Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0009860 PREDICTED: protein STICHEL-like 3 isoform X1 [Vitis vinifera] Contig1177 + View
CSS0029612 PREDICTED: protein STICHEL-like 3 isoform X1 [Vitis vinifera] Chr8 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G7340 LG-9 + View
Aethionema arabicum Aa31LG6G1530 LG-6 + View
Acer truncatum Atru.chr10.1552 chr10 - View
Actinidia chinensis Actinidia35607 Lachesis_group2 + View
Actinidia chinensis Actinidia07653 Lachesis_group6 - View
Actinidia chinensis Actinidia39523 Lachesis_group17 + View
Arabidopsis lyrata AL7G35420 scaffold_7 - View
Arabidopsis lyrata AL8G12920 scaffold_8 + View
Avicennia marina MSTRG.13236 ScioBoG_17730_HRSCAF_17811 + View
Aquilegia oxysepala Aqoxy4G00234 CHR04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.GAN3W4 PF12169//PF13177 - DNA polymerase III subunits gamma and tau domain III (DNA_pol3_gamma3) // DNA polymerase III, delta subunit (DNA_pol3_delta2) arahy.Tifrunner.gnm1.Arahy.10 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.GTV6YM PF12169//PF13177 - DNA polymerase III subunits gamma and tau domain III (DNA_pol3_gamma3) // DNA polymerase III, delta subunit (DNA_pol3_delta2) arahy.Tifrunner.gnm1.Arahy.20 - View
Arabidopsis thaliana AT4G18820 AAA-type ATPase family protein AAA-type ATPase family protein%3B FUNCTIONS IN: nucleoside-triphosphatase activity%2C DNA-directed DNA polymerase activity%2C DNA binding%2C nucleotide binding%2C ATP binding%3B INVOLVED IN: DNA replication%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%2C ATPase%2C AAA-type%2C core (InterPro:IPR003959)%2C DNA polymerase III%2C clamp loader complex%2C gamma/delta/delta subunit%2C C-terminal (InterPro:IPR008921)%2C DNA polymerase III%2C subunit gamma/ tau (InterPro:IPR012763)%3B BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT5G45720.1)%3B Has 12659 Blast hits to 12635 proteins in 2803 species: Archae - 377%3B Bacteria - 7447%3B Metazoa - 406%3B Fungi - 391%3B Plants - 312%3B Viruses - 22%3B Other Eukaryotes - 3704 (source: NCBI BLink). Chr4 + View
Amborella trichopoda ATR0012G006 AmTr_v1.0_scaffold00130 - View
Brassica carinata BcaC04g21747 ChrC04 + View
Brassica carinata BcaC06g31521 ChrC06 + View
Brassica carinata BcaC06g34409 ChrC06 + View
Brassica carinata BcaB07g30871 ChrB07 + View
Brassica napus C01p12860 C01 + View
Brassica napus C09p28060 C09 - View
Brassica napus A01p10850 A01 + View
Brassica napus A06p46420 A06 + View
Brassica napus C07p29000 C07 - View
Brassica oleracea BolC1t01262H C1 + View
Brassica oleracea BolC7t43439H C7 - View
Brassica rapa BraA09t37792Z A09 - View
Brassica rapa BraA06t27506Z A06 + View
Brassica rapa BraA01t01032Z A01 + View
Capsicum annuum CAN.G411.42 PGAv.1.6.scaffold411 - View
Cicer arietinum L. Ca_00474_v3 Ca_LG1_v3 + View
Corylus avellana Haze_05390 Similar to At4g18820: Protein STICHEL-like 3 (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc02_g15690 Putative AAA-type ATPase family protein chr2 + View
Citrus clementina Ciclev10014075m.g scaffold_2 + View
Ceratophyllum demersum CDE04G2419 2 - View
Carpinus fangiana Cfa001104 Cfa01 + View
Cardamine hirsuta CARHR176250 Replication factor C / DNA polymerase III gamma-tau subunit, putative Chr6 + View
Cardamine hirsuta CARHR225680 Replication factor C / DNA polymerase III gamma-tau subunit, putative Chr7 + View
Carya illinoinensis CiPaw.09G136800 PTHR11669//PTHR11669:SF16 - REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT // PROTEIN STICHEL-LIKE 3-RELATED Chr09 - View
