Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr5.919 chr5 + View
Actinidia chinensis Actinidia16889 Lachesis_group12 + View
Actinidia chinensis Actinidia17939 Lachesis_group24 - View
Actinidia chinensis Actinidia35502 Lachesis_group2 + View
Amaranthus hybridus Ah.06g196300 AmaHy_arrow1_Scaffold_6 - View
Aquilegia oxysepala Aqoxy5G02749 CHR05 - View
Aquilegia oxysepala Aqoxy2G02590 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SYXA4Q PTHR31375//PTHR31375:SF43 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN arahy.Tifrunner.gnm1.Arahy.16 - View
Arabidopsis thaliana AT1G56710 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: stem%2C embryo%2C leaf whorl%2C sepal%2C pedicel%3B EXPRESSED DURING: 4 anthesis%2C C globular stage%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectin lyase fold (InterPro:IPR012334)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G02460.1)%3B Has 4176 Blast hits to 4154 proteins in 491 species: Archae - 6%3B Bacteria - 1245%3B Metazoa - 14%3B Fungi - 1278%3B Plants - 1491%3B Viruses - 0%3B Other Eukaryotes - 142 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR0693G423 AmTr_v1.0_scaffold00003 + View
Brassica carinata BcaC04g22078 ChrC04 - View
Brassica carinata BcaB07g31139 ChrB07 - View
Brassica napus A09p18920 A09 + View
Brassica napus C09p23750 C09 + View
Brassica oleracea BolC9t55299H C9 + View
Brassica rapa BraA09t37512Z A09 + View
Beta vulgaris EL10Ac4g09529 PTHR31375//PTHR31375:SF13 - FAMILY NOT NAMED // PECTIN LYASE-LIKE PROTEIN Chr4_EL10_PGA_scaffold1 - View
Beta vulgaris EL10As5g23590 PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Scaffold_0005 + View
Cannabis sativa CANSAT25G3798 NC_044370.1 - View
Corylus avellana Haze_04021 Similar to At1g48100: Polygalacturonase At1g48100 (Arabidopsis thaliana OX%3D3702) 2 + View
Corylus avellana Haze_05108 Similar to At1g48100: Polygalacturonase At1g48100 (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc02_g35490 Polygalacturonase At1g48100 chr2 - View
Citrus clementina Ciclev10024556m.g scaffold_3 - View
Ceratophyllum demersum CDE09G0551 7 + View
Ceratophyllum demersum CDE08G0755 6 + View
Carpinus fangiana Cfa006737 Cfa02 - View
Cardamine hirsuta CARHR054800 Pectin lyase-like protein Chr2 + View
Carya illinoinensis CiPaw.07G122300 PTHR31375//PTHR31375:SF43 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Chr07 - View
Carya illinoinensis CiPaw.07G033900 PTHR31375:SF13 - PECTIN LYASE-LIKE PROTEIN Chr07 - View
Citrullus lanatus ClCG01G010770 Pectin lyase-like superfamily protein LENGTH=456 CG_Chr01 + View
Cucumis melo MELO3C012916.2 polygalacturonase At1g48100 chr04 + View
Corchorus olitorius COL.COLO4_05495 Glycoside hydrolase%2C family 28 AWUE01012366.1 - View
Chenopodium quinoa AUR62024577 At1g48100: Polygalacturonase At1g48100 C_Quinoa_Scaffold_1992 + View
Chenopodium quinoa AUR62000446 At1g48100: Polygalacturonase At1g48100 C_Quinoa_Scaffold_2088 - View
Chenopodium quinoa AUR62006794 At1g48100: Polygalacturonase At1g48100 C_Quinoa_Scaffold_3429 - View
Chenopodium quinoa AUR62011744 At1g48100: Polygalacturonase At1g48100 C_Quinoa_Scaffold_2008 + View
Daucus carota DCAR_005272 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv24493 GWHABJS00000005 + View
Davidia involucrata Dinv30928 GWHABJS00000002 - View
Durio zibethinus Duzib177G0822 NW_019168004.1 - View
Durio zibethinus Duzib138G1018 NW_019167893.1 + View
Eucalyptus grandis Eucgr.B01677 Chr02 + View
Eucalyptus grandis Eucgr.H01308 Chr08 + View
Erythranthe guttata Migut.N00961 scaffold_14 - View
Fragaria x ananassa FAN09G4300 PTHR31375//PTHR31375:SF13 - FAMILY NOT NAMED // PECTIN LYASE-LIKE PROTEIN Fvb6-2 + View
Fragaria x ananassa FAN02G0707 PTHR31375:SF13 - PECTIN LYASE-LIKE PROTEIN Fvb6-4 - View
Fragaria x ananassa FAN14G4244 PTHR31375:SF13 - PECTIN LYASE-LIKE PROTEIN Fvb6-1 + View
Fragaria vesca FvH4_6g08130 PTHR31375//PTHR31375:SF13 - FAMILY NOT NAMED // PECTIN LYASE-LIKE PROTEIN Fvb6 - View
Gossypium hirsutum Gohir.D02G062100 3.2.1.15 - Polygalacturonase / Pectinase D02 + View
Gossypium hirsutum Gohir.D13G183800 PTHR31375:SF13 - PECTIN LYASE-LIKE PROTEIN D13 - View
