Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0047468 Pectin lyase-like superfamily protein, putative [Theobroma cacao] Chr5 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G18400 LG-5 + View
Actinidia chinensis Actinidia07890 Lachesis_group19 + View
Actinidia chinensis Actinidia09771 Lachesis_group5 - View
Arabidopsis lyrata AL8G20800 scaffold_8 - View
Arabidopsis lyrata AL3G19190 scaffold_3 - View
Avicennia marina MSTRG.6652 ScioBoG_102840_HRSCAF_103099 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FH67MT PTHR31375:SF37 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XI6GI4 PTHR31375:SF37 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.17 - View
Arabidopsis thaliana AT5G48140 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectin lyase fold (InterPro:IPR012334)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G07820.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT3G07820 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 11 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectin lyase fold (InterPro:IPR012334)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G07830.1)%3B Has 3636 Blast hits to 3621 proteins in 442 species: Archae - 6%3B Bacteria - 812%3B Metazoa - 14%3B Fungi - 1257%3B Plants - 1440%3B Viruses - 0%3B Other Eukaryotes - 107 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC09g47950 ChrC09 - View
Brassica carinata BcaC05g29574 ChrC05 - View
Brassica napus C02p56260 C02 - View
Brassica napus A05p40300 A05 - View
Brassica napus C03p43080 C03 - View
Brassica napus A03p35450 A03 - View
Brassica napus C05p59380 C05 - View
Brassica oleracea BolC5t34593H C5 - View
Brassica oleracea BolC2t11684H C2 - View
Brassica oleracea BolC3t16576H C3 - View
Brassica rapa BraA03t12722Z A03 - View
Beta vulgaris EL10Ac9g22751 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Chr9_EL10_PGA_scaffold8 + View
Cicer arietinum L. Ca_06469_v3 Ca_LG2_v3 + View
Corylus avellana Haze_12707 Similar to plaa2: Exopolygalacturonase (Fragment) (Platanus acerifolia OX%3D140101) 5 + View
Citrus clementina Ciclev10015423m.g scaffold_2 + View
Carpinus fangiana Cfa014260 Cfa06 + View
Cardamine hirsuta CARHR184200 Polygalacturonase 3 Chr6 + View
Cardamine hirsuta CARHR082530 Polygalacturonase 3 Chr3 - View
Carya illinoinensis CiPaw.03G276800 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Chr03 - View
Carya illinoinensis CiPaw.04G194500 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) Chr04 - View
Carya illinoinensis CiPaw.11G199200 PTHR31375//PTHR31375:SF10 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED Chr11 + View
Cucumis melo MELO3C014147.2 exopolygalacturonase-like chr06 - View
Carica papaya Cpa.g.sc136.8 supercontig_136 - View
Capsella rubella Carub.0003s0740 PTHR31375:SF37 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED scaffold_3 - View
Capsella rubella Carub.0008s0772 PTHR31375:SF37 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED scaffold_8 - View
Cucumis sativus L. CsaV3_7G002760 Polygalacturonase chr7 + View
Daucus carota DCAR_021113 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv07846 GWHABJS00000013 + View
Durio zibethinus Duzib133G1364 NW_019167938.1 + View
Durio zibethinus Duzib138G0650 NW_019167893.1 + View
Durio zibethinus Duzib211G0030 NW_019168049.1 + View
Erigeron canadensis ECA236G2107 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA240G2434 Conyza_canadensis_scaffold:5 + View
Eucalyptus grandis Eucgr.K00661 Chr11 + View
Eucalyptus grandis Eucgr.A01063 Chr01 + View
Erythranthe guttata Migut.M00012 scaffold_13 + View
Eutrema salsugineum Thhalv10004361m.g PTHR31375:SF37 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED scaffold_6 + View
Fragaria x ananassa FAN09G4356 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) Fvb6-2 - View
