Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0039814 PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 [Vitis vinifera] Chr7 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia35183 Lachesis_group2 + View
Arabidopsis lyrata AL3G26770 scaffold_3 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.4JR4GS KOG1865 - Ubiquitin carboxyl-terminal hydrolase arahy.Tifrunner.gnm1.Arahy.07 - View
Arabidopsis thaliana AT3G14400 ubiquitin-specific protease 25 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 25 (UBP25)%3B FUNCTIONS IN: ubiquitin-specific protease activity%2C ubiquitin thiolesterase activity%3B INVOLVED IN: ubiquitin-dependent protein catabolic process%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2%2C conserved site (InterPro:IPR018200)%2C Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394)%3B BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 23 (TAIR:AT5G57990.1)%3B Has 8659 Blast hits to 7314 proteins in 254 species: Archae - 0%3B Bacteria - 9%3B Metazoa - 4447%3B Fungi - 1449%3B Plants - 1041%3B Viruses - 9%3B Other Eukaryotes - 1704 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC05g29086 ChrC05 + View
Brassica carinata BcaB06g25388 ChrB06 + View
Capsicum annuum CAN.G1003.14 PGAv.1.6.scaffold1003 + View
Citrus clementina Ciclev10019218m.g scaffold_3 - View
Carpinus fangiana Cfa019445 Cfa08 - View
Cardamine hirsuta CARHR089380 Ubiquitin carboxyl-terminal hydrolase Chr3 + View
Capsella rubella Carub.0003s1411 PF10163//PF13423 - Transcription factor e(y)2 (EnY2) // Ubiquitin carboxyl-terminal hydrolase (UCH_1) scaffold_3 - View
Cucumis sativus L. CsaV3_4G007730 Ubiquitin carboxyl-terminal hydrolase chr4 - View
Daucus carota DCAR_013802 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv21352 GWHABJS00000001 - View
Erigeron canadensis ECA236G0178 Conyza_canadensis_scaffold:3 - View
Erythranthe guttata Migut.M00664 scaffold_13 + View
Eutrema salsugineum Thhalv10020237m.g K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42) scaffold_13 + View
Fragaria x ananassa FAN11G0288 K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42) Fvb3-4 + View
Fragaria vesca FvH4_3g16490 K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42) Fvb3 - View
Lonicera japonica Lj1A807T27 GWHAAZE00000001 - View
Magnolia biondii MBI10_g30414_MAGBIO AED:0.14 Chr10 + View
Medicago truncatula Medtr2g070390 ubiquitin carboxyl-terminal hydrolase chr2 - View
Petunia axillaris Peaxi162Scf00111g00632 Ubiquitin carboxyl-terminal hydrolase 25 Peaxi162Scf00111 - View
Prunus persica Prupe.4G147900 K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42) Pp04 - View
Quercus lobata QL04p070131 4 - View
Quercus lobata QL04p071243 4 - View
Rosa chinensis RcHm_v2.0_Chr5g0027521 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim04G0032900 chr04 - View
Solanum lycopersicum Solyc07g056520.3 Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** S8CUE5_9LAMI) SL4.0ch07 - View
Solanum lycopersicum Solyc07g061780.4 Ubiquitin carboxyl-terminal hydrolase 19 (AHRD V3.3 *** A0A1U8EZE1_CAPAN) SL4.0ch07 + View
Schrenkiella parvula Sp3g12690 KOG1871//KOG1872//KOG1873 - Ubiquitin-specific protease // Ubiquitin-specific protease // Ubiquitin-specific protease ch3-1 - View
Solanum pennellii Sopen07g029880 Encodes a ubiquitin-specific protease. | ubiquitin-specific protease 25 (UBP25) | FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity | INVOLVED IN: ubiquitin-dependent protein catabolic process | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site , Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 | BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 23 Spenn-ch07 - View
Solanum tuberosum PGSC0003DMG400027635 Ubiquitin carboxyl-terminal hydrolase ST4.03ch07 - View
Theobroma cacao Thecc.07G145500 Ubiquitin-specific protease 15 Chromosome_7 - View
Vaccinium macrocarpon vmacro09446 Similar to UBP25: Ubiquitin carboxyl-terminal hydrolase 25 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro12009 Similar to UBP15: Ubiquitin carboxyl-terminal hydrolase 15 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01000696001 chr19 + View