Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG8G9700 | LG-8 | + | View | |
Acer truncatum | Atru.chr4.2095 | chr4 | - | View | |
Arabidopsis lyrata | AL3G37830 | scaffold_3 | + | View | |
Aquilegia oxysepala | Aqoxy5G00257 | CHR05 | - | View | |
Arabidopsis thaliana | AT3G23200 | Uncharacterized protein family (UPF0497) Uncharacterised protein family (UPF0497)%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497%2C trans-membrane plant (InterPro:IPR006702)%3B BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G53850.1)%3B Has 208 Blast hits to 208 proteins in 15 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 208%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). | Chr3 | + | View |
Brassica carinata | BcaC09g49261 | ChrC09 | + | View | |
Brassica carinata | BcaB06g26455 | ChrB06 | + | View | |
Brassica carinata | BcaB04g20465 | ChrB04 | - | View | |
Brassica napus | C07p14340 | C07 | - | View | |
Brassica oleracea | BolC7t41930H | C7 | - | View | |
Beta vulgaris | EL10Ac3g05032 | PF04535 - Domain of unknown function (DUF588) (DUF588) | Chr3_EL10_PGA_scaffold7 | - | View |
Cannabis sativa | CANSAT78G0620 | NC_044376.1 | - | View | |
Cicer arietinum L. | Ca_09819_v3 | Ca_LG4_v3 | + | View | |
Coffea canephora | Cc03_g05350 | CASP-like protein At3g23200 | chr3 | + | View |
Citrus clementina | Ciclev10006143m.g | scaffold_9 | + | View | |
Carpinus fangiana | Cfa008329 | Cfa03 | - | View | |
Cardamine hirsuta | CARHR099150 | Uncharacterised protein family (UPF0497) | Chr3 | + | View |
Carya illinoinensis | CiPaw.01G187000 | PF04535 - Domain of unknown function (DUF588) (DUF588) | Chr01 | - | View |
Citrullus lanatus | ClCG05G004390 | CASP-like protein | CG_Chr05 | - | View |
Citrullus lanatus | ClCG06G006890 | CASP-like protein | CG_Chr06 | + | View |
Cucumis melo | MELO3C022979.2 | CASP-like protein | chr05 | + | View |
Cucumis melo | MELO3C006436.2 | CASP-like protein | chr06 | - | View |
Chenopodium quinoa | AUR62028225 | At3g23200: CASP-like protein 5B3 | C_Quinoa_Scaffold_2933 | + | View |
Chenopodium quinoa | AUR62002108 | At3g23200: CASP-like protein 5B3 | C_Quinoa_Scaffold_4480 | + | View |
Capsella rubella | Carub.0003s2343 | PF04535 - Domain of unknown function (DUF588) (DUF588) | scaffold_3 | + | View |
Cucumis sativus L. | CsaV3_2G012910 | CASP-like protein | chr2 | - | View |
Cucumis sativus L. | CsaV3_3G012220 | CASP-like protein | chr3 | - | View |
Daucus carota | DCAR_024242 | hypothetical protein | DCARv2_Chr7 | + | View |
Davidia involucrata | Dinv27035 | GWHABJS00000014 | - | View | |
Durio zibethinus | Duzib151G0229 | NW_019167904.1 | + | View | |
Durio zibethinus | Duzib052G0162 | NW_019167849.1 | + | View | |
Eucalyptus grandis | Eucgr.H03094 | Chr08 | - | View | |
Erythranthe guttata | Migut.G00472 | scaffold_7 | + | View | |
Eutrema salsugineum | Thhalv10021696m.g | PF04535 - Domain of unknown function (DUF588) (DUF588) | scaffold_13 | - | View |
Fragaria x ananassa | FAN22G0930 | PF04535 - Domain of unknown function (DUF588) (DUF588) | Fvb4-1 | + | View |
Fragaria x ananassa | FAN12G3756 | PF04535 - Domain of unknown function (DUF588) (DUF588) | Fvb4-3 | - | View |
Fragaria vesca | FvH4_4g03370 | PF04535 - Domain of unknown function (DUF588) (DUF588) | Fvb4 | + | View |
Gossypium hirsutum | Gohir.A02G038100 | PF04535 - Domain of unknown function (DUF588) (DUF588) | A02 | + | View |
Gossypium hirsutum | Gohir.D02G044200 | PF04535 - Domain of unknown function (DUF588) (DUF588) | D02 | + | View |
Glycine max | Glyma.20G088500 | PF04535 - Domain of unknown function (DUF588) (DUF588) | Gm20 | + | View |
Glycine max | Glyma.10G187800 | PF04535 - Domain of unknown function (DUF588) (DUF588) | Gm10 | - | View |
Glycine max | Glyma.10G007400 | PF04535 - Domain of unknown function (DUF588) (DUF588) | Gm10 | - | View |
