Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G17100 LG-8 + View
Acer truncatum Atru.chr5.1932 chr5 - View
Actinidia chinensis Actinidia09500 Lachesis_group15 + View
Actinidia chinensis Actinidia37574 Lachesis_group13 - View
Actinidia chinensis Actinidia30100 Lachesis_group24 - View
Actinidia chinensis Actinidia23743 Lachesis_group9 + View
Arabidopsis lyrata AL3G47950 scaffold_3 - View
Avicennia marina MSTRG.17536 ScioBoG_19834_HRSCAF_19925 + View
Avicennia marina MSTRG.18372 ScioBoG_22153_HRSCAF_22259 + View
Avicennia marina MSTRG.21441 ScioBoG_26769_HRSCAF_26899 - View
Amaranthus hybridus Ah.08g214210 AmaHy_arrow1_Scaffold_8 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.688MDI K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) arahy.Tifrunner.gnm1.Arahy.12 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.RNZ1PG K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.198ABM K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) arahy.Tifrunner.gnm1.Arahy.02 + View
Arabidopsis thaliana AT2G20140 AAA-type ATPase family protein Encodes one of the two RPT2 (26S proteasome subunit RPT2) paralogs: RPT2a (At4g29040) and RPT2b (At2g20140). RPT2b can not complement the rpt2a mutant phenotype. rpt2a rpt2b double mutants are embryo lethal. AAA-type ATPase family protein%3B FUNCTIONS IN: hydrolase activity%2C nucleoside-triphosphatase activity%2C ATPase activity%2C nucleotide binding%2C ATP binding%3B INVOLVED IN: N-terminal protein myristoylation%3B LOCATED IN: proteasome complex%2C plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%2C ATPase%2C AAA-type%2C core (InterPro:IPR003959)%2C ATPase%2C AAA-type%2C conserved site (InterPro:IPR003960)%2C 26S proteasome subunit P45 (InterPro:IPR005937)%3B BEST Arabidopsis thaliana protein match is: regulatory particle AAA-ATPase 2A (TAIR:AT4G29040.1)%3B Has 31279 Blast hits to 28945 proteins in 3121 species: Archae - 1433%3B Bacteria - 10368%3B Metazoa - 4867%3B Fungi - 3760%3B Plants - 3280%3B Viruses - 37%3B Other Eukaryotes - 7534 (source: NCBI BLink). Chr2 + View
Beta vulgaris EL10Ac7g17816 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) Chr7_EL10_PGA_scaffold5 + View
Capsicum annuum CAN.G771.53 PGAv.1.6.scaffold771 + View
Cannabis sativa CANSAT01G0959 NC_044373.1 - View
Cicer arietinum L. Ca_08773_v3 Ca_LG3_v3 - View
Cicer arietinum L. Ca_09621_v3 Ca_LG4_v3 + View
Corylus avellana Haze_24756 Similar to RPT2A: 26S proteasome regulatory subunit 4 homolog A (Arabidopsis thaliana OX%3D3702) 8 + View
Coffea canephora Cc01_g17400 26S proteasome regulatory subunit 4 homolog A chr1 - View
Citrus clementina Ciclev10020143m.g scaffold_3 + View
Carpinus fangiana Cfa002524 Cfa01 + View
Cardamine hirsuta CARHR110650 26S protease regulatory subunit, putative Chr3 + View
Carya illinoinensis CiPaw.03G152800 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) Chr03 - View
Carya illinoinensis CiPaw.04G108100 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) Chr04 - View
Citrullus lanatus ClCG07G001630 26S protease regulatory subunit, putative CG_Chr07 - View
Cucumis melo MELO3C012807.2 26S protease regulatory subunit, putative chr04 + View
Carica papaya Cpa.g.sc8.197 supercontig_8 + View
Chenopodium quinoa AUR62008896 RPT2A: 26S proteasome regulatory subunit 4 homolog A C_Quinoa_Scaffold_1710 + View
Chenopodium quinoa AUR62031812 RPT2A: 26S proteasome regulatory subunit 4 homolog A C_Quinoa_Scaffold_1895 - View
Capsella rubella Carub.0003s3444 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) scaffold_3 + View
Cucumis sativus L. CsaV3_3G028620 26S proteasome regulatory subunit 4 homolog chr3 + View