Carya illinoinensis CiPaw.10G103700 PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED Chr10 - View
Citrullus lanatus ClCG01G023950 DNA polymerase III gamma-tau subunit CG_Chr01 + View
Cucumis melo MELO3C007194.2 DNA polymerase III gamma-tau subunit chr08 - View
Carica papaya Cpa.g.sc7.115 supercontig_7 - View
Chenopodium quinoa AUR62039487 At4g18820: Protein STICHEL-like 3 C_Quinoa_Scaffold_1037 + View
Chenopodium quinoa AUR62041813 At4g18820: Protein STICHEL-like 3 C_Quinoa_Scaffold_4338 - View
Capsella rubella Carub.0008s0227 PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED scaffold_8 + View
Capsella rubella Carub.0007s2241 PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED scaffold_7 - View
Cucumis sativus L. CsaV3_6G051090 Protein stichel-like 3 chr6 + View
Daucus carota DCAR_005162 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_027972 hypothetical protein DCARv2_Chr8 + View
Davidia involucrata Dinv12743 GWHABJS00000020 - View
Davidia involucrata Dinv32331 GWHABJS00000016 - View
Durio zibethinus Duzib192G1074 NW_019168037.1 + View
Durio zibethinus Duzib160G0611 NW_019168015.1 - View
Durio zibethinus Duzib235G0195 NW_019167982.1 - View
Erigeron canadensis ECA234G3008 Conyza_canadensis_scaffold:4 + View
Eucalyptus grandis Eucgr.D00435 Chr04 - View
Erythranthe guttata Migut.H01406 scaffold_8 - View
Eutrema salsugineum Thhalv10024266m.g PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED scaffold_1 - View
Eutrema salsugineum Thhalv10000763m.g PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED scaffold_20 - View
Fragaria x ananassa FAN25G2492 PTHR11669//PTHR11669:SF16 - REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT // PROTEIN STICHEL-LIKE 3-RELATED Fvb3-1 + View
Fragaria x ananassa FAN11G0143 PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED Fvb3-4 + View
Fragaria x ananassa FAN21G1686 PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED Fvb3-2 - View
Fragaria x ananassa FAN16G0685 PTHR11669//PTHR11669:SF16 - REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT // PROTEIN STICHEL-LIKE 3-RELATED Fvb3-3 - View
Fragaria vesca FvH4_3g07230 PF12169//PF13177 - DNA polymerase III subunits gamma and tau domain III (DNA_pol3_gamma3) // DNA polymerase III, delta subunit (DNA_pol3_delta2) Fvb3 - View
Gossypium hirsutum Gohir.D10G034800 PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED D10 - View
Gossypium hirsutum Gohir.A06G199200 PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED A06 - View
Gossypium hirsutum Gohir.D06G206500 PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED D06 - View
Gossypium hirsutum Gohir.A10G034100 PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED A10 - View
Glycine max Glyma.13G226500 PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED Gm13 - View
Glycine max Glyma.15G085900 PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED Gm15 + View
Gossypium raimondii Gorai.010G240900 Chr10 - View
Gossypium raimondii Gorai.011G036600 Chr11 - View
Hydrangea macrophylla Hma1.2p1_0508F.1_g168710 Hma1.2p1_0508F.1 - View
Lupinus albus Lalb_Chr18g0054791 PTHR11669//PTHR11669:SF16 - REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT // PROTEIN STICHEL-LIKE 3-RELATED Lalb_Chr18 + View
Lupinus albus Lalb_Chr15g0086351 PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED Lalb_Chr15 + View
Lotus japonicus Lj6g0025795 PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED chr6 - View
Lonicera japonica Lj1A1176T61 GWHAAZE00000001 + View
