Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0002860 hypothetical protein PRUPE_ppa006186mg [Prunus persica] Chr5 + View
CSS0018929 PREDICTED: UBA and UBX domain-containing protein At4g15410 [Nelumbo nucifera] Chr7 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G9900 LG-9 - View
Aethionema arabicum Aa31LG6G4300 LG-6 - View
Acer truncatum Atru.chr6.3241 chr6 - View
Acer truncatum Atru.chr10.2284 chr10 - View
Actinidia chinensis Actinidia02337 Lachesis_group20 - View
Actinidia chinensis Actinidia26884 Lachesis_group0 - View
Arabidopsis lyrata AL7G31540 scaffold_7 + View
Arabidopsis lyrata AL6G47830 scaffold_6 + View
Avicennia marina MSTRG.7180 ScioBoG_102840_HRSCAF_103099 - View
Amaranthus hybridus Ah.14g087840 Plant UBX domain-containing protein 3 (PUX3) (CDC48-interacting UBX-domain protein 3) AmaHy_arrow1_Scaffold_14 + View
Amaranthus hybridus Ah.09g234510 Plant UBX domain-containing protein 4 (PUX4) (CDC48-interacting UBX-domain protein 4) AmaHy_arrow1_Scaffold_9 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0R8S6T K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) arahy.Tifrunner.gnm1.Arahy.07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8B4PAD K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) arahy.Tifrunner.gnm1.Arahy.04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CB7RQG K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.2A7RP8 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) arahy.Tifrunner.gnm1.Arahy.11 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.P08TCF K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) arahy.Tifrunner.gnm1.Arahy.14 - View
Arabidopsis thaliana AT4G22150 UBA/UBX domain protein Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX3) plant UBX domain-containing protein 3 (PUX3)%3B INVOLVED IN: biological_process unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012)%2C SEP domain (InterPro:IPR012989)%3B BEST Arabidopsis thaliana protein match is: plant UBX domain containing protein 4 (TAIR:AT4G04210.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT4G04210 plant UBX domain containing protein 4 Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX4) plant UBX domain containing protein 4 (PUX4)%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012)%2C SEP domain (InterPro:IPR012989)%3B BEST Arabidopsis thaliana protein match is: plant UBX domain-containing protein 3 (TAIR:AT4G22150.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaC09g51157 ChrC09 + View
Brassica carinata BcaB01g02602 ChrB01 - View
Brassica carinata BcaC04g21281 ChrC04 + View
Brassica carinata BcaB01g01798 ChrB01 + View
Brassica carinata BcaNung03759 Contig1284 + View
Brassica napus C01p16330 C01 - View
Brassica napus C03p36210 C03 + View
Brassica napus A01p13500 A01 - View
Brassica napus C09p33610 C09 - View
Brassica napus A03p29920 A03 + View
Brassica napus A09p26420 A09 - View
Brassica oleracea BolC3t15930H C3 + View
Brassica oleracea BolC1t01584H C1 - View
Brassica oleracea BolC9t56195H C9 - View
Brassica rapa BraA03t12181Z A03 + View
Brassica rapa BraA01t01291Z A01 - View
Beta vulgaris EL10Ac8g20130 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) Chr8_EL10_PGA_scaffold4 - View
Capsicum annuum CAN.G1014.48 PGAv.1.6.scaffold1014 - View
Cannabis sativa CANSAT56G0981 NC_044371.1 + View
Cicer arietinum L. Ca_00693_v3 Ca_LG1_v3 + View
Corylus avellana Haze_12780 Similar to PUX5: Plant UBX domain-containing protein 5 (Arabidopsis thaliana OX%3D3702) 5 + View
Corylus avellana Haze_06857 Similar to PUX4: Plant UBX domain-containing protein 4 (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc09_g01180 UBA and UBX domain-containing protein At4g15410 chr9 + View
Coffea canephora Cc05_g03180 Putative plant UBX domain containing protein 4 chr5 + View
Citrus clementina Ciclev10015438m.g scaffold_2 - View
Citrus clementina Ciclev10016067m.g scaffold_2 - View
Carpinus fangiana Cfa014328 Cfa06 + View
Carpinus fangiana Cfa000161 Cfa01 + View
Cardamine hirsuta CARHR253300 UBX domain-containing protein, putative Chr8 - View
Cardamine hirsuta CARHR228980 UBX domain-containing protein, putative Chr7 - View
Carya illinoinensis CiPaw.09G098100 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) Chr09 - View
Carya illinoinensis CiPaw.10G074600 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) Chr10 - View
