Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0046863 putative ubiquitin-conjugating enzyme E2 18 -like protein [Gossypium arboreum] Contig579 + View
CSS0011308 PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Musa acuminata subsp. malaccensis] Chr2 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G13210 LG-6 + View
Acer truncatum Atru.chr3.733 chr3 - View
Acer truncatum Atru.chr13.396 chr13 - View
Actinidia chinensis Actinidia26103 Lachesis_group25 - View
Actinidia chinensis Actinidia22513 Lachesis_group28 + View
Actinidia chinensis Actinidia15364 Lachesis_group26 + View
Actinidia chinensis Actinidia19223 Lachesis_group8 + View
Actinidia chinensis Actinidia29805 Lachesis_group27 + View
Arabidopsis lyrata AL7G14680 scaffold_7 - View
Avicennia marina MSTRG.1246 ScioBoG_102833_HRSCAF_103052 + View
Avicennia marina MSTRG.25202 ScioBoG_4119_HRSCAF_4138 - View
Amaranthus hybridus Ah.03g141280 Probable ubiquitin-conjugating enzyme E2 16 (EC 2.3.2.23) (E2 ubiquitin-conjugating enzyme 16) (Ubiquitin carrier protein 16) AmaHy_arrow1_Scaffold_3 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.F22IQH 2.1.1.198 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase arahy.Tifrunner.gnm1.Arahy.17 - View
Arabidopsis thaliana AT4G36410 ubiquitin-conjugating enzyme 17 ubiquitin-conjugating enzyme ubiquitin-conjugating enzyme 17 (UBC17)%3B FUNCTIONS IN: ubiquitin-protein ligase activity%2C small conjugating protein ligase activity%3B INVOLVED IN: response to gibberellin stimulus%2C ubiquitin-dependent protein catabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135)%2C Ubiquitin-conjugating enzyme%2C E2 (InterPro:IPR000608)%3B BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 16 (TAIR:AT1G75440.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT1G75440 ubiquitin-conjugating enzyme 16 ubiquitin-conjugating enzyme 16 (UBC16)%3B FUNCTIONS IN: ubiquitin-protein ligase activity%2C small conjugating protein ligase activity%3B INVOLVED IN: ubiquitin-dependent protein catabolic process%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135)%2C Ubiquitin-conjugating enzyme%2C E2 (InterPro:IPR000608)%3B BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 18 (TAIR:AT5G42990.1)%3B Has 8796 Blast hits to 8793 proteins in 382 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 3895%3B Fungi - 1929%3B Plants - 1614%3B Viruses - 20%3B Other Eukaryotes - 1336 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaNung00734 Contig350 - View
Brassica napus C01p02630 C01 - View
Brassica napus C06p49440 C06 + View
Brassica napus A01p02430 A01 - View
Brassica oleracea BolC1t00251H C1 - View
Brassica oleracea BolC7t46593H C7 + View
Brassica oleracea BolC6t39980H C6 + View
Brassica rapa BraA01t00230Z A01 - View
Brassica rapa BraA03t15493Z A03 + View
Beta vulgaris EL10As8g23881 PTHR24067//PTHR24067:SF125 - UBIQUITIN-CONJUGATING ENZYME E2 // UBIQUITIN-CONJUGATING ENZYME E2 18-RELATED Scaffold_0008 + View
Capsicum annuum CAN.G358.25 PGAv.1.6.scaffold358 + View
Cannabis sativa CANSAT01G3256 NC_044373.1 - View
Cicer arietinum L. Ca_02074_v3 Ca_LG1_v3 - View
Corylus avellana Haze_03836 Similar to UBC16: Probable ubiquitin-conjugating enzyme E2 16 (Arabidopsis thaliana OX%3D3702) 2 + View
