View
Solanum lycopersicum Solyc07g066210.3 Chloride channel protein (AHRD V3.3 *** Q9ARC6_SOLLC) SL4.0ch07 + View
Schrenkiella parvula Sp1g41240 PTHR11689//PTHR11689:SF77 - CHLORIDE CHANNEL // CHLORIDE CHANNEL PROTEIN CLC-F ch1-2 - View
Solanum pennellii Sopen10g001660 Encodes a chloride channel protein that has been localized to the chloroplast and golgi apparatus. Complements yeast gef1 mutant and therefor may function to acidify the golgi lumen. | chloride channel F (CLC-F) | FUNCTIONS IN: ion channel activity, voltage-gated chloride channel activity | INVOLVED IN: chloride transport, transmembrane transport | LOCATED IN: Golgi apparatus, chloroplast, membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Chloride channel, core , Chloride channel, voltage gated , Cystathionine beta-synthase, core | BEST Arabidopsis thaliana protein match is: chloride channel E Spenn-ch10 - View
Solanum pennellii Sopen07g034390 Encodes a chloride channel protein that has been localized to the chloroplast and golgi apparatus. Complements yeast gef1 mutant and therefor may function to acidify the golgi lumen. | chloride channel F (CLC-F) | FUNCTIONS IN: ion channel activity, voltage-gated chloride channel activity | INVOLVED IN: chloride transport, transmembrane transport | LOCATED IN: Golgi apparatus, chloroplast, membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Chloride channel, core , Chloride channel, voltage gated , Cystathionine beta-synthase, core | BEST Arabidopsis thaliana protein match is: chloride channel E Spenn-ch07 + View
Solanum tuberosum PGSC0003DMG400011234 Voltage-gated clc-type chloride channel ST4.03ch10 - View
Solanum tuberosum PGSC0003DMG400022248 Voltage-gated clc-type chloride channel ST4.03ch07 + View
Selenicereus undatus Hund22964 Scaffold_33680 + View
Trochodendron aralioides TAR626G1132 group3 - View
Theobroma cacao Thecc.07G000800 Chloride channel protein CLC-f Chromosome_7 - View
Tarenaya hassleriana THA.LOC104810312 chloride channel protein CLC-f isoform X1 NW_010965216.1 + View
Tarenaya hassleriana THA.LOC104815677 chloride channel protein CLC-f-like NW_010965696.1 - View
Trifolium pratense TPR.G16698 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI38G1673 NC_052252.1 + View
Vaccinium macrocarpon vmacro09796 Similar to CLC-F: Chloride channel protein CLC-f (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1080G1124 CM024079.1 - View
Vitis vinifera GSVIVG01014852001 chr19 + View
Zea mays Zm00001eb034010 Zm00001e003446 Chloride channel protein Chloride channel protein CLC-f 1 + View