Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0007747 hypothetical protein glysoja_025387 [Glycine soja] Chr10 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G10680 LG-4 - View
Acer truncatum Atru.chr11.1972 chr11 + View
Actinidia chinensis Actinidia15013 Lachesis_group12 + View
Actinidia chinensis Actinidia27772 Lachesis_group10 + View
Actinidia chinensis Actinidia08178 Lachesis_group15 + View
Arabidopsis lyrata AL2G29530 scaffold_2 + View
Avicennia marina MSTRG.13380 ScioBoG_18778_HRSCAF_18863 - View
Aquilegia oxysepala Aqoxy3G03070 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MDT0NR PTHR32285:SF28 - PROTEIN ALTERED XYLOGLUCAN 4-LIKE arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.87AMRL PTHR32285//PTHR32285:SF57 - FAMILY NOT NAMED // PROTEIN ALTERED XYLOGLUCAN 4 arahy.Tifrunner.gnm1.Arahy.15 - View
Arabidopsis thaliana AT1G70230 TRICHOME BIREFRINGENCE-LIKE 27 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. A putative xyloglucan O-acetyltransferase. TBL gene family has 46 members%2C two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose%2C presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff %26 Wolf Scheible%2C 2010%2C personal communication). TRICHOME BIREFRINGENCE-LIKE 27 (TBL27)%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231%2C plant (InterPro:IPR004253)%3B BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 25 (TAIR:AT1G01430.1)%3B Has 1336 Blast hits to 1321 proteins in 30 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 1329%3B Viruses - 0%3B Other Eukaryotes - 5 (source: NCBI BLink). Chr1 + View
Amborella trichopoda ATR1149G036 AmTr_v1.0_scaffold00088 - View
Brassica carinata BcaB05g24542 ChrB05 + View
Brassica carinata BcaC08g46469 ChrC08 + View
Brassica carinata BcaC08g45833 ChrC08 - View
Brassica carinata BcaB03g15536 ChrB03 + View
Brassica napus C06p36200 C06 - View
Brassica napus A07p31150 A07 - View
Brassica napus C06p44080 C06 + View
Brassica napus A07p36680 A07 + View
Brassica oleracea BolC6t39482H C6 + View
Brassica oleracea BolC6t38740H C6 - View
Brassica rapa BraA07t31236Z A07 + View
Beta vulgaris EL10Ac6g13620 PTHR32285//PTHR32285:SF57 - FAMILY NOT NAMED // PROTEIN ALTERED XYLOGLUCAN 4 Chr6_EL10_PGA_scaffold0 + View
Capsicum annuum CAN.G206.51 PGAv.1.6.scaffold206 - View
Cannabis sativa CANSAT01G1548 NC_044373.1 + View
Cicer arietinum L. Ca_04622_v3 Ca_LG2_v3 - View
Corylus avellana Haze_14636 Similar to AXY4L: Protein ALTERED XYLOGLUCAN 4-like (Arabidopsis thaliana OX%3D3702) 5 + View
Corylus avellana Haze_12159 Similar to AXY4: Protein ALTERED XYLOGLUCAN 4 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc07_g02520 TRICHOME BIREFRINGENCE-LIKE 22 chr7 - View
Coffea canephora Cc11_g14340 TRICHOME BIREFRINGENCE-LIKE 27 chr11 + View
Citrus clementina Ciclev10015360m.g scaffold_2 + View
Citrus clementina Ciclev10033419m.g scaffold_4 - View
Carpinus fangiana Cfa009128 Cfa03 - View
Cardamine hirsuta CARHR063350 TRICHOME BIREFRINGENCE-LIKE 27 Chr2 + View
Carya illinoinensis CiPaw.03G035500 PTHR32285:SF28 - PROTEIN ALTERED XYLOGLUCAN 4-LIKE Chr03 + View
Citrullus lanatus ClCG10G014470 TRICHOME BIREFRINGENCE-LIKE 22 LENGTH=414 CG_Chr10 - View
Citrullus lanatus ClCG05G025110 TRICHOME BIREFRINGENCE-LIKE 27 LENGTH=416 CG_Chr05 + View