Corylus avellana Haze_22561 Protein of unknown function 3 + View
Coffea canephora Cc07_g10130 Probable ubiquitin-conjugating enzyme E2 16 chr7 - View
Coffea canephora Cc10_g02360 Probable ubiquitin-conjugating enzyme E2 16 chr10 - View
Citrus clementina Ciclev10002737m.g scaffold_5 + View
Citrus clementina Ciclev10026664m.g scaffold_7 + View
Cardamine hirsuta CARHR244740 ubiquitin-conjugating enzyme 17 Chr7 + View
Cardamine hirsuta CARHR068840 ubiquitin-conjugating enzyme 16 Chr2 + View
Carya illinoinensis CiPaw.07G156300 2.1.1.198 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Chr07 - View
Carya illinoinensis CiPaw.07G053200 K10688 - ubiquitin-conjugating enzyme E2 W (UBE2W, UBC16) Chr07 - View
Citrullus lanatus ClCG07G008750 UBIQUITIN-CONJUGATING ENZYME 17 family protein CG_Chr07 - View
Citrullus lanatus ClCG08G014710 Ribosomal RNA small subunit methyltransferase I CG_Chr08 - View
Cucumis melo MELO3C016407.2 Ubiquitin-conjugating enzyme, E2 chr07 - View
Carica papaya Cpa.g.sc6.185 supercontig_6 - View
Capsella rubella Carub.0007s0390 K10688 - ubiquitin-conjugating enzyme E2 W (UBE2W, UBC16) scaffold_7 - View
Capsella rubella Carub.0002s2232 K10688 - ubiquitin-conjugating enzyme E2 W (UBE2W, UBC16) scaffold_2 + View
Cucumis sativus L. CsaV3_4G005420 Ubiquitin-conjugating enzyme E2 chr4 + View
Daucus carota DCAR_013835 hypothetical protein DCARv2_Chr4 + View
Daucus carota DCAR_022453 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv40034 GWHABJS00000014 + View
Davidia involucrata Dinv39461 GWHABJS00000011 - View
Durio zibethinus Duzib093G0172 NW_019167937.1 + View
Durio zibethinus Duzib147G1373 NW_019168470.1 - View
Durio zibethinus Duzib187G1572 NW_019167860.1 - View
Durio zibethinus Duzib116G0526 NW_019167949.1 - View
Durio zibethinus Duzib264G0034 NW_019167960.1 - View
Durio zibethinus Duzib041G0293 NW_019167826.1 - View
Erigeron canadensis ECA238G4009 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA232G3904 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA232G0271 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.F01602 Chr06 + View
Eucalyptus grandis Eucgr.I02390 Chr09 + View
Erythranthe guttata Migut.N03116 scaffold_14 - View
Erythranthe guttata Migut.C00772 scaffold_3 - View
Eutrema salsugineum Thhalv10026441m.g PTHR24067:SF155 - UBIQUITIN-CONJUGATING ENZYME E2 16-RELATED scaffold_1 - View
Eutrema salsugineum Thhalv10019254m.g PTHR24067:SF155 - UBIQUITIN-CONJUGATING ENZYME E2 16-RELATED scaffold_9 - View
Fragaria x ananassa FAN23G0522 K10688 - ubiquitin-conjugating enzyme E2 W (UBE2W, UBC16) Fvb1-3 - View
Gossypium hirsutum Gohir.D06G002700 2.1.1.198 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase D06 - View
Gossypium hirsutum Gohir.A02G168100 PTHR24067//PTHR24067:SF155 - UBIQUITIN-CONJUGATING ENZYME E2 // UBIQUITIN-CONJUGATING ENZYME E2 16-RELATED A02 - View
Gossypium hirsutum Gohir.A06G007600 2.1.1.198 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase A06 - View
Gossypium hirsutum Gohir.D03G011900 PTHR24067//PTHR24067:SF155 - UBIQUITIN-CONJUGATING ENZYME E2 // UBIQUITIN-CONJUGATING ENZYME E2 16-RELATED D03 + View
Gossypium hirsutum Gohir.A05G190000 K10688 - ubiquitin-conjugating enzyme E2 W (UBE2W, UBC16) A05 - View
Glycine max Glyma.04G029000 2.1.1.198 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Gm04 - View
