Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0000993 hypothetical protein CICLE_v10032536mg [Citrus clementina] Chr10 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G9590 LG-7 - View
Acer truncatum Atru.chr11.2209 chr11 - View
Acer truncatum Atru.chr9.1002 chr9 - View
Actinidia chinensis Actinidia08104 Lachesis_group15 + View
Actinidia chinensis Actinidia30690 Lachesis_group10 + View
Actinidia chinensis Actinidia36785 Lachesis_group9 + View
Arabidopsis lyrata AL1G24880 scaffold_1 - View
Avicennia marina MSTRG.539 ScioBoG_102831_HRSCAF_103044 + View
Avicennia marina MSTRG.7961 ScioBoG_102841_HRSCAF_103114 - View
Amaranthus hybridus Ah.02g130480 AmaHy_arrow1_Scaffold_2 + View
Amaranthus hybridus Ah.03g133690 AmaHy_arrow1_Scaffold_3 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0093F6 PTHR15315:SF35 - F21J9.10 arahy.Tifrunner.gnm1.Arahy.10 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.G3RHVP PTHR15315:SF35 - F21J9.10 arahy.Tifrunner.gnm1.Arahy.20 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WF23H8 PTHR15315:SF35 - F21J9.10 arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT1G24440 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G13195.1)%3B Has 869 Blast hits to 869 proteins in 155 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 288%3B Fungi - 71%3B Plants - 339%3B Viruses - 31%3B Other Eukaryotes - 140 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G13195 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G24440.1)%3B Has 912 Blast hits to 912 proteins in 122 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 381%3B Fungi - 25%3B Plants - 358%3B Viruses - 17%3B Other Eukaryotes - 131 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR0824G249 AmTr_v1.0_scaffold00049 - View
Brassica carinata BcaC05g26526 ChrC05 - View
Brassica carinata BcaC05g25076 ChrC05 + View
Brassica carinata BcaC05g26721 ChrC05 - View
Brassica carinata BcaB03g12059 ChrB03 - View
Brassica carinata BcaC06g35264 ChrC06 + View
Brassica napus C05p10150 C05 + View
Brassica napus A07p12100 A07 + View
Brassica napus C03p73470 C03 - View
Brassica napus C07p18060 C07 + View
Brassica oleracea BolC5t31304H C5 - View
Brassica oleracea BolC5t29761H C5 + View
Brassica oleracea BolC8t52211H C8 + View
Brassica oleracea BolC3t19642H C3 - View
Brassica rapa BraA07t28998Z A07 + View
Brassica rapa BraA09t39384Z A09 + View
Beta vulgaris EL10As2g23232 PTHR15315:SF35 - F21J9.10 Scaffold_0002 - View
Capsicum annuum CAN.G49.5 PGAv.1.6.scaffold49 + View
Cannabis sativa CANSAT01G2916 NC_044373.1 - View
Cicer arietinum L. Ca_25117_v3 Ca_LG8_v3 + View
Corylus avellana Haze_12312 Similar to AIRP2: E3 ubiquitin-protein ligase AIRP2 (Arabidopsis thaliana OX%3D3702) 9 - View
Corylus avellana Haze_07282 Similar to AIRP2: E3 ubiquitin-protein ligase AIRP2 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc11_g16300 RING/U-box superfamily protein chr11 - View
Coffea canephora Cc04_g10500 RING/U-box superfamily protein chr4 + View
Citrus clementina Ciclev10032536m.g scaffold_4 - View
Carpinus fangiana Cfa018897 Cfa08 + View
Carpinus fangiana Cfa009279 Cfa03 - View
Cardamine hirsuta CARHR026690 RING finger protein Chr1 - View
