Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G2320 LG-4 - View
Acer truncatum Atru.chr2.2011 chr2 + View
Arabidopsis lyrata AL2G39030 scaffold_2 + View
Avicennia marina MSTRG.14972 ScioBoG_19538_HRSCAF_19626 - View
Avicennia marina MSTRG.14251 ScioBoG_18782_HRSCAF_18867 - View
Arabidopsis thaliana AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 (emb1473)%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%2C embryo development ending in seed dormancy%3B LOCATED IN: thylakoid%2C ribosome%2C chloroplast%2C chloroplast stroma%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L13%2C bacterial-type (InterPro:IPR005823)%2C Ribosomal protein L13 (InterPro:IPR005822)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT3G01790.2)%3B Has 8725 Blast hits to 8725 proteins in 2839 species: Archae - 248%3B Bacteria - 5258%3B Metazoa - 358%3B Fungi - 293%3B Plants - 251%3B Viruses - 0%3B Other Eukaryotes - 2317 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC08g47422 ChrC08 - View
Brassica carinata BcaC03g15828 ChrC03 + View
Brassica napus C02p35700 C02 + View
Brassica napus C06p52530 C06 + View
Brassica napus A07p43900 A07 + View
Brassica oleracea BolC6t40272H C6 + View
Brassica rapa BraA07t31897Z A07 + View
Beta vulgaris EL10Ac4g08382 K03504 - DNA polymerase delta subunit 3 (POLD3) Chr4_EL10_PGA_scaffold1 - View
Capsicum annuum CAN.G375.47 PGAv.1.6.scaffold375 - View
Cannabis sativa CANSAT56G0836 NC_044371.1 + View
Corylus avellana Haze_09242 Similar to RPL13: 50S ribosomal protein L13, chloroplastic (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc05_g10750 50S ribosomal protein L13, chloroplastic chr5 + View
Ceratophyllum demersum CDE10G1050 8 - View
Ceratophyllum demersum CDE10G1087 8 - View
Carpinus fangiana Cfa019511 Cfa08 - View
Cardamine hirsuta CARHR072150 50S ribosomal protein L13, putative Chr2 + View
Carya illinoinensis CiPaw.12G110400 PTHR11545//PTHR11545:SF7 - RIBOSOMAL PROTEIN L13 // 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC Chr12 - View
Citrullus lanatus ClCG11G017210 50S ribosomal protein L13, putative CG_Chr11 + View
Cucumis melo MELO3C025669.2 50S ribosomal protein L13, chloroplastic chr07 + View
Chenopodium quinoa AUR62019642 RPL13: 50S ribosomal protein L13, chloroplastic C_Quinoa_Scaffold_2127 - View
Chenopodium quinoa AUR62039587 RPL13: 50S ribosomal protein L13, chloroplastic C_Quinoa_Scaffold_3498 + View
Capsella rubella Carub.0002s2548 PTHR11545:SF7 - 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC scaffold_2 + View
Cucumis sativus L. CsaV3_4G032830 50S ribosomal protein L13 chr4 + View
Daucus carota DCAR_019610 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv13366 GWHABJS00000001 + View
Erythranthe guttata Migut.H02022 scaffold_8 - View
Eutrema salsugineum Thhalv10018425m.g K03504 - DNA polymerase delta subunit 3 (POLD3) scaffold_9 - View
Fragaria x ananassa FAN16G1979 PF00197//PF00572 - Trypsin and protease inhibitor (Kunitz_legume) // Ribosomal protein L13 (Ribosomal_L13) Fvb3-3 + View
Fragaria x ananassa FAN21G2329 PTHR11545//PTHR11545:SF7 - RIBOSOMAL PROTEIN L13 // 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC Fvb3-2 + View
Fragaria x ananassa FAN25G2808 K02871 - large subunit ribosomal protein L13 (RP-L13, MRPL13, rplM) Fvb3-1 - View
Fragaria x ananassa FAN11G3657 K02871 - large subunit ribosomal protein L13 (RP-L13, MRPL13, rplM) Fvb3-4 - View
Fragaria vesca FvH4_3g17780 PTHR11545:SF7 - 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC Fvb3 + View
Gossypium hirsutum Gohir.D13G155000 K02871 - large subunit ribosomal protein L13 (RP-L13, MRPL13, rplM) D13 - View
Gossypium hirsutum Gohir.D01G038800 K02871 - large subunit ribosomal protein L13 (RP-L13, MRPL13, rplM) D01 + View
Gossypium hirsutum Gohir.A01G048100 K02871 - large subunit ribosomal protein L13 (RP-L13, MRPL13, rplM) A01 + View
Gossypium hirsutum Gohir.D05G340400 K03504 - DNA polymerase delta subunit 3 (POLD3) D05 - View
