Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0015367 PREDICTED: E3 ubiquitin-protein ligase RLIM [Nicotiana sylvestris] Contig852 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G4230 LG-10 + View
Acer truncatum Atru.chr5.2416 chr5 + View
Actinidia chinensis Actinidia00391 Lachesis_group12 - View
Actinidia chinensis Actinidia34375 Lachesis_group2 - View
Avicennia marina MSTRG.20205 ScioBoG_26180_HRSCAF_26306 - View
Amaranthus hybridus Ah.14g085510 AmaHy_arrow1_Scaffold_14 - View
Aquilegia oxysepala Aqoxy6G02764 CHR06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.G2LGPB arahy.Tifrunner.gnm1.Arahy.19 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.S06R8C PTHR14155//PTHR14155:SF182 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.09 + View
Arabidopsis thaliana AT1G49850 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G15580.1)%3B Has 9155 Blast hits to 9129 proteins in 266 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 2526%3B Fungi - 625%3B Plants - 4723%3B Viruses - 8%3B Other Eukaryotes - 1269 (source: NCBI BLink). Chr1 - View
Brassica napus A08p03530 A08 + View
Beta vulgaris EL10Ac8g19359 PTHR14155//PTHR14155:SF182 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr8_EL10_PGA_scaffold4 - View
Cicer arietinum L. Ca_11049_v3 Ca_LG4_v3 + View
Coffea canephora Cc02_g19610 Putative RING/U-box superfamily protein chr2 - View
Citrus clementina Ciclev10028999m.g scaffold_8 + View
Ceratophyllum demersum CDE04G2252 2 + View
Carpinus fangiana Cfa004624 Cfa02 - View
Carya illinoinensis CiPaw.05G015100 PTHR14155//PTHR14155:SF182 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr05 - View
Citrullus lanatus ClCG02G006670 RING/U-box superfamily protein LENGTH=250 CG_Chr02 - View
Cucumis melo MELO3C018508.2 E3 ubiquitin-protein ligase RLIM chr01 - View
Corchorus olitorius COL.COLO4_32546 Zinc finger%2C RING-type AWUE01021130.1 + View
Cucumis sativus L. CsaV3_7G007960 E3 ubiquitin-protein ligase RLIM chr7 + View
Daucus carota DCAR_021966 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv42216 GWHABJS00000002 + View
Davidia involucrata Dinv15785 GWHABJS00000005 - View
Durio zibethinus Duzib052G0497 NW_019167849.1 + View
Durio zibethinus Duzib132G1164 NW_019167915.1 - View
Eucalyptus grandis Eucgr.I01080 Chr09 + View
Eutrema salsugineum Thhalv10011738m.g PTHR14155//PTHR14155:SF182 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED scaffold_7 + View
Fragaria x ananassa FAN20G3148 PTHR14155//PTHR14155:SF182 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb2-3 + View
Fragaria x ananassa FAN15G2588 PTHR14155//PTHR14155:SF182 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb2-4 + View
Fragaria vesca FvH4_2g04490 PTHR14155//PTHR14155:SF182 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb2 + View
Gossypium hirsutum Gohir.D12G020800 PTHR14155//PTHR14155:SF182 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED D12 + View
Gossypium hirsutum Gohir.D13G044300 PTHR14155//PTHR14155:SF182 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED D13 - View
Gossypium hirsutum Gohir.A12G020500 PTHR14155//PTHR14155:SF182 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED A12 + View
Gossypium hirsutum Gohir.A13G045300 PTHR14155//PTHR14155:SF182 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED A13 - View
Glycine max Glyma.10G259300 PTHR14155//PTHR14155:SF182 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm10 + View
Glycine max Glyma.20G131600 PTHR14155//PTHR14155:SF182 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm20 - View
Gossypium raimondii Gorai.013G049100 Chr13 - View
Gossypium raimondii Gorai.008G021100 Chr08 + View
Helianthus annuus HanXRQChr16g0509101 Putative zinc finger, RING/FYVE/PHD-type HanXRQChr16 + View