Glycine max Glyma.11G073600 K10688 - ubiquitin-conjugating enzyme E2 W (UBE2W, UBC16) Gm11 + View
Glycine max Glyma.06G029000 K07056 - 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] (rsmI) Gm06 - View
Gossypium raimondii Gorai.009G198400 Chr09 - View
Gossypium raimondii Gorai.003G012200 Chr03 + View
Gossypium raimondii Gorai.010G007600 Chr10 - View
Helianthus annuus HanXRQChr14g0441461 Putative ubiquitin-conjugating enzyme/RWD-like HanXRQChr14 - View
Helianthus annuus HanXRQChr11g0325581 Putative ubiquitin-conjugating enzyme/RWD-like; Ubiquitin-conjugating enzyme, active site HanXRQChr11 - View
Lupinus albus Lalb_Chr16g0377661 PTHR24067//PTHR24067:SF155 - UBIQUITIN-CONJUGATING ENZYME E2 // UBIQUITIN-CONJUGATING ENZYME E2 16-RELATED Lalb_Chr16 - View
Lupinus albus Lalb_Chr09g0322031 PTHR24067:SF125 - UBIQUITIN-CONJUGATING ENZYME E2 18-RELATED Lalb_Chr09 - View
Lotus japonicus Lj1g0011689 2.1.1.198 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase chr1 - View
Lonicera japonica Lj4A33T81 GWHAAZE00000004 + View
Lonicera japonica Lj4C210T8 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_2_78101 K10688 - ubiquitin-conjugating enzyme E2 W (UBE2W, UBC16) Lsat_1_v8_lg_2 + View
Lactuca sativa Lsat_1_v5_gn_4_116601 PTHR24067:SF125 - UBIQUITIN-CONJUGATING ENZYME E2 18-RELATED Lsat_1_v8_lg_4 + View
Lactuca sativa Lsat_1_v5_gn_4_151381 K10688 - ubiquitin-conjugating enzyme E2 W (UBE2W, UBC16) Lsat_1_v8_lg_4 - View
Malus domestica MD02G1138000 ubiquitin-conjugating enzyme 18 Chr02 + View
Malus domestica MD15G1021600 Tetrapyrrole (Corrin/Porphyrin) Methylases Chr15 - View
Malus domestica MD15G1251800 ubiquitin-conjugating enzyme 18 Chr15 + View
Manihot esculenta Manes.05G154300 Chromosome05 - View
Manihot esculenta Manes.01G140800 Chromosome01 + View
Manihot esculenta Manes.02G098800 Chromosome02 - View
Manihot esculenta Manes.18G021412 Chromosome18 + View
Medicago truncatula Medtr3g112310 ribosomal RNA small subunit methyltransferase I chr3 + View
Medicago truncatula Medtr5g021260 ubiquitin-conjugating enzyme E2 chr5 + View
Nelumbo nucifera Nn5g29720 chr5 - View
Nicotiana tabacum Nitab4.5_0000723g0090 Ubiquitin-conjugating enzyme/RWD-like, Ubiquitin-conjugating enzyme, E2, Ubiquitin-conjugating enzyme, active site Nitab4.5_0000723 + View
Nicotiana tabacum Nitab4.5_0002221g0030 Ubiquitin-conjugating enzyme/RWD-like, Ubiquitin-conjugating enzyme, E2 Nitab4.5_0002221 - View
Punica granatum PGR119G0953 NC_045132.1 + View
Prunus persica Prupe.1G373400 K07056 - 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] (rsmI) Pp01 - View
Prunus persica Prupe.7G162600 K10688 - ubiquitin-conjugating enzyme E2 W (UBE2W, UBC16) Pp07 - View
Papaver somniferum PSO210G4775 NC_039359.1 + View
Papaver somniferum PSO170G5087 NC_039360.1 - View
Populus trichocarpa Potri.005G118600 PTHR24067//PTHR24067:SF155 - UBIQUITIN-CONJUGATING ENZYME E2 // UBIQUITIN-CONJUGATING ENZYME E2 16-RELATED Chr05 + View
Populus trichocarpa Potri.007G018700 PTHR24067//PTHR24067:SF155 - UBIQUITIN-CONJUGATING ENZYME E2 // UBIQUITIN-CONJUGATING ENZYME E2 16-RELATED Chr07 + View
Populus trichocarpa Potri.005G232100 PTHR24067:SF125 - UBIQUITIN-CONJUGATING ENZYME E2 18-RELATED Chr05 + View
