Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0017437 PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 isoform X1 [Glycine max] Contig1052 + View
CSS0044730 PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 isoform X1 [Glycine max] Chr13 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G14140 LG-4 - View
Acer truncatum Atru.chr3.3534 chr3 + View
Acer truncatum Atru.chr12.859 chr12 - View
Actinidia chinensis Actinidia24139 Lachesis_group24 - View
Actinidia chinensis Actinidia07179 Lachesis_group13 - View
Arabidopsis lyrata AL6G34090 scaffold_6 + View
Arabidopsis lyrata AL5G23460 scaffold_5 + View
Avicennia marina MSTRG.18696 ScioBoG_22153_HRSCAF_22259 - View
Aquilegia oxysepala Aqoxy2G01722 CHR02 + View
Aquilegia oxysepala Aqoxy1G01133 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A7H879 K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.RYV3A9 K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) arahy.Tifrunner.gnm1.Arahy.13 + View
Arabidopsis thaliana AT3G45000 SNF7 family protein VPS24.2%3B CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024)%3B BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G22950.1)%3B Has 1075 Blast hits to 1075 proteins in 225 species: Archae - 8%3B Bacteria - 4%3B Metazoa - 406%3B Fungi - 234%3B Plants - 299%3B Viruses - 0%3B Other Eukaryotes - 124 (source: NCBI BLink). VPS24.2%3B CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024)%3B BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G22950.1)%3B Has 820 Blast hits to 820 proteins in 190 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 324%3B Fungi - 161%3B Plants - 253%3B Viruses - 0%3B Other Eukaryotes - 82 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaB08g36387 ChrB08 - View
Brassica carinata BcaC03g13933 ChrC03 + View
Brassica carinata BcaB05g22673 ChrB05 - View
Brassica carinata BcaC04g19614 ChrC04 + View
Brassica napus C09p53640 C09 - View
Brassica napus BNapus_Darmor_BZH_scaffold_38p00230 BNapus_Darmor_BZH_scaffold_38 - View
Brassica napus A10p18050 A10 - View
Brassica oleracea BolC9t58239H C9 - View
Brassica rapa BraA10t43879Z A10 - View
Capsicum annuum CAN.G546.24 PGAv.1.6.scaffold546 - View
Cicer arietinum L. Ca_19311_v3 Ca_LG6_v3 - View
Corylus avellana Haze_16745 Similar to VPS24-1: Vacuolar protein sorting-associated protein 24 homolog 1 (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc01_g10420 Vacuolar protein sorting-associated protein 24 homolog 1 chr1 + View
Citrus clementina Ciclev10029212m.g scaffold_8 + View
Citrus clementina Ciclev10032656m.g scaffold_4 - View
Ceratophyllum demersum CDE06G0550 4 + View
Carya illinoinensis CiPaw.02G171700 K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) Chr02 + View
Cucumis melo MELO3C004945.2 vacuolar protein sorting-associated protein 24 homolog 1 chr12 - View
Carica papaya Cpa.g.sc1.15 supercontig_1 + View
Capsella rubella Carub.0005s1078 K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) scaffold_5 + View
Cucumis sativus L. CsaV3_1G013580 vacuolar protein sorting-associated protein 24 homolog 1 chr1 - View
Daucus carota DCAR_015514 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_018775 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv29366 GWHABJS00000007 + View
Davidia involucrata Dinv34732 GWHABJS00000010 + View
Durio zibethinus Duzib150G1519 NW_019167882.1 + View
Durio zibethinus Duzib170G0235 NW_019167871.1 - View
Erigeron canadensis ECA233G5403 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.B03938 Chr02 + View
Erythranthe guttata Migut.N02565 scaffold_14 + View
Erythranthe guttata Migut.D02268 scaffold_4 - View
Eutrema salsugineum Thhalv10014580m.g K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) scaffold_2 + View
Fragaria x ananassa FAN03G0690 PTHR10476:SF10 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 24 HOMOLOG 2-RELATED Fvb7-3 - View
Fragaria x ananassa FAN06G2043 PTHR10476:SF10 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 24 HOMOLOG 2-RELATED Fvb7-2 + View
Fragaria x ananassa FAN16G0507 PTHR10476:SF10 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 24 HOMOLOG 2-RELATED Fvb3-3 + View
Fragaria x ananassa FAN21G3294 K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) Fvb3-2 - View
Fragaria x ananassa FAN25G1779 K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) Fvb3-1 - View