Daucus carota DCAR_018545 hypothetical protein DCARv2_Chr5 - View
Daucus carota DCAR_000541 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_004703 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv19235 GWHABJS00000010 + View
Davidia involucrata Dinv43030 GWHABJS00000085 + View
Durio zibethinus Duzib133G0232 NW_019167938.1 - View
Durio zibethinus Duzib138G1446 NW_019167893.1 - View
Durio zibethinus Duzib211G0279 NW_019168049.1 - View
Erigeron canadensis ECA247G0226 Conyza_canadensis_scaffold:7 + View
Erigeron canadensis ECA248G1027 Conyza_canadensis_scaffold:9 + View
Eucalyptus grandis Eucgr.H00817 Chr08 + View
Erythranthe guttata Migut.D00506 scaffold_4 + View
Erythranthe guttata Migut.N02249 scaffold_14 + View
Eutrema salsugineum Thhalv10001985m.g K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) scaffold_12 + View
Fragaria x ananassa FAN27G3313 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) Fvb2-1 - View
Fragaria x ananassa FAN24G0177 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) Fvb2-2 - View
Fragaria x ananassa FAN15G1242 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) Fvb2-4 + View
Fragaria vesca FvH4_2g19750 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) Fvb2 + View
Gossypium hirsutum Gohir.A08G193300 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) A08 - View
Gossypium hirsutum Gohir.D08G211300 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) D08 - View
Gossypium hirsutum Gohir.A07G201800 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) A07 + View
Gossypium hirsutum Gohir.A07G154201 KOG0726 - 26S proteasome regulatory complex, ATPase RPT2 A07 - View
Gossypium hirsutum Gohir.D07G208100 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) D07 + View
Glycine max Glyma.03G170600 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) Gm03 - View
Glycine max Glyma.19G171700 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) Gm19 - View
Glycine max Glyma.10G043000 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) Gm10 - View
Glycine max Glyma.13G130400 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) Gm13 - View
Gossypium raimondii Gorai.001G234700 Chr01 + View
Gossypium raimondii Gorai.004G224000 Chr04 - View
Helianthus annuus HanXRQChr15g0468451 Probable regulatory particle AAA-ATPase 2A HanXRQChr15 + View
Helianthus annuus HanXRQChr01g0014771 Probable 26S protease regulatory subunit 4 homolog HanXRQChr01 + View
Lupinus albus Lalb_Chr21g0314241 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) Lalb_Chr21 - View
Lupinus albus Lalb_Chr20g0113331 3.4.25.1 - Proteasome endopeptidase complex / Proteasome Lalb_Chr20 + View
Lupinus albus Lalb_Chr25g0289641 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) Lalb_Chr25 + View
Lupinus albus Lalb_Chr02g0152951 3.4.25.1 - Proteasome endopeptidase complex / Proteasome Lalb_Chr02 - View
Lupinus albus Lalb_Chr06g0170941 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) Lalb_Chr06 - View
Lotus japonicus Lj1g0008600 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) chr1 + View
Lonicera japonica Lj1A81T58 GWHAAZE00000001 - View
Lonicera japonica Lj2C1136G3 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_9_11120 Lsat_1_v8_lg_9 - View
Lactuca sativa Lsat_1_v5_gn_5_179060 Lsat_1_v8_lg_5 + View
Malus domestica MD05G1182100 regulatory particle AAA-ATPase 2A Chr05 + View
Malus domestica MD10G1170400 regulatory particle AAA-ATPase 2A Chr10 + View
Manihot esculenta Manes.12G043700 Chromosome12 - View
Manihot esculenta Manes.13G043200 Chromosome13 - View
Medicago truncatula Medtr7g099640 regulatory particle triple-A ATPase chr7 - View
Medicago truncatula Medtr1g069105 regulatory particle triple-A ATPase chr1 + View
