Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0005955 PREDICTED: protein EARLY FLOWERING 4-like [Nelumbo nucifera] Chr4 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G6740 LG-5 - View
Aethionema arabicum Aa31LG5G19530 LG-5 - View
Acer truncatum Atru.chr12.30 chr12 + View
Acer truncatum Atru.chr3.4218 chr3 - View
Actinidia chinensis Actinidia13936 Lachesis_group21 + View
Arabidopsis lyrata AL4G24680 scaffold_4 + View
Arabidopsis lyrata AL4G37700 scaffold_4 - View
Avicennia marina MSTRG.8327 ScioBoG_102841_HRSCAF_103114 + View
Amaranthus hybridus Ah.16g103500 Protein EARLY FLOWERING 4 (Protein ARRHYTHMIC 44) AmaHy_arrow1_Scaffold_16 + View
Aquilegia oxysepala Aqoxy4G02561 CHR04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.BVS13F PTHR33469//PTHR33469:SF1 - FAMILY NOT NAMED // PROTEIN ELF4-LIKE 1 arahy.Tifrunner.gnm1.Arahy.17 - View
Arabidopsis thaliana AT2G29950 ELF4-like 1 ELF4-like 1 (ELF4-L1)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 (InterPro:IPR009741)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1313) (TAIR:AT2G40080.1)%3B Has 147 Blast hits to 146 proteins in 34 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 146%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT2G40080 EARLY FLOWERING-like protein (DUF1313) Encodes a novel nuclear 111 amino-acid phytochrome-regulated component of a negative feedback loop involving the circadian clock central oscillator components CCA1 and LHY. ELF4 is necessary for light-induced expression of both CCA1 and LHY%2C and conversely%2C CCA1 and LHY act negatively on light-induced ELF4 expression. ELF4 promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. It is involved in the phyB-mediated constant red light induced seedling de-etiolation process and may function to coregulate the expression of a subset of phyB-regulated genes. EARLY FLOWERING 4 (ELF4)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: in 7 processes%3B LOCATED IN: nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 (InterPro:IPR009741)%3B BEST Arabidopsis thaliana protein match is: ELF4-like 1 (TAIR:AT2G29950.1)%3B Has 150 Blast hits to 149 proteins in 35 species: Archae - 0%3B Bacteria - 3%3B Metazoa - 0%3B Fungi - 0%3B Plants - 146%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). Chr2 - View
Amborella trichopoda ATR0618G091 AmTr_v1.0_scaffold00029 - View
Brassica carinata BcaC01g05438 ChrC01 + View
Brassica carinata BcaB02g09055 ChrB02 + View
Brassica carinata BcaC02g07349 ChrC02 - View
Brassica napus A03p22520 A03 - View
Brassica napus C03p26670 C03 - View
Brassica napus C04p67760 C04 - View
Brassica napus A05p06390 A05 + View
Brassica napus A04p30100 A04 + View
Brassica oleracea BolC4t28279H C4 - View
Brassica oleracea BolC3t15052H C3 - View
Brassica rapa BraA03t11479Z A03 - View
Brassica rapa BraA04t18497Z A04 - View
Beta vulgaris EL10Ac2g04825 PTHR33469:SF5 - PROTEIN EARLY FLOWERING 4 Chr2_EL10_PGA_scaffold6 + View
Capsicum annuum CAN.G394.128 PGAv.1.6.scaffold394 + View
Cicer arietinum L. Ca_15124_v3 Ca_LG5_v3 + View
Coffea canephora Cc01_g14200 Putative Protein ELF4-LIKE 1 chr1 + View
Citrus clementina Ciclev10032998m.g scaffold_4 + View
Citrus clementina Ciclev10029554m.g scaffold_8 + View
Carpinus fangiana Cfa001321 Cfa01 - View
Cardamine hirsuta CARHR135020 ELF4 protein Chr4 - View
Cardamine hirsuta CARHR123190 ELF4-like 1 Chr4 + View
Carya illinoinensis CiPaw.13G077400 PTHR33469:SF1 - PROTEIN ELF4-LIKE 1 Chr13 - View
Carya illinoinensis CiPaw.01G298200 PTHR33469:SF5 - PROTEIN EARLY FLOWERING 4 Chr01 + View
Citrullus lanatus ClCG07G004150 Early flowering 4 CG_Chr07 + View