Populus trichocarpa Potri.002G030701 2.1.1.198 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase Chr02 - View
Quercus lobata QL02p010181 CM012294 + View
Quercus lobata QL06p034867 6 + View
Quercus lobata QL10p007443 10 + View
Rhododendron simsii Rhsim07G0243600 chr07 - View
Rhododendron simsii Rhsim06G0028400 chr06 + View
Striga asiatica SGA_v2.0_scaffold11G05847 scaffold11 - View
Salvia bowleyana SalBow7G1285 GWHASIU00000005 - View
Salvia bowleyana SalBow8G3728 GWHASIU00000004 + View
Salvia bowleyana SalBow8G1622 GWHASIU00000004 + View
Salix brachista Sabra05G0097700 GWHAAZH00000005 + View
Salix brachista Sabra07G0015800 GWHAAZH00000007 + View
Salix brachista Sabra02G0024500 GWHAAZH00000002 - View
Simmondsia chinensis Sc03g0003250 GWHAASQ00000003 - View
Simmondsia chinensis Sc15g0007180 GWHAASQ00000015 - View
Sechium edule Sed0003163 LG07 - View
Solanum lycopersicum Solyc04g080800.4 Ribosomal RNA small subunit methyltransferase I (AHRD V3.3 *** A0A1J3HVJ1_NOCCA) SL4.0ch04 - View
Solanum lycopersicum Solyc02g084760.3 Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200QE21_9MAGN) SL4.0ch02 + View
Schrenkiella parvula Sp5g30590 K10688 - ubiquitin-conjugating enzyme E2 W (UBE2W, UBC16) ch5-7 + View
Schrenkiella parvula Sp7g34070 PTHR24067:SF155 - UBIQUITIN-CONJUGATING ENZYME E2 16-RELATED ch7-6 + View
Solanum pennellii Sopen04g034390 Tetrapyrrole (Corrin/Porphyrin) Methylases | FUNCTIONS IN: methyltransferase activity | INVOLVED IN: metabolic process | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0011, conserved site , Tetrapyrrole methylase , Tetrapyrrole methylase, subdomain 1 , Uncharacterised protein family UPF0011 Spenn-ch04 - View
Solanum pennellii Sopen02g029430 ubiquitin-conjugating enzyme 18 (UBC18) | FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity | INVOLVED IN: ubiquitin-dependent protein catabolic process | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like , Ubiquitin-conjugating enzyme, E2 | BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400003752 Uroporphyrin-III methyltransferase ST4.03ch04 - View
Solanum tuberosum PGSC0003DMG400003613 Ubiquitin carrier protein ST4.03ch02 + View
Selenicereus undatus Hund17199 Scaffold_33675 - View
Selenicereus undatus Hund14012 Scaffold_33679 - View
Selenicereus undatus Hund16458 Scaffold_33677 - View
Trochodendron aralioides TAR628G1547 group5 - View
Trochodendron aralioides TAR381G0609 group11 + View
Trochodendron aralioides TAR625G0040 group4 + View
Theobroma cacao Thecc.08G034400 Ubiquitin-conjugating enzyme family protein Chromosome_8 + View
Theobroma cacao Thecc.01G026700 Ubiquitin-conjugating enzyme 16 Chromosome_1 + View
Tarenaya hassleriana THA.LOC104804248 probable ubiquitin-conjugating enzyme E2 16 isoform X1 NW_010971389.1 - View
Tripterygium wilfordii TWI09G1479 NC_052245.1 + View
Tripterygium wilfordii TWI73G0288 NC_052232.1 - View
Tripterygium wilfordii TWI36G1643 NC_052237.1 + View
Vaccinium macrocarpon vmacro21685 Similar to UBC18: Probable ubiquitin-conjugating enzyme E2 18 (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro17727 Similar to UBC16: Probable ubiquitin-conjugating enzyme E2 16 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01009782001 chr18 - View
Vitis vinifera GSVIVG01018860001 chr4 - View