Gossypium raimondii Gorai.013G175400 Chr13 - View
Gossypium raimondii Gorai.009G366800 Chr09 - View
Gossypium raimondii Gorai.002G048000 Chr02 + View
Helianthus annuus HanXRQChr13g0389701 Putative ribosomal protein L13; Ribosomal protein L13, conserved site; Ribosomal protein L13 domain HanXRQChr13 - View
Hydrangea macrophylla Hma1.2p1_0050F.1_g028830 Hma1.2p1_0050F.1 - View
Lupinus albus Lalb_Chr25g0285731 PTHR17598//PTHR17598:SF13 - FAMILY NOT NAMED // DNA POLYMERASE DELTA SUBUNIT 3 Lalb_Chr25 + View
Lotus japonicus Lj3g0015531 PTHR11545//PTHR11545:SF7 - RIBOSOMAL PROTEIN L13 // 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC chr3 - View
Lonicera japonica Lj8C147T4 GWHAAZE00000008 + View
Lonicera japonica Lj1A825T64 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_9_100460 PTHR11545:SF7 - 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC Lsat_1_v8_lg_9 - View
Lactuca sativa Lsat_1_v5_gn_7_102200 K03504 - DNA polymerase delta subunit 3 (POLD3) Lsat_1_v8_lg_7 + View
Magnolia biondii MBI06_g08527_MAGBIO AED:0.38 Chr06 - View
Manihot esculenta Manes.15G097600 Chromosome15 - View
Medicago truncatula Medtr8g054450 50S ribosomal protein L13 chr8 + View
Nelumbo nucifera Nn3g21096 chr3 - View
Olea europaea Oeu058458.1 chr21 - View
Olea europaea Oeu010028.4 chr6 - View
Petunia axillaris Peaxi162Scf00111g01331 50S ribosomal protein L13 Peaxi162Scf00111 + View
Punica granatum PGR083G1533 NC_045133.1 - View
Prunus persica Prupe.4G156900 PTHR11545:SF7 - 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC Pp04 + View
Papaver somniferum PSO170G5902 NC_039360.1 - View
Papaver somniferum PSO541G2585 NC_039363.1 + View
Populus trichocarpa Potri.001G384600 PTHR11545:SF7 - 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC Chr01 + View
Populus trichocarpa Potri.011G106100 K02871 - large subunit ribosomal protein L13 (RP-L13, MRPL13, rplM) Chr11 + View
Phaseolus vulgaris Phvul.011G168200 PTHR11545:SF7 - 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC Chr11 + View
Rosa chinensis RcHm_v2.0_Chr5g0029571 RcHm_v2.0_Chr5 + View
Striga asiatica SGA_v2.0_scaffold130G34270 scaffold130 + View
Salvia bowleyana SalBow7G3921 GWHASIU00000005 + View
Salix brachista Sabra16G0253200 GWHAAZH00000016 + View
Simmondsia chinensis Sc16g0007720 GWHAASQ00000016 - View
Simmondsia chinensis Sc03g0010610 GWHAASQ00000003 - View
Solanum lycopersicum Solyc07g062190.4 50S ribosomal protein L13 (AHRD V3.3 *** A0A1U8HCH6_CAPAN) SL4.0ch07 + View
Schrenkiella parvula Sp5g33720 PTHR11545//PTHR11545:SF7 - RIBOSOMAL PROTEIN L13 // 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC ch5-7 + View
Solanum pennellii Sopen07g030470 embryo defective 1473 (emb1473) | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation, embryo development ending in seed dormancy | LOCATED IN: thylakoid, ribosome, chloroplast, chloroplast stroma | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L13, bacterial-type , Ribosomal protein L13 | BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein Spenn-ch07 + View
Solanum tuberosum PGSC0003DMG400007062 50S ribosomal protein L13, chloroplastic ST4.03ch07 + View
Selenicereus undatus Hund10438 Scaffold_10417 + View
Trochodendron aralioides TAR626G0804 group3 - View
Trochodendron aralioides TAR627G0906 group6 - View
Theobroma cacao Thecc.07G130500 Ribosomal protein L13 family protein Chromosome_7 - View
Tarenaya hassleriana THA.LOC104813996 50S ribosomal protein L13%2C chloroplastic NW_010965373.1 + View
Tarenaya hassleriana THA.LOC104808089 uncharacterized protein LOC104808089 NW_010964598.1 + View
Tripterygium wilfordii TWI38G1964 NC_052252.1 + View
Vaccinium macrocarpon vmacro11955 Similar to Pold3: DNA polymerase delta subunit 3 (Mus musculus OX%3D10090) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1127G1496 CM024076.1 + View
Vitis vinifera GSVIVG01014101001 chr19 + View