Nelumbo nucifera Nn3g19876 chr3 - View
Nelumbo nucifera Nn1g03101 chr1 - View
Nicotiana tabacum Nitab4.5_0000813g0060 ATPase, AAA-type, conserved site, P-loop containing nucleoside triphosphate hydrolase, ATPase, AAA-type, core Nitab4.5_0000813 - View
Nicotiana tabacum Nitab4.5_0002085g0160 ATPase, AAA-type, conserved site, P-loop containing nucleoside triphosphate hydrolase, AAA+ ATPase domain, 26S proteasome subunit P45, ATPase, AAA-type, core Nitab4.5_0002085 - View
Olea europaea Oeu015451.1 chr22 + View
Petunia axillaris Peaxi162Scf00052g01813 26S protease regulatory subunit 4 homolog Peaxi162Scf00052 - View
Punica granatum PGR083G0470 NC_045133.1 + View
Punica granatum PGR044G2074 NC_045134.1 - View
Prunus persica Prupe.8G208900 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) Pp08 + View
Populus trichocarpa Potri.002G252600 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) Chr02 + View
Phaseolus vulgaris Phvul.001G168800 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) Chr01 - View
Phaseolus vulgaris Phvul.007G156500 K03062 - 26S proteasome regulatory subunit T2 (PSMC1, RPT2) Chr07 - View
Quercus lobata QL09p044323 9 + View
Rosa chinensis RcHm_v2.0_Chr6g0285461 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim01G0258200 chr01 + View
Rhododendron simsii Rhsim13G0042200 chr13 - View
Striga asiatica SGA_v2.0_scaffold42G16153 scaffold42 - View
Striga asiatica SGA_v2.0_scaffold8G04665 scaffold8 - View
Salvia bowleyana SalBow4G3250 GWHASIU00000008 - View
Salvia bowleyana SalBow6G4408 GWHASIU00000002 - View
Salix brachista Sabra02G0191800 GWHAAZH00000002 + View
Simmondsia chinensis Sc17g0002490 GWHAASQ00000017 - View
Sechium edule Sed0003762 LG05 - View
Sechium edule Sed0001703 LG01 + View
Solanum lycopersicum Solyc06g083620.3 26S proteasome regulatory subunit (AHRD V3.3 *** A8IHB3_CHLRE) SL4.0ch06 - View
Solanum pennellii Sopen06g035010 26S proteasome AAA-ATPase subunit RPT2a (RPT2a) mRNA, | regulatory particle AAA-ATPase 2A (RPT2a) | FUNCTIONS IN: ATPase activity | INVOLVED IN: in 17 processes | LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, membrane | EXPRESSED IN: 29 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core , ATPase, AAA-type, core , ATPase, AAA-type, conserved site , 26S proteasome subunit P45 | BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400020086 26S proteasome subunit 4 ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG400015804 26S proteasome subunit 4 ST4.03ch09 - View
Trochodendron aralioides TAR633G2227 group2 - View
Trochodendron aralioides TAR362G0976 group17 + View
Trochodendron aralioides TAR365G0354 group16 + View
Theobroma cacao Thecc.01G232300 Regulatory particle AAA-ATPase 2A Chromosome_1 + View
Tarenaya hassleriana THA.LOC104804026 26S proteasome regulatory subunit 4 homolog A-like NW_010971389.1 + View
Tarenaya hassleriana THA.LOC104814549 26S proteasome regulatory subunit 4 homolog A NW_010965451.1 - View
Tarenaya hassleriana THA.LOC104820054 26S proteasome regulatory subunit 4 homolog A-like NW_010966177.1 + View
Tripterygium wilfordii TWI14G0386 NC_052249.1 - View
Tripterygium wilfordii TWI23G0069 NC_052239.1 - View
Tripterygium wilfordii TWI59G0148 NC_052248.1 - View
Vaccinium macrocarpon vmacro02734 Similar to TBP2: 26S proteasome regulatory subunit 4 homolog (Oryza sativa subsp. japonica OX%3D39947) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro14769 Similar to RPT2A: 26S proteasome regulatory subunit 4 homolog A (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G2228 CM024071.1 - View
Vigna mungo VMungo1383G0522 CM024070.1 - View
Vitis vinifera GSVIVG01028520001 chr7 - View