Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0019528 Transcription factor bHLH61 isoform 1 [Theobroma cacao] Chr7 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G19120 LG-5 - View
Acer truncatum Atru.chr12.141 chr12 - View
Acer truncatum Atru.chr8.2368 chr8 + View
Actinidia chinensis Actinidia29051 Lachesis_group3 - View
Actinidia chinensis Actinidia11531 Lachesis_group21 - View
Arabidopsis lyrata AL4G38270 scaffold_4 + View
Arabidopsis lyrata AL5G37540 scaffold_5 + View
Avicennia marina MSTRG.18961 ScioBoG_25048_HRSCAF_25167 - View
Avicennia marina MSTRG.27287 ScioBoG_8578_HRSCAF_8617 - View
Avicennia marina MSTRG.5519 ScioBoG_102839_HRSCAF_103093 - View
Aquilegia oxysepala Aqoxy4G02152 CHR04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.C25ZDC arahy.Tifrunner.gnm1.Arahy.02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ENL36S arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.W40KSR arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YDS48V arahy.Tifrunner.gnm1.Arahy.14 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MV2SR8 arahy.Tifrunner.gnm1.Arahy.07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.R5V7VH arahy.Tifrunner.gnm1.Arahy.04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.PE6L90 arahy.Tifrunner.gnm1.Arahy.12 + View
Arabidopsis thaliana AT3G56220 transcription regulator transcription regulators%3B FUNCTIONS IN: transcription regulator activity%3B INVOLVED IN: regulation of transcription%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40435.1)%3B Has 248 Blast hits to 248 proteins in 28 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 248%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT2G40435 transcription factor SCREAM-like protein BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1)%3B Has 289 Blast hits to 289 proteins in 30 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 289%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaC07g39938 ChrC07 + View
Brassica napus A09p49200 A09 + View
Brassica napus C08p31540 C08 + View
Brassica oleracea BolC4t28329H C4 + View
Brassica rapa BraA09t40373Z A09 + View
Brassica rapa BraA07t29948Z A07 + View
Beta vulgaris EL10Ac7g17044 Chr7_EL10_PGA_scaffold5 + View
Cannabis sativa CANSAT35G1960 NC_044378.1 - View
Corylus avellana Haze_24437 Protein of unknown function 6 + View
Corylus avellana Haze_21128 Similar to SCRM2: Transcription factor SCREAM2 (Arabidopsis thaliana OX%3D3702) 10 + View
Corylus avellana Haze_17324 Similar to BHLH61: Transcription factor bHLH61 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc06_g00580 BEST Arabidopsis thaliana protein match is chr6 - View
Coffea canephora Cc02_g05700 BEST Arabidopsis thaliana protein match is chr2 - View
Citrus clementina Ciclev10012991m.g scaffold_6 + View
Citrus clementina Ciclev10032961m.g scaffold_4 + View
Ceratophyllum demersum CDE06G0610 4 + View
Carpinus fangiana Cfa011798 Cfa04 + View
Carpinus fangiana Cfa001237 Cfa01 - View
Cardamine hirsuta CARHR135550 BEST Arabidopsis thaliana protein match is: transcription regulators Chr4 + View
Cardamine hirsuta CARHR166370 DNA binding protein, putative Chr5 + View
Carya illinoinensis CiPaw.01G303700 Chr01 + View
Carya illinoinensis CiPaw.09G217700 Chr09 + View
Carya illinoinensis CiPaw.13G066800 Chr13 - View
Carya illinoinensis CiPaw.02G197500 Chr02 + View
Carya illinoinensis CiPaw.10G163400 Chr10 + View
Citrullus lanatus ClCG04G006520 DNA binding protein, putative CG_Chr04 - View
Citrullus lanatus ClCG11G005870 DNA binding protein, putative CG_Chr11 - View
Cucumis melo MELO3C026050.2 Transcription factor bHLH93-like protein chr08 - View
Cucumis melo MELO3C019989.2 Transcription factor bHLH61-like protein chr03 - View