Cucumis melo MELO3C012018.2 protein ALTERED XYLOGLUCAN 4 chr10 + View
Cucumis melo MELO3C009930.2 Trichome birefringence-like 22, putative chr04 - View
Chenopodium quinoa AUR62005319 AXY4: Protein ALTERED XYLOGLUCAN 4 C_Quinoa_Scaffold_1214 + View
Capsella rubella Carub.0002s1693 PTHR32285//PTHR32285:SF57 - FAMILY NOT NAMED // PROTEIN ALTERED XYLOGLUCAN 4 scaffold_2 + View
Cucumis sativus L. CsaV3_5G031790 Protein trichome birefringence-like chr5 - View
Cucumis sativus L. CsaV3_3G042110 Trichome birefringence-like family chr3 + View
Davidia involucrata Dinv24895 GWHABJS00000018 - View
Davidia involucrata Dinv33519 GWHABJS00000014 - View
Durio zibethinus Duzib248G0065 NW_019168048.1 - View
Durio zibethinus Duzib268G1079 NW_019168270.1 + View
Durio zibethinus Duzib147G0040 NW_019168470.1 + View
Erigeron canadensis ECA233G0671 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.I01832 Chr09 - View
Eucalyptus grandis Eucgr.B03363 Chr02 + View
Erythranthe guttata Migut.H00148 scaffold_8 - View
Fragaria x ananassa FAN05G3581 PTHR32285//PTHR32285:SF28 - FAMILY NOT NAMED // PROTEIN ALTERED XYLOGLUCAN 4-LIKE Fvb6-3 - View
Fragaria x ananassa FAN22G0983 PTHR32285//PTHR32285:SF57 - FAMILY NOT NAMED // PROTEIN ALTERED XYLOGLUCAN 4 Fvb4-1 - View
Fragaria x ananassa FAN12G0970 PTHR32285:SF57 - PROTEIN ALTERED XYLOGLUCAN 4 Fvb4-3 + View
Fragaria x ananassa FAN17G1627 PTHR32285:SF57 - PROTEIN ALTERED XYLOGLUCAN 4 Fvb4-2 + View
Fragaria x ananassa FAN02G1979 PTHR32285:SF28 - PROTEIN ALTERED XYLOGLUCAN 4-LIKE Fvb6-4 + View
Fragaria x ananassa FAN07G0583 PTHR32285//PTHR32285:SF57 - FAMILY NOT NAMED // PROTEIN ALTERED XYLOGLUCAN 4 Fvb4-4 + View
Fragaria vesca FvH4_4g34920 PTHR32285:SF57 - PROTEIN ALTERED XYLOGLUCAN 4 Fvb4 - View
Fragaria vesca FvH4_6g50300 PTHR32285:SF28 - PROTEIN ALTERED XYLOGLUCAN 4-LIKE Fvb6 + View
Gossypium hirsutum Gohir.A05G361200 PTHR32285:SF28 - PROTEIN ALTERED XYLOGLUCAN 4-LIKE A05 - View
Gossypium hirsutum Gohir.D02G165100 PTHR32285//PTHR32285:SF57 - FAMILY NOT NAMED // PROTEIN ALTERED XYLOGLUCAN 4 D02 - View
Gossypium hirsutum Gohir.A03G141900 PTHR32285//PTHR32285:SF57 - FAMILY NOT NAMED // PROTEIN ALTERED XYLOGLUCAN 4 A03 - View
Gossypium hirsutum Gohir.D04G053000 PTHR32285:SF28 - PROTEIN ALTERED XYLOGLUCAN 4-LIKE D04 + View
Glycine max Glyma.19G012100 PTHR32285:SF28 - PROTEIN ALTERED XYLOGLUCAN 4-LIKE Gm19 - View
Glycine max Glyma.02G031100 PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) Gm02 + View
Glycine max Glyma.08G290300 PTHR32285//PTHR32285:SF57 - FAMILY NOT NAMED // PROTEIN ALTERED XYLOGLUCAN 4 Gm08 - View
Glycine max Glyma.01G034300 PTHR32285//PTHR32285:SF57 - FAMILY NOT NAMED // PROTEIN ALTERED XYLOGLUCAN 4 Gm01 - View
Gossypium raimondii Gorai.005G185000 Chr05 - View
Gossypium raimondii Gorai.012G059500 Chr12 + View
Helianthus annuus HanXRQChr08g0209001 Probable TRICHOME BIREFRINGENCE-LIKE 27 HanXRQChr08 - View
Lupinus albus Lalb_Chr05g0217111 PTHR32285:SF57 - PROTEIN ALTERED XYLOGLUCAN 4 Lalb_Chr05 - View
Lupinus albus Lalb_Chr09g0326461 PTHR32285//PTHR32285:SF57 - FAMILY NOT NAMED // PROTEIN ALTERED XYLOGLUCAN 4 Lalb_Chr09 - View
Lotus japonicus Lj2g0003835 PTHR32285//PTHR32285:SF57 - FAMILY NOT NAMED // PROTEIN ALTERED XYLOGLUCAN 4 chr2 - View
Lonicera japonica Lj6P801T34 GWHAAZE00000006 + View