Carya illinoinensis CiPaw.05G175200 PTHR15315//PTHR15315:SF22 - RING FINGER PROTEIN 41, 151 // SUBFAMILY NOT NAMED Chr05 - View
Carya illinoinensis CiPaw.11G012800 PTHR15315//PTHR15315:SF32 - RING FINGER PROTEIN 41, 151 // SUBFAMILY NOT NAMED Chr11 + View
Carya illinoinensis CiPaw.12G035500 PTHR15315//PTHR15315:SF32 - RING FINGER PROTEIN 41, 151 // SUBFAMILY NOT NAMED Chr12 - View
Citrullus lanatus ClCG05G026200 RING finger protein CG_Chr05 - View
Citrullus lanatus ClCG08G017470 RING finger protein CG_Chr08 - View
Cucumis melo MELO3C011907.2 RING finger protein chr10 - View
Cucumis melo MELO3C010712.2 RING finger protein chr03 - View
Corchorus olitorius COL.COLO4_23557 hypothetical protein AWUE01018264.1 - View
Carica papaya Cpa.g.sc4.65 supercontig_4 - View
Chenopodium quinoa AUR62005546 Protein of unknown function C_Quinoa_Scaffold_1214 - View
Capsella rubella Carub.0001s2567 PTHR15315:SF35 - F21J9.10 scaffold_1 - View
Cucumis sativus L. CsaV3_1G009260 RING finger protein chr1 - View
Cucumis sativus L. CsaV3_5G030620 RING finger protein chr5 - View
Cucumis sativus L. CsaV3_2G025150 RING finger protein chr2 + View
Daucus carota DCAR_026490 hypothetical protein DCARv2_Chr8 - View
Daucus carota DCAR_007025 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv11019 GWHABJS00000008 - View
Davidia involucrata Dinv14776 GWHABJS00000018 - View
Davidia involucrata Dinv38478 GWHABJS00000019 - View
Durio zibethinus Duzib268G1742 NW_019168270.1 - View
Durio zibethinus Duzib205G1544 NW_019168381.1 - View
Durio zibethinus Duzib251G0364 NW_019167971.1 - View
Durio zibethinus Duzib248G0663 NW_019168048.1 + View
Erigeron canadensis ECA232G1545 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA233G3225 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA234G3430 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.H04695 Chr08 - View
Eucalyptus grandis Eucgr.B03230 Chr02 + View
Erythranthe guttata Migut.K00675 scaffold_11 - View
Eutrema salsugineum Thhalv10008563m.g PTHR15315:SF35 - F21J9.10 scaffold_5 + View
Fragaria x ananassa FAN07G1976 PTHR15315//PTHR15315:SF35 - RING FINGER PROTEIN 41, 151 // F21J9.10 Fvb4-4 - View
Fragaria x ananassa FAN13G2260 PTHR15315//PTHR15315:SF32 - RING FINGER PROTEIN 41, 151 // SUBFAMILY NOT NAMED Fvb5-2 - View
Fragaria x ananassa FAN17G2582 PTHR15315//PTHR15315:SF35 - RING FINGER PROTEIN 41, 151 // F21J9.10 Fvb4-2 - View
Fragaria x ananassa FAN12G1615 PTHR15315//PTHR15315:SF35 - RING FINGER PROTEIN 41, 151 // F21J9.10 Fvb4-3 - View
Fragaria x ananassa FAN04G2232 PTHR15315//PTHR15315:SF32 - RING FINGER PROTEIN 41, 151 // SUBFAMILY NOT NAMED Fvb5-4 - View
Fragaria x ananassa FAN08G2821 PTHR15315//PTHR15315:SF32 - RING FINGER PROTEIN 41, 151 // SUBFAMILY NOT NAMED Fvb5-3 + View
Fragaria x ananassa FAN22G2158 PTHR15315//PTHR15315:SF22 - RING FINGER PROTEIN 41, 151 // SUBFAMILY NOT NAMED Fvb4-1 - View
Gossypium hirsutum Gohir.A12G146700 PTHR15315:SF35 - F21J9.10 A12 - View
Gossypium hirsutum Gohir.D04G180800 PTHR15315//PTHR15315:SF22 - RING FINGER PROTEIN 41, 151 // SUBFAMILY NOT NAMED D04 + View
Gossypium hirsutum Gohir.A04G137600 PTHR15315//PTHR15315:SF22 - RING FINGER PROTEIN 41, 151 // SUBFAMILY NOT NAMED A04 + View