Carya illinoinensis CiPaw.03G156700 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) Chr03 + View
Citrullus lanatus ClCG01G009710 NSFL1 cofactor p47, putative CG_Chr01 - View
Cucumis melo MELO3C019307.2 Plant UBX domain-containing protein 4 chr11 - View
Cucumis melo MELO3C021721.2 Plant UBX domain-containing protein 4 chr12 + View
Corchorus olitorius COL.COLO4_31832 hypothetical protein AWUE01020876.1 - View
Carica papaya Cpa.g.sc132.9 supercontig_132 - View
Chenopodium quinoa AUR62021900 PUX4: Plant UBX domain-containing protein 4 C_Quinoa_Scaffold_1862 + View
Chenopodium quinoa AUR62012758 PUX4: Plant UBX domain-containing protein 4 C_Quinoa_Scaffold_2715 - View
Capsella rubella Carub.0006s3212 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) scaffold_6 + View
Capsella rubella Carub.0007s1917 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) scaffold_7 + View
Cucumis sativus L. CsaV3_1G046080 UBX domain containing protein chr1 + View
Daucus carota DCAR_030889 hypothetical protein DCARv2_Chr9 + View
Davidia involucrata Dinv20107 GWHABJS00000020 - View
Davidia involucrata Dinv08731 GWHABJS00000013 + View
Davidia involucrata Dinv39741 GWHABJS00000001 - View
Davidia involucrata Dinv13939 GWHABJS00000016 - View
Durio zibethinus Duzib160G0363 NW_019168015.1 - View
Durio zibethinus Duzib192G0881 NW_019168037.1 + View
Durio zibethinus Duzib235G0115 NW_019167982.1 - View
Erigeron canadensis ECA236G4610 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA236G4794 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.E03986 Chr05 - View
Eucalyptus grandis Eucgr.A01098 Chr01 + View
Erythranthe guttata Migut.M01370 scaffold_13 + View
Eutrema salsugineum Thhalv10025821m.g K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) scaffold_1 + View
Eutrema salsugineum Thhalv10028833m.g K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) scaffold_3 - View
Fragaria x ananassa FAN09G3282 PTHR23333:SF26 - UBX DOMAIN-CONTAINING PROTEIN Fvb6-2 - View
Fragaria x ananassa FAN25G3859 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) Fvb3-1 - View
Fragaria x ananassa FAN02G0342 PTHR23333//PTHR23333:SF26 - UBX DOMAIN CONTAINING PROTEIN // UBX DOMAIN-CONTAINING PROTEIN Fvb6-4 + View
Fragaria x ananassa FAN21G2569 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) Fvb3-2 - View
Fragaria x ananassa FAN14G5477 PTHR23333//PTHR23333:SF26 - UBX DOMAIN CONTAINING PROTEIN // UBX DOMAIN-CONTAINING PROTEIN Fvb6-1 - View
Fragaria x ananassa FAN05G0472 PTHR23333:SF26 - UBX DOMAIN-CONTAINING PROTEIN Fvb6-3 - View
Fragaria vesca FvH4_3g01390 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) Fvb3 + View
Fragaria vesca FvH4_6g42560 PTHR23333//PTHR23333:SF26 - UBX DOMAIN CONTAINING PROTEIN // UBX DOMAIN-CONTAINING PROTEIN Fvb6 + View
Gossypium hirsutum Gohir.D05G176200 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) D05 - View
Gossypium hirsutum Gohir.A05G173200 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) A05 - View
Glycine max Glyma.09G007600 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) Gm09 - View
Glycine max Glyma.15G112000 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) Gm15 - View
Gossypium raimondii Gorai.009G181600 Chr09 - View
Helianthus annuus HanXRQChr15g0470811 Probable plant UBX domain containing protein 4 HanXRQChr15 + View
Hydrangea macrophylla Hma1.2p1_0298F.1_g117460 Hma1.2p1_0298F.1 + View
Lupinus albus Lalb_Chr20g0118961 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) Lalb_Chr20 - View
Lupinus albus Lalb_Chr15g0087761 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) Lalb_Chr15 - View
Lotus japonicus Lj4g0001049 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) chr4 - View
Lotus japonicus Lj6g0024413 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) chr6 - View
Lonicera japonica Lj8A129T92 GWHAAZE00000008 - View
Lonicera japonica Lj1C1236T13 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_7_14940 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) Lsat_1_v8_lg_7 + View
Malus domestica MD10G1326800 plant UBX domain containing protein 4 Chr10 - View
Malus domestica MD17G1102700 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma Chr17 - View
Malus domestica MD09G1112600 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma Chr09 - View