Glycine max | Glyma.20G203000 | PF04535 - Domain of unknown function (DUF588) (DUF588) | Gm20 | + | View |
Gossypium raimondii | Gorai.005G048900 | Chr05 | + | View | |
Hydrangea macrophylla | Hma1.2p1_0267F.1_g107470 | Hma1.2p1_0267F.1 | - | View | |
Lotus japonicus | Lj5g0007001 | PF04535 - Domain of unknown function (DUF588) (DUF588) | chr5 | - | View |
Lotus japonicus | Lj6g0023953 | PF04535 - Domain of unknown function (DUF588) (DUF588) | chr6 | - | View |
Lonicera japonica | Lj6A662T56 | GWHAAZE00000006 | + | View | |
Lonicera japonica | Lj3A802T47 | GWHAAZE00000003 | + | View | |
Malus domestica | MD16G1215800 | Uncharacterised protein family (UPF0497) | Chr16 | + | View |
Malus domestica | MD13G1212200 | Uncharacterised protein family (UPF0497) | Chr13 | + | View |
Manihot esculenta | Manes.15G039100 | Chromosome15 | + | View | |
Manihot esculenta | Manes.03G165800 | Chromosome03 | - | View | |
Medicago truncatula | Medtr1g043450 | CASP-like protein | chr1 | - | View |
Nelumbo nucifera | Nn1g02718 | chr1 | + | View | |
Nicotiana tabacum | Nitab4.5_0000342g0040 | Uncharacterised protein family UPF0497, trans-membrane plant | Nitab4.5_0000342 | - | View |
Olea europaea | Oeu011994.1 | scaffold1465 | - | View | |
Petunia axillaris | Peaxi162Scf00024g02318 | CASP-like protein | Peaxi162Scf00024 | + | View |
Punica granatum | PGR004G0556 | NC_045131.1 | + | View | |
Prunus persica | Prupe.1G037100 | Pp01 | + | View | |
Pisum sativum | Psat6g133160 | Domain of unknown function (DUF588) | chr6LG2 | + | View |
Pisum sativum | Psat6g137560 | Domain of unknown function (DUF588) | chr6LG2 | - | View |
Papaver somniferum | PSO210G7103 | NC_039359.1 | - | View | |
Papaver somniferum | PSO832G3583 | NC_039367.1 | - | View | |
Populus trichocarpa | Potri.010G073000 | PF04535 - Domain of unknown function (DUF588) (DUF588) | Chr10 | - | View |
Populus trichocarpa | Potri.008G165500 | PF04535 - Domain of unknown function (DUF588) (DUF588) | Chr08 | + | View |
Phaseolus vulgaris | Phvul.007G272500 | PF04535 - Domain of unknown function (DUF588) (DUF588) | Chr07 | + | View |
Rosa chinensis | RcHm_v2.0_Chr4g0392361 | RcHm_v2.0_Chr4 | + | View | |
Rhododendron simsii | Rhsim02G0035900 | chr02 | + | View | |
Salix brachista | Sabra08G0126000 | GWHAAZH00000008 | + | View | |
Salix brachista | Sabra10G0035300 | GWHAAZH00000010 | + | View | |
Simmondsia chinensis | Sc13g0005220 | GWHAASQ00000013 | + | View | |
Sechium edule | Sed0008763 | LG04 | + | View | |
Sechium edule | Sed0004271 | LG12 | + | View | |
Solanum lycopersicum | Solyc09g089850.3 | CASP-like protein (AHRD V3.3 *** A0A2I4GE76_9ROSI) | SL4.0ch09 | + | View |
Schrenkiella parvula | Sp3g20850 | PF04535 - Domain of unknown function (DUF588) (DUF588) | ch3-1 | + | View |
Solanum pennellii | Sopen09g032790 | Uncharacterised protein family (UPF0497) | CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant | BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) | Spenn-ch09 | + | View |
Solanum tuberosum | PGSC0003DMG400017235 | UPF0497 membrane protein | ST4.03ch09 | + | View |
Selenicereus undatus | Hund03032 | Scaffold_19641 | + | View | |
Trochodendron aralioides | TAR365G0082 | group16 | - | View | |
Theobroma cacao | Thecc.04G252900 | CASP-like protein | Chromosome_4 | + | View |
Tarenaya hassleriana | THA.LOC104808616 | CASP-like protein 5B3 | NW_010964923.1 | + | View |
Trifolium pratense | TPR.G15857 | Tp57577_TGAC_v2_scaf_249 | + | View | |
Vaccinium macrocarpon | vmacro15428 | Similar to At3g23200: CASP-like protein 5B3 (Arabidopsis thaliana OX%3D3702) | chr4_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vigna mungo | VMungo0720G3079 | CM024071.1 | - | View | |
Vitis vinifera | GSVIVG01027763001 | chr5 | + | View |