Lonicera japonica Lj2A317G40 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_4_48381 PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED Lsat_1_v8_lg_4 - View
Magnolia biondii MBI07_g00451_MAGBIO AED:0.19 Chr07 - View
Magnolia biondii MBI06_g18695_MAGBIO AED:0.44 Chr06 - View
Malus domestica MD00G1008200 AAA-type ATPase family protein Chr00 - View
Malus domestica MD10G1274700 AAA-type ATPase family protein Chr10 - View
Manihot esculenta Manes.17G059900 Chromosome17 + View
Manihot esculenta Manes.16G042500 Chromosome16 + View
Medicago truncatula Medtr2g017980 DNA polymerase III subunit gamma/tau chr2 + View
Nelumbo nucifera Nn6g34481 chr6 + View
Nelumbo nucifera Nn3g21089 chr3 + View
Olea europaea Oeu040926.1 chr13 + View
Olea europaea Oeu039873.1 chr16 - View
Olea europaea Oeu043121.2 chr19 + View
Petunia axillaris Peaxi162Scf00112g00048 DNA polymerase III subunit gamma/tau Peaxi162Scf00112 + View
Prunus persica Prupe.4G067700 PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED Pp04 + View
Pisum sativum Psat1g194560 DNA polymerase III + delta subunit chr1LG6 - View
Populus trichocarpa Potri.004G061700 PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED Chr04 + View
Populus trichocarpa Potri.011G071300 PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED Chr11 + View
Phaseolus vulgaris Phvul.006G172900 PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED Chr06 - View
Quercus lobata QL05p050035 5 + View
Rosa chinensis RcHm_v2.0_Chr5g0011921 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim13G0187200 chr13 - View
Salvia bowleyana SalBow7G4755 GWHASIU00000005 + View
Salvia bowleyana SalBow8G2953 GWHASIU00000004 + View
Salix brachista Sabra11G0055900 GWHAAZH00000011 + View
Simmondsia chinensis Sc05g0006830 GWHAASQ00000005 - View
Sechium edule Sed0022889 LG10 - View
Sechium edule Sed0001864 LG14 + View
Solanum lycopersicum Solyc02g072090.2 DNA polymerase III gamma-tau subunit (AHRD V3.3 *** E5GC26_CUCME) SL4.0ch02 - View
Schrenkiella parvula Sp2g10610 PTHR11669//PTHR11669:SF16 - REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT // PROTEIN STICHEL-LIKE 3-RELATED ch2-4 - View
Schrenkiella parvula Sp7g17530 PTHR11669//PTHR11669:SF16 - REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT // PROTEIN STICHEL-LIKE 3-RELATED ch7-4 + View
Solanum pennellii Sopen02g021050 AAA-type ATPase family protein | FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, ATP binding | INVOLVED IN: DNA replication | LOCATED IN: plasma membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core , ATPase, AAA-type, core , DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal , DNA polymerase III, subunit gamma/ tau | BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400028463 Replication factor C / DNA polymerase III gamma-tau subunit ST4.03ch02 - View
Selenicereus undatus Hund21450 Scaffold_33680 + View
Trochodendron aralioides TAR624G1016 group9 - View
Trochodendron aralioides TAR626G1395 group3 + View
Theobroma cacao Thecc.06G164600 AAA-type ATPase family protein Chromosome_6 - View
Tarenaya hassleriana THA.LOC104798436 protein STICHEL-like 3 NW_010967966.1 + View
Trifolium pratense TPR.G4468 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI09G0472 NC_052245.1 + View
Tripterygium wilfordii TWI53G0488 NC_052244.1 + View
Vaccinium macrocarpon vmacro04000 Similar to At4g18820: Protein STICHEL-like 3 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0540G0601 CM024075.1 + View
Vitis vinifera GSVIVG01021264001 chr10 + View