Corchorus olitorius COL.COLO4_11181 hypothetical protein AWUE01014647.1 + View
Carica papaya Cpa.g.sc19.98 supercontig_19 - View
Chenopodium quinoa AUR62012336 Protein of unknown function C_Quinoa_Scaffold_1995 + View
Chenopodium quinoa AUR62006335 Protein of unknown function C_Quinoa_Scaffold_1001 + View
Chenopodium quinoa AUR62026372 Protein of unknown function C_Quinoa_Scaffold_3298 + View
Capsella rubella Carub.0005s2300 scaffold_5 + View
Cucumis sativus L. CsaV3_4G027000 transcription factor SCREAM2-like chr4 + View
Cucumis sativus L. CsaV3_6G002130 Transcription factor bHLH61-like protein chr6 + View
Davidia involucrata Dinv11395 GWHABJS00000015 + View
Davidia involucrata Dinv25298 GWHABJS00000012 - View
Davidia involucrata Dinv21813 GWHABJS00000004 - View
Durio zibethinus Duzib151G0922 NW_019167904.1 - View
Durio zibethinus Duzib212G0276 NW_019168026.1 - View
Durio zibethinus Duzib168G1504 NW_019168159.1 + View
Erigeron canadensis ECA232G1367 Conyza_canadensis_scaffold:2 + View
Eucalyptus grandis Eucgr.G03115 Chr07 + View
Eucalyptus grandis Eucgr.A00656 Chr01 - View
Eucalyptus grandis Eucgr.K01270 Chr11 + View
Erythranthe guttata Migut.F00580 scaffold_6 + View
Erythranthe guttata Migut.J00069 scaffold_10 - View
Fragaria x ananassa FAN03G0480 Fvb7-3 - View
Fragaria x ananassa FAN21G0770 Fvb3-2 + View
Fragaria x ananassa FAN05G1548 Fvb6-3 - View
Fragaria x ananassa FAN16G1142 Fvb3-3 + View
Fragaria x ananassa FAN14G1740 Fvb6-1 - View
Fragaria x ananassa FAN13G2418 Fvb5-2 + View
Fragaria x ananassa FAN01G1346 Fvb7-4 - View
Fragaria x ananassa FAN02G0637 Fvb6-4 + View
Fragaria x ananassa FAN09G1824 Fvb6-2 - View
Fragaria x ananassa FAN05G5350 Fvb6-3 + View
Fragaria x ananassa FAN10G3114 Fvb7-1 + View
Fragaria x ananassa FAN25G3262 Fvb3-1 - View
Fragaria vesca FvH4_3g40050 Fvb3 + View
Fragaria vesca FvH4_7g25520 Fvb7 + View
Fragaria vesca FvH4_6g10480 Fvb6 + View
Gossypium hirsutum Gohir.A10G148500 A10 + View
Gossypium hirsutum Gohir.A02G005100 A02 - View
Gossypium hirsutum Gohir.D10G118200 D10 - View
Gossypium hirsutum Gohir.D08G221100 D08 + View
Gossypium hirsutum Gohir.A08G203800 A08 + View
Gossypium hirsutum Gohir.D02G005500 D02 - View
Glycine max Glyma.02G259800 Gm02 - View
Glycine max Glyma.14G201300 Gm14 + View
Glycine max Glyma.18G210700 Gm18 + View
Glycine max Glyma.18G055800 Gm18 - View
Glycine max Glyma.11G162500 Gm11 - View
Glycine max Glyma.03G040500 Gm03 - View
Glycine max Glyma.01G129700 Gm01 + View
Glycine max Glyma.11G234800 Gm11 + View
Glycine max Glyma.09G278100 Gm09 - View
Gossypium raimondii Gorai.005G006200 Chr05 - View
Gossypium raimondii Gorai.011G130000 Chr11 - View
Lupinus albus Lalb_Chr07g0190771 Lalb_Chr07 - View
Lupinus albus Lalb_Chr19g0124101 Lalb_Chr19 - View
Lotus japonicus Lj1g0023424 chr1 - View
Lotus japonicus Lj3g0020806 chr3 + View
Lotus japonicus Lj6g0027746 chr6 - View
Lonicera japonica Lj2P63T40 GWHAAZE00000002 - View
Lonicera japonica Lj1P964T16 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_5_151201 Lsat_1_v8_lg_5 + View
Magnolia biondii MBI15_g26251_MAGBIO AED:0.07 Chr15 + View
Malus domestica MD12G1184400 transcription regulators Chr12 + View
Malus domestica MD01G1161700 transcription regulators Chr01 + View
Malus domestica MD04G1170700 transcription regulators Chr04 + View
Malus domestica MD11G1060700 transcription regulators Chr11 + View
Malus domestica MD07G1229600 transcription regulators Chr07 + View
Manihot esculenta Manes.07G139200 Chromosome07 - View
Manihot esculenta Manes.08G172700 Chromosome08 + View
Manihot esculenta Manes.09G115200 Chromosome09 + View
Medicago truncatula Medtr3g466150 transcription factor bHLH93-like protein chr3 + View