Gossypium hirsutum Gohir.D12G151300 PTHR15315:SF35 - F21J9.10 D12 - View
Glycine max Glyma.05G144300 PTHR15315:SF35 - F21J9.10 Gm05 - View
Glycine max Glyma.08G100700 PTHR15315:SF35 - F21J9.10 Gm08 - View
Glycine max Glyma.05G044700 PTHR15315:SF35 - F21J9.10 Gm05 - View
Glycine max Glyma.18G010900 KOG1039//KOG4172 - Predicted E3 ubiquitin ligase // Predicted E3 ubiquitin ligase Gm18 - View
Glycine max Glyma.11G246100 PTHR15315:SF35 - F21J9.10 Gm11 - View
Gossypium raimondii Gorai.008G162800 Chr08 - View
Gossypium raimondii Gorai.012G174000 Chr12 + View
Helianthus annuus HanXRQChr12g0372121 Putative zinc finger, RING/FYVE/PHD-type HanXRQChr12 - View
Helianthus annuus HanXRQChr08g0207291 Probable RING/U-box superfamily protein HanXRQChr08 - View
Helianthus annuus HanXRQChr17g0569241 Putative zinc finger, RING/FYVE/PHD-type HanXRQChr17 - View
Lupinus albus Lalb_Chr23g0277821 PTHR15315:SF35 - F21J9.10 Lalb_Chr23 - View
Lupinus albus Lalb_Chr07g0187171 PTHR15315//PTHR15315:SF35 - RING FINGER PROTEIN 41, 151 // F21J9.10 Lalb_Chr07 - View
Lotus japonicus Lj4g0004637 PTHR15315//PTHR15315:SF35 - RING FINGER PROTEIN 41, 151 // F21J9.10 chr4 + View
Lotus japonicus Lj4g0005954 PTHR15315//PTHR15315:SF35 - RING FINGER PROTEIN 41, 151 // F21J9.10 chr4 - View
Lotus japonicus Lj6g0010674 PTHR15315:SF35 - F21J9.10 chr6 - View
Lonicera japonica Lj6A818G49 GWHAAZE00000006 - View
Lonicera japonica Lj3A1063T62 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_8_150380 Lsat_1_v8_lg_8 + View
Malus domestica MD16G1107800 RING/U-box superfamily protein Chr16 - View
Malus domestica MD06G1157700 RING/U-box superfamily protein Chr06 + View
Malus domestica MD13G1107900 RING/U-box superfamily protein Chr13 - View
Manihot esculenta Manes.06G114700 Chromosome06 - View
Manihot esculenta Manes.12G018000 Chromosome12 + View
Manihot esculenta Manes.13G013100 Chromosome13 - View
Manihot esculenta Manes.14G055500 Chromosome14 + View
Medicago truncatula Medtr8g079910 RING finger protein chr8 - View
Medicago truncatula Medtr3g086130 ubiquitin-protein ligase chr3 + View
Nelumbo nucifera Nn3g16585 chr3 - View
Nicotiana tabacum Nitab4.5_0000041g0300 Zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-type, Zinc finger, RING-type, conserved site Nitab4.5_0000041 - View
Olea europaea Oeu059786.1 chr1 + View
Olea europaea Oeu038658.1 chr12 + View
Oryza sativa ssp. japonica Os01g0905700 Zinc finger, RING/FYVE/PHD-type domain containing protein. chr01 + View
Petunia axillaris Peaxi162Scf00128g00726 RING/U-box superfamily protein Peaxi162Scf00128 - View
Petunia axillaris Peaxi162Scf00089g00717 RING/U-box superfamily protein Peaxi162Scf00089 + View
Punica granatum PGR119G1715 NC_045132.1 - View
Punica granatum PGR102G1403 NC_045129.1 + View
Prunus persica Prupe.1G238300 PTHR15315//PTHR15315:SF22 - RING FINGER PROTEIN 41, 151 // SUBFAMILY NOT NAMED Pp01 - View
Prunus persica Prupe.5G157700 Pp05 + View
Pisum sativum Psat5g093560 Zinc finger RING-type signature. chr5LG3 - View
Papaver somniferum PSO063G0055 NC_039364.1 - View
Populus trichocarpa Potri.010G052700 PTHR15315:SF35 - F21J9.10 Chr10 - View
Populus trichocarpa Potri.008G181300 PTHR15315:SF35 - F21J9.10 Chr08 + View