Lonicera japonica Lju41A32G60 GWHAAZE00000094 + View
Malus domestica MD17G1038700 TRICHOME BIREFRINGENCE-LIKE 22 Chr17 - View
Malus domestica MD13G1087900 TRICHOME BIREFRINGENCE-LIKE 27 Chr13 + View
Malus domestica MD16G1088200 TRICHOME BIREFRINGENCE-LIKE 27 Chr16 + View
Malus domestica MD09G1037300 TRICHOME BIREFRINGENCE-LIKE 22 Chr09 - View
Manihot esculenta Manes.05G090300 Chromosome05 - View
Manihot esculenta Manes.01G197400 Chromosome01 + View
Medicago truncatula Medtr5g035070 Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein chr5 - View
Oryza sativa ssp. japonica Os09g0375300 Similar to predicted protein. chr09 + View
Petunia axillaris Peaxi162Scf00129g00941 TRICHOME BIREFRINGENCE-LIKE 22 Peaxi162Scf00129 + View
Punica granatum PGR102G0695 NC_045129.1 - View
Punica granatum PGR142G0071 NC_045128.1 + View
Prunus persica Prupe.3G280300 PTHR32285:SF28 - PROTEIN ALTERED XYLOGLUCAN 4-LIKE Pp03 + View
Prunus persica Prupe.1G258400 PTHR32285:SF57 - PROTEIN ALTERED XYLOGLUCAN 4 Pp01 - View
Pisum sativum Psat1g060680 GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p chr1LG6 + View
Papaver somniferum PSO832G4456 NC_039367.1 - View
Papaver somniferum PSO017G1351 NC_039362.1 + View
Papaver somniferum PSO478G3153 NC_039361.1 + View
Populus trichocarpa Potri.017G073700 PTHR32285:SF28 - PROTEIN ALTERED XYLOGLUCAN 4-LIKE Chr17 - View
Phaseolus vulgaris Phvul.002G073600 Chr02 - View
Quercus lobata QL02p077640 CM012294 - View
Quercus lobata QL03p062189 3 + View
Rosa chinensis RcHm_v2.0_Chr2g0170621 RcHm_v2.0_Chr2 + View
Rosa chinensis RcHm_v2.0_Chr4g0444361 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim12G0048400 chr12 - View
Rhododendron simsii Rhsim12G0123200 chr12 - View
Striga asiatica SGA_v2.0_scaffold87G27007 scaffold87 + View
Salvia bowleyana SalBow8G0532 GWHASIU00000004 - View
Salix brachista Sabra17G0064500 GWHAAZH00000017 - View
Simmondsia chinensis Sc14g0008560 GWHAASQ00000014 + View
Sechium edule Sed0021650 LG04 - View
Sechium edule Sed0006685 LG06 + View
Solanum lycopersicum Solyc02g087120.4 Protein ALTERED XYLOGLUCAN 4-like (AHRD V3.3 *-* A0A2G3D9F7_CAPCH) SL4.0ch02 - View
Solanum pennellii Sopen02g031870 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff, Wolf Scheible, 2010, personal communication). | TRICHOME BIREFRINGENCE-LIKE 22 (TBL22) | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant | BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 19 Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400000530 Leaf senescence protein ST4.03ch02 + View
Selenicereus undatus Hund25323 Scaffold_3410 + View
Selenicereus undatus Hund05967 Scaffold_19641 + View
Trochodendron aralioides TAR622G0645 group8 + View
Trochodendron aralioides TAR629G1712 group0 + View
Trochodendron aralioides TAR374G0499 group12 + View
Theobroma cacao Thecc.04G004800 Trichome birefringence-like 22 Chromosome_4 + View
Theobroma cacao Thecc.02G247900 Trichome birefringence-like 27 Chromosome_2 - View
Trifolium pratense TPR.G2317 Tp57577_TGAC_v2_LG2 - View
Tripterygium wilfordii TWI18G0544 NC_052241.1 + View
Tripterygium wilfordii TWI75G0341 NC_052253.1 - View
Vigna mungo VMungo1215G0159 CM024074.1 + View
Vigna mungo VMungo0464G0286 CM024077.1 - View
Vitis vinifera GSVIVG01032519001 chr14 - View