Fragaria x ananassa FAN02G0363 PTHR31375//PTHR31375:SF37 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED Fvb6-4 + View
Fragaria x ananassa FAN09G2158 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) Fvb6-2 - View
Fragaria vesca FvH4_6g41360 PTHR31375:SF23 - EXOPOLYGALACTURONASE / GALACTURAN 1,4-ALPHA-GALACTURONIDASE / PECTINASE-RELATED Fvb6 + View
Gossypium hirsutum Gohir.A11G150600 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) A11 + View
Gossypium hirsutum Gohir.D07G173500 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) D07 + View
Gossypium hirsutum Gohir.A07G167900 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A07 - View
Gossypium hirsutum Gohir.D11G157100 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) D11 + View
Glycine max Glyma.02G307000 PTHR31375:SF37 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED Gm02 - View
Glycine max Glyma.14G006100 PTHR31375:SF37 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED Gm14 + View
Gossypium raimondii Gorai.001G098100 Chr01 + View
Gossypium raimondii Gorai.001G193800 Chr01 + View
Gossypium raimondii Gorai.007G167600 Chr07 + View
Helianthus annuus HanXRQChr04g0126741 Probable exopolygalacturonase HanXRQChr04 + View
Hydrangea macrophylla Hma1.2p1_0133F.1_g061190 Hma1.2p1_0133F.1 - View
Lupinus albus Lalb_Chr17g0349161 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) Lalb_Chr17 + View
Lotus japonicus LjContig00081g0014112 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) Contig00081 + View
Lonicera japonica Lj8A133T56 GWHAAZE00000008 + View
Lactuca sativa Lsat_1_v5_gn_7_95661 3.2.1.67 - Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Lsat_1_v8_lg_7 - View
Lactuca sativa Lsat_1_v5_gn_5_123220 PTHR31375:SF37 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED Lsat_1_v8_lg_5 + View
Lactuca sativa Lsat_1_v5_gn_9_105680 PTHR31375:SF37 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED Lsat_1_v8_lg_9 - View
Magnolia biondii MBI19_g06157_MAGBIO AED:0.04 Chr19 - View
Magnolia biondii MBI16_g31700_MAGBIO AED:0.06 Chr16 - View
Malus domestica MD09G1120000 Pectin lyase-like superfamily protein Chr09 - View
Malus domestica MD17G1110800 Pectin lyase-like superfamily protein Chr17 - View
Medicago truncatula Medtr5g097860 polygalacturonase chr5 + View
Petunia axillaris Peaxi162Scf00047g02238 Pectin lyase-like superfamily protein Peaxi162Scf00047 - View
Punica granatum PGR142G0505 NC_045128.1 - View
Punica granatum PGR042G2412 NC_045130.1 - View
Prunus persica Prupe.3G203200 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Pp03 + View
Papaver somniferum PSO541G2255 NC_039363.1 - View
Populus trichocarpa Potri.014G162300 PTHR31375//PTHR31375:SF23 - FAMILY NOT NAMED // EXOPOLYGALACTURONASE / GALACTURAN 1,4-ALPHA-GALACTURONIDASE / PECTINASE-RELATED Chr14 + View
Phaseolus vulgaris Phvul.008G286900 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) Chr08 + View
Quercus lobata QL08p028988 8 + View
Rosa chinensis RcHm_v2.0_Chr2g0156901 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim06G0172400 chr06 - View
Salvia bowleyana SalBow7G0667 GWHASIU00000005 - View
Sechium edule Sed0012261 LG04 - View
Sechium edule Sed0024327 LG05 - View
Schrenkiella parvula Sp3g06750 PTHR31375:SF37 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED ch3-1 - View
Schrenkiella parvula Sp2g18540 PTHR31375//PTHR31375:SF37 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED ch2-4 - View
Trochodendron aralioides TAR626G1693 group3 + View
Tarenaya hassleriana THA.LOC104820122 polygalacturonase-like NW_010966177.1 - View
Tripterygium wilfordii TWI36G1774 NC_052237.1 + View
Tripterygium wilfordii TWI75G0830 NC_052253.1 + View
Tripterygium wilfordii TWI18G0669 NC_052241.1 - View
Vaccinium macrocarpon vmacro12125 Similar to Exopolygalacturonase (Fragment) (Oenothera organensis OX%3D3945) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01030017001 chr12 - View