Populus trichocarpa Potri.012G093300 PTHR15315//PTHR15315:SF32 - RING FINGER PROTEIN 41, 151 // SUBFAMILY NOT NAMED Chr12 + View
Populus trichocarpa Potri.015G089800 PTHR15315//PTHR15315:SF32 - RING FINGER PROTEIN 41, 151 // SUBFAMILY NOT NAMED Chr15 - View
Phaseolus vulgaris Phvul.001G257800 PTHR15315:SF35 - F21J9.10 Chr01 - View
Phaseolus vulgaris Phvul.003G208101 PTHR15315:SF35 - F21J9.10 Chr03 - View
Phaseolus vulgaris Phvul.002G177300 PTHR15315:SF35 - F21J9.10 Chr02 + View
Rosa chinensis RcHm_v2.0_Chr4g0431951 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim12G0037100 chr12 + View
Rhododendron simsii Rhsim12G0107600 chr12 - View
Rhododendron simsii Rhsim12G0171700 chr12 - View
Salvia bowleyana SalBow2G0341 GWHASIU00000007 - View
Salix brachista Sabra12G0068000 GWHAAZH00000012 + View
Salix brachista Sabra10G0017500 GWHAAZH00000010 - View
Salix brachista Sabra08G0138400 GWHAAZH00000008 + View
Simmondsia chinensis Sc11g0000780 GWHAASQ00000011 + View
Simmondsia chinensis Sc04g0009870 GWHAASQ00000004 + View
Simmondsia chinensis Sc04g0000990 GWHAASQ00000004 + View
Sechium edule Sed0019317 LG06 - View
Sechium edule Sed0018721 LG04 + View
Sapria himalayana SHI17905 scaffold23_8152026 - View
Solanum lycopersicum Solyc03g111510.3 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1NQ36_ARTAN) SL4.0ch03 + View
Solanum lycopersicum Solyc05g014230.3 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1NQ36_ARTAN) SL4.0ch05 - View
Schrenkiella parvula Sp1g23360 PTHR15315//PTHR15315:SF35 - RING FINGER PROTEIN 41, 151 // F21J9.10 ch1-1 - View
Solanum pennellii Sopen05g009250 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch05 - View
Solanum pennellii Sopen03g030650 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400010745 Ubiquitin-protein ligase ST4.03ch05 - View
Solanum tuberosum PGSC0003DMG400015235 Ubiquitin-protein ligase ST4.03ch03 + View
Selenicereus undatus Hund25425 Scaffold_3410 - View
Trochodendron aralioides TAR622G1252 group8 - View
Trochodendron aralioides TAR374G0894 group12 - View
Theobroma cacao Thecc.02G269700 RING/U-box superfamily protein Chromosome_2 - View
Theobroma cacao Thecc.03G122100 RING/U-box superfamily protein Chromosome_3 - View
Tarenaya hassleriana THA.LOC104825533 uncharacterized protein LOC104825533 NW_010967396.1 + View
Tripterygium wilfordii TWI39G0279 NC_052250.1 - View
Tripterygium wilfordii TWI36G0289 NC_052237.1 + View
Tripterygium wilfordii TWI18G0809 NC_052241.1 - View
Utricularia gibba unitig_699.g19942 unitig_699 - View
Utricularia gibba unitig_22.g6419 unitig_22 + View
Vaccinium macrocarpon vmacro16705 Similar to AIRP2: E3 ubiquitin-protein ligase AIRP2 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro01098 Similar to AIRP2: E3 ubiquitin-protein ligase AIRP2 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro16151 Similar to AIRP2: E3 ubiquitin-protein ligase AIRP2 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G2022 CM024070.1 - View
Vigna mungo VMungo1215G1001 CM024074.1 + View
Vigna mungo VMungo0251G1312 CM024069.1 - View
Vitis vinifera GSVIVG01007553001 chr17 - View
Vitis vinifera GSVIVG01010297001 chr1 - View
Zea mays Zm00001eb144260 Zm00001e018924 RING/U-box superfamily protein 3 - View