Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0023825 hypothetical protein POPTR_0006s12905g [Populus trichocarpa] Chr8 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Beta vulgaris EL10Ac3g07083 Chr3_EL10_PGA_scaffold7 - View
Cannabis sativa CANSAT80G2234 NC_044372.1 - View
Cucumis melo MELO3C033244.2 Unknown protein chr08 + View
Cucumis melo MELO3C033215.2 zinc finger BED domain-containing protein RICESLEEPER 2-like chr08 - View
Chenopodium quinoa AUR62019692 Protein of unknown function C_Quinoa_Scaffold_2127 + View
Erigeron canadensis ECA248G2624 Conyza_canadensis_scaffold:9 - View
Fragaria x ananassa FAN02G2917 Fvb6-4 + View
Fragaria vesca FvH4_6g25073 PTHR23272//PTHR23272:SF0 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Fvb6 + View
Papaver somniferum PSO339G5140 NC_039366.1 - View
Quercus lobata QL03p018711 3 + View
Rhododendron simsii Rhsim03G0207300 chr03 + View
Rhododendron simsii Rhsim04G0181200 chr04 + View
Solanum pennellii Sopen07g015380 Putative AC transposase (ORFA) - Zea mays (Maize), transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. | BED zinc finger , hAT family dimerisation domain | CONTAINS InterPro DOMAIN/s: HAT dimerisation , Zinc finger, BED-type predicted | BEST Arabidopsis thaliana protein match is: BED zinc finger , hAT family dimerisation domain Spenn-ch07 + View
Trifolium pratense TPR.G33782 Tp57577_TGAC_v2_LG3 + View