Fragaria x ananassa FAN10G0869 K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) Fvb7-1 + View
Fragaria vesca FvH4_7g18680 K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) Fvb7 + View
Fragaria vesca FvH4_3g30890 K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) Fvb3 + View
Gossypium hirsutum Gohir.D03G138700 K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) D03 - View
Gossypium hirsutum Gohir.A03G029800 K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) A03 + View
Glycine max Glyma.12G080000 K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) Gm12 - View
Glycine max Glyma.11G193700 PTHR10476//PTHR10476:SF10 - CHARGED MULTIVESICULAR BODY PROTEIN // VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 24 HOMOLOG 2-RELATED Gm11 + View
Gossypium raimondii Gorai.003G145500 Chr03 - View
Helianthus annuus HanXRQChr01g0019541 Putative snf7 family HanXRQChr01 - View
Lupinus albus Lalb_Chr01g0004551 K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) Lalb_Chr01 - View
Lupinus albus Lalb_Chr03g0027661 K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) Lalb_Chr03 - View
Lotus japonicus Lj3g0011566 K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) chr3 - View
Lonicera japonica Lj1A208T39 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_6_44161 Lsat_1_v8_lg_6 + View
Lactuca sativa Lsat_1_v5_gn_1_62640 Lsat_1_v8_lg_1 + View
Malus domestica MD11G1146600 SNF7 family protein Chr11 - View
Manihot esculenta Manes.04G014101 Chromosome04 + View
Manihot esculenta Manes.11G151400 Chromosome11 - View
Medicago truncatula Medtr4g057565 vacuolar sorting-associated-like protein chr4 + View
Nelumbo nucifera Nn6g35260 chr6 + View
Nicotiana tabacum Nitab4.5_0000329g0200 Snf7 Nitab4.5_0000329 + View
Petunia axillaris Peaxi162Scf00892g00008 Charged multivesicular body protein 3 Peaxi162Scf00892 + View
Punica granatum PGR102G1455 NC_045129.1 - View
Prunus persica Prupe.6G109700 K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) Pp06 - View
Papaver somniferum PSO063G0736 NC_039364.1 - View
Papaver somniferum PSO339G3703 NC_039366.1 - View
Populus trichocarpa Potri.004G215500 K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) Chr04 - View
Phaseolus vulgaris Phvul.011G085100 K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) Chr11 - View
Quercus lobata QL01p015396 1 + View
Quercus lobata QL08p054176 8 + View
Rosa chinensis RcHm_v2.0_Chr1g0362411 RcHm_v2.0_Chr1 + View
Rosa chinensis RcHm_v2.0_Chr5g0057111 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim13G0099900 chr13 - View
Rhododendron simsii Rhsim01G0211400 chr01 + View
Salvia bowleyana SalBow3G2793 GWHASIU00000006 + View
Sequoiadendron giganteum SEGI_32844 chr7 + View
Solanum lycopersicum Solyc11g066260.2 Vacuolar sorting-associated protein 24-like (AHRD V3.3 *** A0A2K3P7F2_TRIPR) SL4.0ch11 - View
Solanum lycopersicum Solyc06g074840.3 Vacuolar sorting-associated protein 24-like (AHRD V3.3 *** A0A2K3P7F2_TRIPR) SL4.0ch06 + View
Schrenkiella parvula Sp6g22440 K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) ch6-6 - View
Solanum pennellii Sopen06g031270 VPS24.1 | CONTAINS InterPro DOMAIN/s: Snf7 | BEST Arabidopsis thaliana protein match is: SNF7 family protein Spenn-ch06 + View
Solanum pennellii Sopen11g026000 VPS24.1 | CONTAINS InterPro DOMAIN/s: Snf7 | BEST Arabidopsis thaliana protein match is: SNF7 family protein Spenn-ch11 - View
Solanum tuberosum PGSC0003DMG400007136 SNF7 family protein ST4.03ch06 + View
Solanum tuberosum PGSC0003DMG400000449 SNF7 family protein ST4.03ch11 - View
Trochodendron aralioides TAR636G2234 group1 - View
Theobroma cacao Thecc.10G085700 Vacuolar protein sorting-associated protein 24 Chromosome_10 - View
Theobroma cacao Thecc.09G349700 SNF7 family protein Chromosome_9 - View
Tarenaya hassleriana THA.LOC104799520 vacuolar protein sorting-associated protein 24 homolog 1 NW_010968505.1 - View
Tarenaya hassleriana THA.LOC104810876 vacuolar protein sorting-associated protein 24 homolog 1-like NW_010965304.1 - View
Tripterygium wilfordii TWI31G0037 NC_052233.1 - View
Tripterygium wilfordii TWI79G0911 NC_052238.1 - View
Vaccinium macrocarpon vmacro03261 Similar to VPS24-1: Vacuolar protein sorting-associated protein 24 homolog 1 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1127G1114 CM024076.1 - View
Vitis vinifera GSVIVG01031487001 chr6 - View