Malus domestica MD05G1352600 plant UBX domain-containing protein 3 Chr05 - View
Manihot esculenta Manes.13G067300 Chromosome13 + View
Manihot esculenta Manes.16G002900 Chromosome16 + View
Manihot esculenta Manes.17G027200 Chromosome17 + View
Medicago truncatula Medtr2g024420 UBA and UBX domain plant protein chr2 + View
Nelumbo nucifera Nn1g07275 chr1 + View
Nicotiana tabacum Nitab4.5_0000005g0010 UBX, SEP domain Nitab4.5_0000005 - View
Olea europaea Oeu051883.1 scaffold601 + View
Petunia axillaris Peaxi162Scf00708g00211 plant UBX domain containing protein 4 Peaxi162Scf00708 + View
Punica granatum PGR042G2348 NC_045130.1 - View
Prunus persica Prupe.3G212000 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) Pp03 + View
Papaver somniferum PSO675G6209 NC_039358.1 - View
Papaver somniferum PSO541G3543 NC_039363.1 + View
Populus trichocarpa Potri.006G270300 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) Chr06 + View
Populus trichocarpa Potri.004G004200 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) Chr04 + View
Populus trichocarpa Potri.002G225800 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) Chr02 + View
Populus trichocarpa Potri.011G011300 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) Chr11 - View
Populus trichocarpa Potri.014G157200 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) Chr14 - View
Phaseolus vulgaris Phvul.006G145600 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) Chr06 + View
Quercus lobata QL08p031047 8 + View
Quercus lobata QL05p071905 5 + View
Rosa chinensis RcHm_v2.0_Chr5g0002041 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim06G0166500 chr06 - View
Striga asiatica SGA_v2.0_scaffold7G03783 scaffold7 - View
Striga asiatica SGA_v2.0_scaffold4G01893 scaffold4 - View
Salvia bowleyana SalBow8G3803 GWHASIU00000004 - View
Salix brachista Sabra04G0002300 GWHAAZH00000004 + View
Salix brachista Sabra14G0119000 GWHAAZH00000014 - View
Salix brachista Sabra02G0172800 GWHAAZH00000002 + View
Salix brachista Sabra11G0008400 GWHAAZH00000011 - View
Simmondsia chinensis Sc05g0009450 GWHAASQ00000005 - View
Sechium edule Sed0009660 LG08 + View
Solanum lycopersicum Solyc02g081140.3 plant UBX domain-containing protein 4 (AHRD V3.3 *** A0A2G3A9D5_CAPAN) SL4.0ch02 - View
Solanum lycopersicum Solyc07g049260.4 plant UBX domain-containing protein 4-like (AHRD V3.3 *** A0A1S3YUP2_TOBAC) SL4.0ch07 - View
Schrenkiella parvula Sp6g04570 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) ch6-1 - View
Schrenkiella parvula Sp7g20310 K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) ch7-4 - View
Solanum pennellii Sopen02g025780 Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX3) | plant UBX domain-containing protein 3 (PUX3) | INVOLVED IN: biological_process unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: UBX , SEP domain | BEST Arabidopsis thaliana protein match is: plant UBX domain containing protein 4 Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400016724 NSFL1 cofactor p47 ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400000670 Phosphatase Psc923 ST4.03ch07 - View
Selenicereus undatus Hund21437 Scaffold_33680 - View
Selenicereus undatus Hund23425 Scaffold_3410 + View
Trochodendron aralioides TAR627G0856 group6 - View
Trochodendron aralioides TAR629G0679 group0 + View
Trochodendron aralioides TAR626G1012 group3 + View
Theobroma cacao Thecc.06G228200 Plant UBX domain containing protein 4 Chromosome_6 - View
Theobroma cacao Thecc.01G180700 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma Chromosome_1 - View
Tarenaya hassleriana THA.LOC104813423 plant UBX domain-containing protein 4-like NW_010960187.1 - View
Trifolium pratense TPR.G13148 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI75G1065 NC_052253.1 - View
Tripterygium wilfordii TWI38G2169 NC_052252.1 + View
Tripterygium wilfordii TWI38G1577 NC_052252.1 + View
Tripterygium wilfordii TWI18G0856 NC_052241.1 + View
Vaccinium macrocarpon vmacro03664 Similar to PUX4: Plant UBX domain-containing protein 4 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro12172 Similar to PUX4: Plant UBX domain-containing protein 4 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0540G1622 CM024075.1 - View
Vitis vinifera GSVIVG01004812001 chr10_random - View
Vitis vinifera GSVIVG01030489001 chr12 - View