Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0008478 PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Vitis vinifera] Chr5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G120 LG-8 + View
Acer truncatum Atru.chr1.187 chr1 - View
Actinidia chinensis Actinidia12780 Lachesis_group19 + View
Arabidopsis lyrata AL3G24560 scaffold_3 + View
Avicennia marina MSTRG.14549 ScioBoG_18782_HRSCAF_18867 - View
Avicennia marina MSTRG.7065 ScioBoG_102840_HRSCAF_103099 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.9Y5DYJ PTHR31717//PTHR31717:SF9 - FAMILY NOT NAMED // ACTIVATOR OF SPORAMIN LUC 2 arahy.Tifrunner.gnm1.Arahy.07 - View
Arabidopsis thaliana AT3G12890 activator of spomin::LUC2 Encodes a protein belonging to a class of CCT (CONSTANS%2C CONSTANS-like%2C TOC1) domain proteins. The protein contains a 43 amino acid-long sequence with high homology to the CCT domain but does not have any B-box or GATA-type zinc finger domains. Functions as a transcriptional activator and regulates the expression of at least a subset of sugar-inducible genes. activator of spomin::LUC2 (ASML2)%3B CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402)%3B BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT5G41380.1)%3B Has 1405 Blast hits to 1405 proteins in 99 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1344%3B Viruses - 0%3B Other Eukaryotes - 61 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC05g29229 ChrC05 - View
Brassica carinata BcaC09g48274 ChrC09 + View
Brassica carinata BcaB06g25503 ChrB06 - View
Brassica carinata BcaC01g04040 ChrC01 + View
Brassica napus A01p40650 A01 - View
Brassica napus C05p55040 C05 - View
Brassica napus A05p36610 A05 - View
Brassica napus C01p52260 C01 - View
Brassica oleracea BolC1t05165H C1 - View
Brassica oleracea BolC3t16868H C3 + View
Brassica oleracea BolC5t34172H C5 - View
Brassica rapa BraA01t04099Z A01 - View
Brassica rapa BraA05t22462Z A05 - View
Capsicum annuum CAN.G943.43 PGAv.1.6.scaffold943 - View
Cannabis sativa CANSAT80G0834 NC_044372.1 + View
Cicer arietinum L. Ca_03657_v3 Ca_LG1_v3 + View
Coffea canephora Cc05_g16220 Putative uncharacterized protein chr5 - View
Citrus clementina Ciclev10005692m.g scaffold_9 - View
Ceratophyllum demersum CDE06G2614 4 - View
Carpinus fangiana Cfa019414 Cfa08 - View
Cardamine hirsuta CARHR087410 CCT motif family protein Chr3 + View
Carya illinoinensis CiPaw.11G062200 PTHR31717:SF9 - ACTIVATOR OF SPORAMIN LUC 2 Chr11 + View
Citrullus lanatus ClCG02G018550 activator of spomin::LUC2 LENGTH=251 CG_Chr02 - View
Citrullus lanatus ClCG09G022600 CCT motif family protein CG_Chr09 - View
Cucumis melo MELO3C012623.2 Zinc finger protein CONSTANS chr01 + View
Cucumis melo MELO3C019654.2 Zinc finger protein CONSTANS chr11 - View
Cucumis sativus L. CsaV3_7G022750 Zinc finger protein CONSTANS chr7 - View
Cucumis sativus L. CsaV3_6G013650 Zinc finger protein CONSTANS chr6 + View
Daucus carota DCAR_013732 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv42503 GWHABJS00000013 + View
Davidia involucrata Dinv19607 GWHABJS00000001 - View
Durio zibethinus Duzib213G0490 NW_019167993.1 - View
Erigeron canadensis ECA236G3534 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.F01466 Chr06 - View
Erythranthe guttata Migut.M01547 scaffold_13 + View
Eutrema salsugineum Thhalv10022310m.g PTHR31717:SF9 - ACTIVATOR OF SPORAMIN LUC 2 scaffold_13 - View
Fragaria x ananassa FAN11G1453 PTHR31717:SF9 - ACTIVATOR OF SPORAMIN LUC 2 Fvb3-4 - View
Fragaria x ananassa FAN16G2793 PTHR31717//PTHR31717:SF9 - FAMILY NOT NAMED // ACTIVATOR OF SPORAMIN LUC 2 Fvb3-3 + View
Fragaria x ananassa FAN25G3067 PTHR31717//PTHR31717:SF9 - FAMILY NOT NAMED // ACTIVATOR OF SPORAMIN LUC 2 Fvb3-1 - View
Fragaria x ananassa FAN21G0644 PTHR31717//PTHR31717:SF9 - FAMILY NOT NAMED // ACTIVATOR OF SPORAMIN LUC 2 Fvb3-2 + View
Fragaria vesca FvH4_3g15550 PTHR31717//PTHR31717:SF9 - FAMILY NOT NAMED // ACTIVATOR OF SPORAMIN LUC 2 Fvb3 + View