Gossypium hirsutum Gohir.A13G177250 PTHR31375:SF13 - PECTIN LYASE-LIKE PROTEIN A13 - View
Gossypium hirsutum Gohir.A02G085800 3.2.1.15 - Polygalacturonase / Pectinase A02 + View
Gossypium hirsutum Gohir.A11G106900 PTHR31375//PTHR31375:SF43 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN A11 + View
Gossypium hirsutum Gohir.D12G125700 PTHR31375//PTHR31375:SF43 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN D12 + View
Glycine max Glyma.19G226500 PTHR31375:SF13 - PECTIN LYASE-LIKE PROTEIN Gm19 + View
Glycine max Glyma.19G219700 PTHR31375//PTHR31375:SF43 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Gm19 - View
Glycine max Glyma.10G144900 PTHR31375//PTHR31375:SF43 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Gm10 + View
Glycine max Glyma.03G222500 PTHR31375//PTHR31375:SF43 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Gm03 - View
Gossypium raimondii Gorai.007G120000 Chr07 + View
Gossypium raimondii Gorai.013G209100 Chr13 - View
Lupinus albus Lalb_Chr02g0147651 PTHR31375:SF13 - PECTIN LYASE-LIKE PROTEIN Lalb_Chr02 + View
Lotus japonicus Lj1g0001225 PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN chr1 - View
Lonicera japonica Lj5A322T68 GWHAAZE00000005 + View
Malus domestica MD04G1189500 Pectin lyase-like superfamily protein Chr04 + View
Manihot esculenta Manes.08G108800 Chromosome08 + View
Manihot esculenta Manes.05G011500 Chromosome05 - View
Manihot esculenta Manes.03G209900 Chromosome03 + View
Manihot esculenta Manes.01G232400 Chromosome01 - View
Nelumbo nucifera Nn3g21854 chr3 - View
Nelumbo nucifera Nn4g25433 chr4 + View
Nicotiana tabacum Nitab4.5_0002783g0040 Pectin lyase fold, Pectin lyase fold/virulence factor, Glycoside hydrolase, family 28, Parallel beta-helix repeat Nitab4.5_0002783 + View
Petunia axillaris Peaxi162Scf00357g00524 Pectin lyase-like superfamily protein Peaxi162Scf00357 + View
Punica granatum PGR004G0043 NC_045131.1 - View
Punica granatum PGR031G2981 NC_045127.1 + View
Prunus persica Prupe.6G307200 PTHR31375:SF13 - PECTIN LYASE-LIKE PROTEIN Pp06 + View
Pisum sativum Psat6g159560 Glycosyl hydrolases family 28 chr6LG2 + View
Papaver somniferum PSO761G0217 NW_020622381.1 + View
Populus trichocarpa Potri.002G190600 PTHR31375//PTHR31375:SF43 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Chr02 + View
Populus trichocarpa Potri.005G005500 PTHR31375:SF13 - PECTIN LYASE-LIKE PROTEIN Chr05 + View
Populus trichocarpa Potri.013G005000 PTHR31375:SF13 - PECTIN LYASE-LIKE PROTEIN Chr13 + View
Populus trichocarpa Potri.014G115700 PTHR31375//PTHR31375:SF43 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Chr14 + View
Phaseolus vulgaris Phvul.001G215900 Chr01 - View
Quercus lobata QL03p012940 3 + View
Quercus lobata QL03p008969 3 - View
Rhododendron simsii Rhsim11G0099500 chr11 - View
Striga asiatica SGA_v2.0_scaffold80G25703 scaffold80 + View
Salvia bowleyana SalBow3G0533 GWHASIU00000006 + View
Salix brachista Sabra13G0004000 GWHAAZH00000013 + View
Simmondsia chinensis Sc16g0009280 GWHAASQ00000016 - View
Solanum lycopersicum Solyc01g100980.4 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1LK87_ARTAN) SL4.0ch01 - View
Solanum pennellii Sopen01g044440 Pectin lyase-like superfamily protein | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: carbohydrate metabolic process | EXPRESSED IN: stem, root, stamen, seed | EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Glycoside hydrolase, family 28 , Pectin lyase fold , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400002749 Polygalacturonase ST4.03ch01 - View
Trochodendron aralioides TAR362G0230 group17 - View
Theobroma cacao Thecc.05G327300 Pectin lyase-like superfamily protein Chromosome_5 - View
Theobroma cacao Thecc.01G321100 Pectin lyase-like superfamily protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104816847 polygalacturonase At1g48100 NW_010965869.1 + View
Tripterygium wilfordii TWI12G0928 NC_052243.1 + View
Tripterygium wilfordii TWI36G0163 NC_052237.1 + View
Vaccinium macrocarpon vmacro01594 Similar to At1g48100: Polygalacturonase At1g48100 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G2028 CM024070.1 - View
Vitis vinifera GSVIVG01028189001 chr7 - View
Vitis vinifera GSVIVG01031298001 chr14 + View