Hydrangea macrophylla Hma1.2p1_1174F.1_g263885 Hma1.2p1_1174F.1 + View
Lupinus albus Lalb_Chr02g0145131 PTHR14155//PTHR14155:SF182 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lalb_Chr02 + View
Lotus japonicus Lj5g0021642 PTHR14155//PTHR14155:SF182 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED chr5 - View
Lonicera japonica Lj5A217T99 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_5_116300 PTHR14155//PTHR14155:SF182 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lsat_1_v8_lg_5 - View
Malus domestica MD05G1095900 RING/U-box superfamily protein Chr05 - View
Malus domestica MD10G1102100 RING/U-box superfamily protein Chr10 - View
Manihot esculenta Manes.10G074800 Chromosome10 + View
Manihot esculenta Manes.07G063200 Chromosome07 + View
Medicago truncatula Medtr1g106815 C3HC4-type RING zinc finger protein chr1 + View
Nelumbo nucifera Nn1g04628 chr1 + View
Nelumbo nucifera Nn5g30503 chr5 - View
Nicotiana tabacum Nitab4.5_0001105g0180 Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0001105 + View
Nicotiana tabacum Nitab4.5_0004685g0090 Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0004685 - View
Olea europaea Oeu013766.1 chr15 - View
Olea europaea Oeu009679.2 chr3 + View
Olea europaea Oeu010414.1 chr15 - View
Oryza sativa ssp. japonica Os03g0206900 Zinc finger, RING/FYVE/PHD-type domain containing protein. chr03 + View
Oryza sativa ssp. japonica Os12g0580700 Similar to RING-H2 finger protein ATL2N. chr12 + View
Petunia axillaris Peaxi162Scf00016g02625 RING/U-box superfamily protein, putative isoform 1 Peaxi162Scf00016 - View
Punica granatum PGR142G3697 NC_045128.1 - View
Prunus persica Prupe.8G140300 Pp08 - View
Pisum sativum Psat6g216000 Ring finger domain chr6LG2 - View
Papaver somniferum PSO541G0847 NC_039363.1 - View
Papaver somniferum PSO675G6941 NC_039358.1 - View
Populus trichocarpa Potri.009G091200 PTHR14155//PTHR14155:SF182 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr09 + View
Populus trichocarpa Potri.001G297000 PTHR14155//PTHR14155:SF182 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr01 + View
Phaseolus vulgaris Phvul.007G042900 PTHR14155//PTHR14155:SF182 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr07 - View
Quercus lobata QL11p032003 11 + View
Rosa chinensis RcHm_v2.0_Chr6g0253981 RcHm_v2.0_Chr6 + View
Rhododendron simsii RhsimUnG0126100 ctg322 + View
Rhododendron simsii Rhsim11G0154900 chr11 + View
Striga asiatica SGA_v2.0_scaffold225G43010 scaffold225 - View
Salix brachista Sabra16G0186100 GWHAAZH00000016 + View
Salix brachista Sabra09G0070500 GWHAAZH00000009 + View
Simmondsia chinensis Sc14g0002590 GWHAASQ00000014 + View
Sechium edule Sed0028168 LG10 + View
Solanum lycopersicum Solyc01g107290.3 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1QJN2_ARTAN) SL4.0ch01 + View
Solanum pennellii Sopen01g049540 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400025755 RING-H2 finger protein ST4.03ch01 + View
Trochodendron aralioides TAR625G0396 group4 - View
Trochodendron aralioides TAR628G1008 group5 + View
Trochodendron aralioides TAR381G0393 group11 - View
Theobroma cacao Thecc.02G113300 RING/U-box superfamily protein Chromosome_2 - View
Trifolium pratense TPR.G27105 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI14G1347 NC_052249.1 - View
Tripterygium wilfordii TWI59G0948 NC_052248.1 - View
Vaccinium macrocarpon vmacro01978 Protein of unknown function chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G2443 CM024071.1 + View
Vitis vinifera GSVIVG01037874001 chr3 - View
Zea mays Zm00001eb030010 Zm00001e003044 Zinc finger, C3HC4 type family protein Probable E3 ubiquitin-protein ligase RHY1A 1 - View