Medicago truncatula Medtr7g072470 transcription factor bHLH93-like protein chr7 + View
Nelumbo nucifera Nn2g13309 chr2 - View
Nelumbo nucifera Nn2g11078 chr2 + View
Olea europaea Oeu026965.1 chr1 - View
Oryza sativa ssp. japonica Os03g0338400 Basic helix-loop-helix dimerisation region bHLH domain containing protein. chr03 + View
Oryza sativa ssp. japonica Os12g0111400 Helix-loop-helix DNA-binding domain containing protein. chr12 + View
Oryza sativa ssp. japonica Os07g0676600 HLH (helix-loop-helix) protein, Mediation of defense to brown planthopper (BPH) chr07 + View
Oryza sativa ssp. japonica Os11g0111800 Conserved hypothetical protein. chr11 + View
Oryza sativa ssp. japonica Os05g0337200 Helix-loop-helix DNA-binding domain containing protein. chr05 - View
Petunia axillaris Peaxi162Scf00284g00025 transcription regulators Peaxi162Scf00284 - View
Petunia axillaris Peaxi162Scf00732g00442 transcription regulators Peaxi162Scf00732 - View
Punica granatum PGR044G2016 NC_045134.1 + View
Punica granatum PGR031G1877 NC_045127.1 + View
Prunus persica Prupe.2G259900 Pp02 + View
Prunus persica Prupe.6G045200 Pp06 - View
Prunus persica Prupe.6G289300 Pp06 + View
Papaver somniferum PSO017G6968 NC_039362.1 - View
Papaver somniferum PSO170G1859 NC_039360.1 + View
Populus trichocarpa Potri.006G106900 Chr06 - View
Populus trichocarpa Potri.019G126800 Chr19 + View
Populus trichocarpa Potri.013G154100 Chr13 + View
Populus trichocarpa Potri.016G132600 Chr16 - View
Phaseolus vulgaris Phvul.008G087200 Chr08 - View
Phaseolus vulgaris Phvul.001G248200 Chr01 + View
Phaseolus vulgaris Phvul.006G075400 Chr06 + View
Quercus lobata QL07p033204 7 - View
Quercus lobata QL08p064305 8 + View
Quercus lobata QL01p025528 1 - View
Rosa chinensis RcHm_v2.0_Chr1g0371511 RcHm_v2.0_Chr1 + View
Rosa chinensis RcHm_v2.0_Chr3g0461381 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim03G0149700 chr03 + View
Rhododendron simsii Rhsim05G0228400 chr05 + View
Striga asiatica SGA_v2.0_scaffold85G26655 scaffold85 - View
Striga asiatica SGA_v2.0_scaffold60G20934 scaffold60 - View
Salix brachista Sabra06G0083200 GWHAAZH00000006 - View
Salix brachista Sabra04G0150500 GWHAAZH00000004 - View
Simmondsia chinensis Sc11g0005650 GWHAASQ00000011 + View
Sapria himalayana SHI12906 scaffold11_13529635 + View
Schrenkiella parvula Sp5g06280 ch5-1 - View
Solanum pennellii Sopen06g016530 BEST Arabidopsis thaliana protein match is: transcription regulators Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400027979 DNA binding protein ST4.03ch06 + View
Solanum tuberosum PGSC0003DMG400026576 DNA binding protein ST4.03ch09 + View
Selenicereus undatus Hund15850 Scaffold_33677 - View
Selenicereus undatus Hund19804 Scaffold_33673 - View
Trochodendron aralioides TAR633G1114 group2 + View
Theobroma cacao Thecc.04G156200 Chromosome_4 - View
Theobroma cacao Thecc.09G360600 Uncharacterized protein Chromosome_9 + View
Tripterygium wilfordii TWI09G1078 NC_052245.1 - View
Tripterygium wilfordii TWI77G0034 NC_052236.1 + View
Tripterygium wilfordii TWI74G0938 NC_052234.1 - View
Vaccinium macrocarpon vmacro20349 Similar to SCRM2: Transcription factor SCREAM2 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0647G2060 CM024073.1 + View
Vigna mungo VMungo1383G1922 CM024070.1 - View
Vigna mungo VMungo0331G1689 CM024078.1 + View
Vigna mungo VMungo0540G1439 CM024075.1 - View
Vanilla planifolia HPP92_013853 Transcription factor bHLH61-like protein *** CM028155.1 + View
Vitis vinifera GSVIVG01032720001 chr13 + View
Vitis vinifera GSVIVG01024605001 chr6 + View
Vitis vinifera GSVIVG01030222001 chr8 + View
Zea mays Zm00001eb286720 Zm00001e031535 6 + View
Zea mays Zm00001eb016200 Zm00001e001597 DNA binding protein 1 - View