Corchorus olitorius COL.COLO4_25719 hypothetical protein AWUE01019121.1 + View
Chenopodium quinoa AUR62012246 ELF4: Protein EARLY FLOWERING 4 C_Quinoa_Scaffold_1995 + View
Chenopodium quinoa AUR62022877 Protein of unknown function C_Quinoa_Scaffold_3378 + View
Capsella rubella Carub.0004s2222 PTHR33469//PTHR33469:SF5 - FAMILY NOT NAMED // PROTEIN EARLY FLOWERING 4 scaffold_4 - View
Capsella rubella Carub.0004s1103 PTHR33469//PTHR33469:SF1 - FAMILY NOT NAMED // PROTEIN ELF4-LIKE 1 scaffold_4 + View
Cucumis sativus L. CsaV3_5G010120 protein EARLY FLOWERING 4-like chr5 + View
Daucus carota DCAR_028568 hypothetical protein DCARv2_Chr8 - View
Durio zibethinus Duzib150G0944 NW_019167882.1 + View
Durio zibethinus Duzib114G0089 NW_019167926.1 - View
Durio zibethinus Duzib128G1970 NW_019168481.1 - View
Erigeron canadensis ECA233G5144 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.J00211 Chr10 - View
Erythranthe guttata Migut.F01385 scaffold_6 + View
Eutrema salsugineum Thhalv10017822m.g PTHR33469:SF5 - PROTEIN EARLY FLOWERING 4 scaffold_10 - View
Eutrema salsugineum Thhalv10017683m.g PTHR33469:SF1 - PROTEIN ELF4-LIKE 1 scaffold_10 + View
Fragaria x ananassa FAN01G2007 PF07011 - Protein of unknown function (DUF1313) (DUF1313) Fvb7-4 - View
Fragaria x ananassa FAN10G2894 PTHR33469:SF5 - PROTEIN EARLY FLOWERING 4 Fvb7-1 + View
Fragaria x ananassa FAN03G1352 PF07011 - Protein of unknown function (DUF1313) (DUF1313) Fvb7-3 - View
Fragaria vesca FvH4_7g24450 PF07011 - Protein of unknown function (DUF1313) (DUF1313) Fvb7 + View
Gossypium hirsutum Gohir.D10G247950 PTHR33469//PTHR33469:SF5 - FAMILY NOT NAMED // PROTEIN EARLY FLOWERING 4 D10 + View
Gossypium hirsutum Gohir.D06G169600 PTHR33469//PTHR33469:SF5 - FAMILY NOT NAMED // PROTEIN EARLY FLOWERING 4 D06 + View
Gossypium hirsutum Gohir.A06G163700 PTHR33469//PTHR33469:SF5 - FAMILY NOT NAMED // PROTEIN EARLY FLOWERING 4 A06 - View
Gossypium hirsutum Gohir.A05G088700 PTHR33469//PTHR33469:SF1 - FAMILY NOT NAMED // PROTEIN ELF4-LIKE 1 A05 - View
Gossypium hirsutum Gohir.A10G236100 PTHR33469//PTHR33469:SF5 - FAMILY NOT NAMED // PROTEIN EARLY FLOWERING 4 A10 + View
Gossypium hirsutum Gohir.D05G089700 PTHR33469//PTHR33469:SF1 - FAMILY NOT NAMED // PROTEIN ELF4-LIKE 1 D05 - View
Glycine max Glyma.14G059501 PTHR33469//PTHR33469:SF5 - FAMILY NOT NAMED // PROTEIN EARLY FLOWERING 4 Gm14 - View
Glycine max Glyma.11G229700 PTHR33469//PTHR33469:SF5 - FAMILY NOT NAMED // PROTEIN EARLY FLOWERING 4 Gm11 + View
Glycine max Glyma.18G027500 PTHR33469//PTHR33469:SF5 - FAMILY NOT NAMED // PROTEIN EARLY FLOWERING 4 Gm18 - View
Gossypium raimondii Gorai.010G198100 Chr10 - View
Gossypium raimondii Gorai.009G092100 Chr09 - View
Gossypium raimondii Gorai.011G287700 Chr11 + View
Hydrangea macrophylla Hma1.2p1_0281F.1_g113040 Hma1.2p1_0281F.1 + View
Lupinus albus Lalb_Chr11g0074961 PTHR33469:SF5 - PROTEIN EARLY FLOWERING 4 Lalb_Chr11 + View
Lupinus albus Lalb_Chr17g0346761 PTHR33469//PTHR33469:SF5 - FAMILY NOT NAMED // PROTEIN EARLY FLOWERING 4 Lalb_Chr17 + View
Lotus japonicus Lj6g0015093 PTHR33469:SF5 - PROTEIN EARLY FLOWERING 4 chr6 - View
Lactuca sativa Lsat_1_v5_gn_8_12161 PTHR33469:SF5 - PROTEIN EARLY FLOWERING 4 Lsat_1_v8_lg_8 - View
Magnolia biondii MBI05_g05305_MAGBIO AED:0.14 Chr05 + View
Malus domestica MD01G1152700 Protein of unknown function (DUF1313) Chr01 + View
Malus domestica MD11G1074300 Protein of unknown function (DUF1313) Chr11 - View
Manihot esculenta Manes.10G013000 Chromosome10 - View
Manihot esculenta Manes.01G161400 Chromosome01 - View
Manihot esculenta Manes.07G129600 Chromosome07 + View
Medicago truncatula Medtr3g070490 early flowering protein chr3 + View