Gossypium hirsutum Gohir.D01G079800 PTHR31717//PTHR31717:SF9 - FAMILY NOT NAMED // ACTIVATOR OF SPORAMIN LUC 2 D01 - View
Gossypium hirsutum Gohir.A01G095600 PTHR31717//PTHR31717:SF9 - FAMILY NOT NAMED // ACTIVATOR OF SPORAMIN LUC 2 A01 - View
Glycine max Glyma.15G258200 PTHR31717//PTHR31717:SF9 - FAMILY NOT NAMED // ACTIVATOR OF SPORAMIN LUC 2 Gm15 - View
Glycine max Glyma.08G168900 PTHR31717//PTHR31717:SF9 - FAMILY NOT NAMED // ACTIVATOR OF SPORAMIN LUC 2 Gm08 + View
Gossypium raimondii Gorai.002G104600 Chr02 - View
Helianthus annuus HanXRQChr11g0335061 Probable activator of spomin::LUC2 HanXRQChr11 + View
Lupinus albus Lalb_Chr25g0284851 PTHR31717//PTHR31717:SF9 - FAMILY NOT NAMED // ACTIVATOR OF SPORAMIN LUC 2 Lalb_Chr25 + View
Lupinus albus Lalb_Chr03g0031751 PTHR31717//PTHR31717:SF9 - FAMILY NOT NAMED // ACTIVATOR OF SPORAMIN LUC 2 Lalb_Chr03 + View
Lotus japonicus Lj3g0007504 PTHR31717:SF9 - ACTIVATOR OF SPORAMIN LUC 2 chr3 - View
Lactuca sativa Lsat_1_v5_gn_7_111641 Lsat_1_v8_lg_7 + View
Malus domestica MD10G1203800 activator of spomin::LUC2 Chr10 - View
Malus domestica MD05G1222200 activator of spomin::LUC2 Chr05 - View
Manihot esculenta Manes.14G012100 Chromosome14 + View
Manihot esculenta Manes.06G173501 Chromosome06 - View
Medicago truncatula Medtr2g068730 CCT motif protein chr2 + View
Nicotiana tabacum Nitab4.5_0002321g0050 CCT domain Nitab4.5_0002321 + View
Olea europaea Oeu051670.1 chr21 + View
Petunia axillaris Peaxi162Scf00452g00622 activator of spomin::LUC2 Peaxi162Scf00452 + View
Prunus persica Prupe.4G138100 PTHR31717:SF9 - ACTIVATOR OF SPORAMIN LUC 2 Pp04 + View
Populus trichocarpa Potri.007G066800 PTHR31717//PTHR31717:SF9 - FAMILY NOT NAMED // ACTIVATOR OF SPORAMIN LUC 2 Chr07 - View
Populus trichocarpa Potri.005G097700 PTHR31717//PTHR31717:SF9 - FAMILY NOT NAMED // ACTIVATOR OF SPORAMIN LUC 2 Chr05 + View
Quercus lobata QL04p077060 4 - View
Rosa chinensis RcHm_v2.0_Chr5g0026181 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim06G0240000 chr06 - View
Striga asiatica SGA_v2.0_scaffold7G03595 scaffold7 - View
Striga asiatica SGA_v2.0_scaffold239G44049 scaffold239 + View
Salvia bowleyana SalBow8G4218 GWHASIU00000004 - View
Salix brachista Sabra07G0053400 GWHAAZH00000007 - View
Salix brachista Sabra05G0080000 GWHAAZH00000005 + View
Simmondsia chinensis Sc09g0007680 GWHAASQ00000009 + View
Sechium edule Sed0021707 LG05 - View
Sechium edule Sed0004309 LG04 - View
Sechium edule Sed0011603 LG01 - View
Solanum lycopersicum Solyc07g066510.4 Zinc finger protein CONSTANS-LIKE 3 (AHRD V3.3 *-* A0A1J3GS04_NOCCA) SL4.0ch07 - View
Schrenkiella parvula Sp3g11030 PTHR31717//PTHR31717:SF9 - FAMILY NOT NAMED // ACTIVATOR OF SPORAMIN LUC 2 ch3-1 + View
Solanum pennellii Sopen07g034670 Encodes a protein belonging to a class of CCT (CONSTANS, CONSTANS-like, TOC1) domain proteins. The protein contains a 43 amino acid-long sequence with high homology to the CCT domain but does not have any B-box or GATA-type zinc finger domains. Functions as a transcriptional activator and regulates the expression of at least a subset of sugar-inducible genes. | activator of spomin::LUC2 (ASML2) | CONTAINS InterPro DOMAIN/s: CCT domain | BEST Arabidopsis thaliana protein match is: CCT motif family protein Spenn-ch07 - View
Solanum tuberosum PGSC0003DMG400022124 Activator of sporamin LUC 2 ST4.03ch07 - View
Theobroma cacao Thecc.07G160100 Activator of spomin::LUC2 Chromosome_7 - View
Tarenaya hassleriana THA.LOC104822755 uncharacterized protein LOC104822755 isoform X1 NW_010966725.1 - View
Trifolium pratense TPR.G33849 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI39G0598 NC_052250.1 - View
Vaccinium macrocarpon vmacro11719 Similar to HD1: Zinc finger protein HD1 (Oryza sativa subsp. japonica OX%3D39947) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01020352001 chr19 - View