Nelumbo nucifera Nn2g11503 chr2 + View
Petunia axillaris Peaxi162Scf00825g00022 Protein EARLY FLOWERING 4 Peaxi162Scf00825 + View
Punica granatum PGR044G1990 NC_045134.1 + View
Prunus persica Prupe.2G249800 PTHR33469:SF5 - PROTEIN EARLY FLOWERING 4 Pp02 + View
Pisum sativum Psat5g128480 Protein of unknown function (DUF1313) chr5LG3 - View
Papaver somniferum PSO339G0635 NC_039366.1 - View
Populus trichocarpa Potri.001G251600 PTHR33469//PTHR33469:SF1 - FAMILY NOT NAMED // PROTEIN ELF4-LIKE 1 Chr01 + View
Populus trichocarpa Potri.009G046400 PTHR33469//PTHR33469:SF1 - FAMILY NOT NAMED // PROTEIN ELF4-LIKE 1 Chr09 + View
Populus trichocarpa Potri.008G068200 PTHR33469//PTHR33469:SF5 - FAMILY NOT NAMED // PROTEIN EARLY FLOWERING 4 Chr08 + View
Phaseolus vulgaris Phvul.008G224300 PTHR33469:SF5 - PROTEIN EARLY FLOWERING 4 Chr08 - View
Phaseolus vulgaris Phvul.001G242900 PTHR33469:SF5 - PROTEIN EARLY FLOWERING 4 Chr01 + View
Quercus lobata QL01p038295 1 + View
Quercus lobata QL08p063151 8 + View
Rosa chinensis RcHm_v2.0_Chr1g0370131 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim03G0143500 chr03 + View
Salvia bowleyana SalBow6G5153 GWHASIU00000002 + View
Salix brachista Sabra08G0050100 GWHAAZH00000008 + View
Salix brachista Sabra16G0153000 GWHAAZH00000016 + View
Salix brachista Sabra09G0033600 GWHAAZH00000009 + View
Simmondsia chinensis Sc11g0005070 GWHAASQ00000011 + View
Sechium edule Sed0027235 LG07 + View
Sechium edule Sed0019507 LG04 + View
Solanum lycopersicum Solyc06g051660.1 Protein EARLY FLOWERING 4 (AHRD V3.3 *** A0A2G2WA22_CAPBA) SL4.0ch06 - View
Solanum lycopersicum Solyc06g076960.2 Protein EARLY FLOWERING 4 (AHRD V3.3 *** A0A2G3CBN6_CAPCH) SL4.0ch06 + View
Schrenkiella parvula Sp4g12510 PTHR33469//PTHR33469:SF1 - FAMILY NOT NAMED // PROTEIN ELF4-LIKE 1 ch4-6 + View
Schrenkiella parvula Sp4g22370 PTHR33469//PTHR33469:SF5 - FAMILY NOT NAMED // PROTEIN EARLY FLOWERING 4 ch4-6 - View
Solanum pennellii Sopen06g033360 hypothetical protein Spenn-ch06 + View
Solanum pennellii Sopen06g017630 Protein of unknown function DUF1313, Encodes a novel nuclear 111 amino-acid phytochrome-regulated component of a negative feedback loop involving the circadian clock central oscillator components CCA1 and LHY. ELF4 is necessary for light-induced expression of both CCA1 and LHY, and conversely, CCA1 and LHY act negatively on light-induced ELF4 expression. ELF4 promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. It is involved in the phyB-mediated constant red light induced seedling de-etiolation process and may function to coregulate the expression of a subset of phyB-regulated genes. | EARLY FLOWERING 4 (ELF4) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: in 7 processes | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 | BEST Arabidopsis thaliana protein match is: ELF4-like 1 Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400030357 ELF4 ST4.03ch06 + View
Solanum tuberosum PGSC0003DMG400001221 EARLY flowering 4 protein ST4.03ch06 + View
Selenicereus undatus Hund18847 Scaffold_33675 - View
Trochodendron aralioides TAR623G0816 group7 + View
Trochodendron aralioides TAR369G0688 group18 - View
Theobroma cacao Thecc.10G016800 Uncharacterized protein Chromosome_10 - View
Theobroma cacao Thecc.09G301600 Uncharacterized protein Chromosome_9 - View
Tarenaya hassleriana THA.LOC104824312 protein EARLY FLOWERING 4 NW_010966881.1 - View
Tripterygium wilfordii TWI31G0643 NC_052233.1 - View
Vigna mungo VMungo0647G0082 CM024073.1 + View
Vigna mungo VMungo1383G2559 CM024070.1 + View
Vigna mungo VMungo0647G2438 CM024073.1 + View
Vitis vinifera GSVIVG01032821001 chr13 + View